RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 EEA1Q15075 1411 aa22.85■■□□□ 1.25
VEGFB-202ENST00000426086 PLCH2O75038 1416 aa22.84■■□□□ 1.25
VEGFB-202ENST00000426086 CERKQ8TCT0 537 aa22.83■■□□□ 1.25
VEGFB-202ENST00000426086 ARHGEF12Q9NZN5 1544 aa22.8■■□□□ 1.24
VEGFB-202ENST00000426086 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
VEGFB-202ENST00000426086 ATP10AO60312 1499 aa22.78■■□□□ 1.24
VEGFB-202ENST00000426086 C9orf84Q5VXU9 1444 aa22.75■■□□□ 1.23
VEGFB-202ENST00000426086 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
VEGFB-202ENST00000426086 KIF14Q15058 1648 aa22.74■■□□□ 1.23
VEGFB-202ENST00000426086 MYO5CQ9NQX4 1742 aa22.73■■□□□ 1.23
VEGFB-202ENST00000426086 PREX1Q8TCU6 1659 aa22.72■■□□□ 1.23
VEGFB-202ENST00000426086 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
VEGFB-202ENST00000426086 EFCAB2Q5VUJ9 269 aa22.71■■□□□ 1.23
VEGFB-202ENST00000426086 STRCQ7RTU9 1775 aa22.7■■□□□ 1.22
VEGFB-202ENST00000426086 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
VEGFB-202ENST00000426086 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
VEGFB-202ENST00000426086 KDM5CP41229 1560 aa22.67■■□□□ 1.22
VEGFB-202ENST00000426086 ZNF518AQ6AHZ1 1483 aa22.65■■□□□ 1.22
VEGFB-202ENST00000426086 LRRIQ1Q96JM4 1722 aa22.65■■□□□ 1.22
VEGFB-202ENST00000426086 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
VEGFB-202ENST00000426086 DIP2CQ9Y2E4 1556 aa22.64■■□□□ 1.22
VEGFB-202ENST00000426086 ARHGAP5Q13017 1502 aa22.63■■□□□ 1.21
VEGFB-202ENST00000426086 TROQ12816 1431 aaPredicted RBP22.63■■□□□ 1.21
VEGFB-202ENST00000426086 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
VEGFB-202ENST00000426086 ILDR2Q71H61 639 aa22.62■■□□□ 1.21
VEGFB-202ENST00000426086 ABCA6Q8N139 1617 aa22.6■■□□□ 1.21
VEGFB-202ENST00000426086 UHRF1BP1Q6BDS2 1440 aa22.6■■□□□ 1.21
VEGFB-202ENST00000426086 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
VEGFB-202ENST00000426086 CDC42BPBQ9Y5S2 1711 aa22.59■■□□□ 1.21
VEGFB-202ENST00000426086 C3P01024 1663 aa22.58■■□□□ 1.2
VEGFB-202ENST00000426086 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
VEGFB-202ENST00000426086 REREQ9P2R6 1566 aa22.57■■□□□ 1.2
VEGFB-202ENST00000426086 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
VEGFB-202ENST00000426086 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
VEGFB-202ENST00000426086 MLH3Q9UHC1 1453 aa22.54■■□□□ 1.2
VEGFB-202ENST00000426086 SETD1BQ9UPS6 1966 aaKnown RBP22.54■■□□□ 1.2
VEGFB-202ENST00000426086 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
VEGFB-202ENST00000426086 CLIP1P30622 1438 aa22.53■■□□□ 1.2
VEGFB-202ENST00000426086 ABCC1P33527 1531 aa22.52■■□□□ 1.19
VEGFB-202ENST00000426086 AGLP35573 1532 aa22.51■■□□□ 1.19
VEGFB-202ENST00000426086 PREX2Q70Z35 1606 aa22.5■■□□□ 1.19
VEGFB-202ENST00000426086 PTPRTO14522 1441 aa22.5■■□□□ 1.19
VEGFB-202ENST00000426086 LTBP4Q8N2S1 1624 aa22.49■■□□□ 1.19
VEGFB-202ENST00000426086 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
VEGFB-202ENST00000426086 KIDINS220Q9ULH0 1771 aa22.49■■□□□ 1.19
VEGFB-202ENST00000426086 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
VEGFB-202ENST00000426086 SOCS7O14512 581 aa22.43■■□□□ 1.18
VEGFB-202ENST00000426086 CDC42BPAQ5VT25 1732 aa22.43■■□□□ 1.18
VEGFB-202ENST00000426086 ESF1Q9H501 851 aaKnown RBP22.41■■□□□ 1.18
VEGFB-202ENST00000426086 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
VEGFB-202ENST00000426086 SPATA31D1Q6ZQQ2 1576 aa22.4■■□□□ 1.18
VEGFB-202ENST00000426086 SAMD9LQ8IVG5 1584 aa22.39■■□□□ 1.18
VEGFB-202ENST00000426086 CNTLNQ9NXG0 1405 aa22.38■■□□□ 1.17
VEGFB-202ENST00000426086 CCDC18Q5T9S5 1454 aa22.37■■□□□ 1.17
VEGFB-202ENST00000426086 CAMSAP1Q5T5Y3 1602 aa22.37■■□□□ 1.17
VEGFB-202ENST00000426086 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
VEGFB-202ENST00000426086 ZNF777Q9ULD5 760 aaPredicted RBP22.35■■□□□ 1.17
VEGFB-202ENST00000426086 SYCP2Q9BX26 1530 aa22.35■■□□□ 1.17
VEGFB-202ENST00000426086 ZMYM3Q14202 1370 aa22.35■■□□□ 1.17
VEGFB-202ENST00000426086 NCKAP5LQ9HCH0 1330 aa22.33■■□□□ 1.17
VEGFB-202ENST00000426086 MROH2AA6NES4 1674 aa22.33■■□□□ 1.17
VEGFB-202ENST00000426086 NPATQ14207 1427 aa22.33■■□□□ 1.17
VEGFB-202ENST00000426086 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