RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 PPP1R37O75864 691 aa16.32■□□□□ 0.2
HFM1-202ENST00000427444 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
HFM1-202ENST00000427444 RIMBP2O15034 1052 aa16.27■□□□□ 0.2
HFM1-202ENST00000427444 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
HFM1-202ENST00000427444 HOXB1P14653 301 aaPredicted RBP16.24■□□□□ 0.19
HFM1-202ENST00000427444 HS3ST6Q96QI5 342 aa16.23■□□□□ 0.19
HFM1-202ENST00000427444 C2orf72A6NCS6 295 aa16.22■□□□□ 0.19
HFM1-202ENST00000427444 POTEB3A0JP26 581 aa16.21■□□□□ 0.19
HFM1-202ENST00000427444 POTEBQ6S5H4 581 aa16.21■□□□□ 0.19
HFM1-202ENST00000427444 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
HFM1-202ENST00000427444 KIF3CO14782 793 aa16.19■□□□□ 0.18
HFM1-202ENST00000427444 TMC2Q8TDI7 906 aa16.18■□□□□ 0.18
HFM1-202ENST00000427444 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
HFM1-202ENST00000427444 ERBB3P21860 1342 aa16.16■□□□□ 0.18
HFM1-202ENST00000427444 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
HFM1-202ENST00000427444 ARSIQ5FYB1 569 aa16.13■□□□□ 0.17
HFM1-202ENST00000427444 GPR153Q6NV75 609 aa16.13■□□□□ 0.17
HFM1-202ENST00000427444 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.171e-12■■■■■ 51.6
HFM1-202ENST00000427444 VARS2Q5ST30 1063 aaKnown RBP16.07■□□□□ 0.16
HFM1-202ENST00000427444 RYDENQ9NUL5 291 aaKnown RBP16.07■□□□□ 0.16
HFM1-202ENST00000427444 KRTAP3-3Q9BYR6 98 aa16.03■□□□□ 0.16
HFM1-202ENST00000427444 KRTAP3-2Q9BYR7 98 aa16.03■□□□□ 0.16
HFM1-202ENST00000427444 SPNS2Q8IVW8 549 aa16■□□□□ 0.15
HFM1-202ENST00000427444 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
HFM1-202ENST00000427444 GTPBP6O43824 516 aaPredicted RBP15.97■□□□□ 0.15
HFM1-202ENST00000427444 NUDT7P0C024 238 aa15.97■□□□□ 0.15
HFM1-202ENST00000427444 PCDHGA4Q9Y5G9 962 aa15.97■□□□□ 0.15
HFM1-202ENST00000427444 SLC34A2O95436 690 aa15.96■□□□□ 0.15
HFM1-202ENST00000427444 PLPP6Q8IY26 295 aa15.95■□□□□ 0.14
HFM1-202ENST00000427444 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
HFM1-202ENST00000427444 FOXK1P85037 733 aa15.94■□□□□ 0.14
HFM1-202ENST00000427444 DSG2Q14126 1118 aa15.93■□□□□ 0.14
HFM1-202ENST00000427444 MMRN1Q13201 1228 aa15.9■□□□□ 0.14
HFM1-202ENST00000427444 ZNF687Q8N1G0 1237 aa15.9■□□□□ 0.14
HFM1-202ENST00000427444 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
HFM1-202ENST00000427444 LHX6Q9UPM6 363 aa15.86■□□□□ 0.13
HFM1-202ENST00000427444 CRISPLD2Q9H0B8 497 aa15.84■□□□□ 0.13
HFM1-202ENST00000427444 PTCD2Q8WV60 388 aaKnown RBP15.83■□□□□ 0.12
HFM1-202ENST00000427444 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
HFM1-202ENST00000427444 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
HFM1-202ENST00000427444 PDE4AP27815 886 aa15.8■□□□□ 0.12
HFM1-202ENST00000427444 PPP1R15BQ5SWA1 713 aa15.79■□□□□ 0.12
HFM1-202ENST00000427444 TBC1D12O60347 775 aa15.77■□□□□ 0.12
HFM1-202ENST00000427444 UPF1Q92900 1129 aaKnown RBP eCLIP15.76■□□□□ 0.11
HFM1-202ENST00000427444 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
HFM1-202ENST00000427444 KDM4FA0A1W2PPD8 638 aa15.73■□□□□ 0.11
HFM1-202ENST00000427444 ANKRD13DQ6ZTN6 518 aa15.73■□□□□ 0.11
HFM1-202ENST00000427444 BBXQ8WY36 941 aaPredicted RBP15.73■□□□□ 0.11
HFM1-202ENST00000427444 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
HFM1-202ENST00000427444 OXER1Q8TDS5 423 aa15.7■□□□□ 0.1
HFM1-202ENST00000427444 DDX27Q96GQ7 796 aaKnown RBP15.7■□□□□ 0.1
HFM1-202ENST00000427444 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
HFM1-202ENST00000427444 PSDA5PKW4 1024 aaPredicted RBP15.67■□□□□ 0.1
HFM1-202ENST00000427444 PBX2P40425 430 aa15.66■□□□□ 0.1
HFM1-202ENST00000427444 LSM11P83369 360 aaKnown RBP eCLIP15.66■□□□□ 0.1
HFM1-202ENST00000427444 POTEEQ6S8J3 1075 aa15.66■□□□□ 0.1
HFM1-202ENST00000427444 MFSD10Q14728 455 aa15.62■□□□□ 0.09
HFM1-202ENST00000427444 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
HFM1-202ENST00000427444 PPP4R3BQ5MIZ7 849 aa15.6■□□□□ 0.09
HFM1-202ENST00000427444 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.6■□□□□ 0.09
HFM1-202ENST00000427444 RNF166Q96A37 237 aaPredicted RBP15.59■□□□□ 0.09
HFM1-202ENST00000427444 ARHGAP33O14559 1287 aa15.58■□□□□ 0.08
HFM1-202ENST00000427444 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
HFM1-202ENST00000427444 PSEN2P49810 448 aa15.54■□□□□ 0.08
HFM1-202ENST00000427444 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
HFM1-202ENST00000427444 EVI5O60447 810 aa15.53■□□□□ 0.08
HFM1-202ENST00000427444 PTGER2P43116 358 aa15.53■□□□□ 0.08
HFM1-202ENST00000427444 ZNF454Q8N9F8 522 aa15.53■□□□□ 0.08
HFM1-202ENST00000427444 EMILIN3Q9NT22 766 aa15.53■□□□□ 0.08
HFM1-202ENST00000427444 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
HFM1-202ENST00000427444 DMRTA1Q5VZB9 504 aa15.5■□□□□ 0.07
HFM1-202ENST00000427444 PAXIP1Q6ZW49 1069 aaPredicted RBP15.5■□□□□ 0.07
HFM1-202ENST00000427444 KCNK17Q96T54 332 aa15.49■□□□□ 0.07
HFM1-202ENST00000427444 ADGRD1Q6QNK2 874 aa15.47■□□□□ 0.07
HFM1-202ENST00000427444 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
HFM1-202ENST00000427444 FOSBP53539 338 aa15.45■□□□□ 0.06
HFM1-202ENST00000427444 KCNH8Q96L42 1107 aa15.45■□□□□ 0.06
HFM1-202ENST00000427444 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
HFM1-202ENST00000427444 BCL2L12Q9HB09 334 aa15.4■□□□□ 0.06
HFM1-202ENST00000427444 TK2O00142 265 aa15.39■□□□□ 0.05
HFM1-202ENST00000427444 CAMK2BQ13554 666 aa15.39■□□□□ 0.05
HFM1-202ENST00000427444 DPYSL4O14531 572 aa15.37■□□□□ 0.05
HFM1-202ENST00000427444 ZDHHC16Q969W1 377 aa15.37■□□□□ 0.05
HFM1-202ENST00000427444 PTPREP23469 700 aa15.35■□□□□ 0.05
HFM1-202ENST00000427444 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
HFM1-202ENST00000427444 HRO43593 1189 aa15.34■□□□□ 0.05
HFM1-202ENST00000427444 STAC3Q96MF2 364 aa15.33■□□□□ 0.04
HFM1-202ENST00000427444 VPS9D1Q9Y2B5 631 aa15.31■□□□□ 0.04
HFM1-202ENST00000427444 PCDHGA10Q9Y5H3 936 aa15.31■□□□□ 0.04
HFM1-202ENST00000427444 WDR70Q9NW82 654 aa15.26■□□□□ 0.03
HFM1-202ENST00000427444 PHF14O94880 888 aa15.25■□□□□ 0.03
HFM1-202ENST00000427444 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
HFM1-202ENST00000427444 ZBED2Q9BTP6 218 aa15.24■□□□□ 0.03
HFM1-202ENST00000427444 E2F4Q16254 413 aa15.23■□□□□ 0.03
HFM1-202ENST00000427444 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
HFM1-202ENST00000427444 DDX12PQ92771 950 aa15.22■□□□□ 0.03
HFM1-202ENST00000427444 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
HFM1-202ENST00000427444 KCTD12Q96CX2 325 aaKnown RBP15.22■□□□□ 0.03
HFM1-202ENST00000427444 HCSTQ9UBK5 93 aa15.19■□□□□ 0.02
HFM1-202ENST00000427444 COL9A1P20849 921 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms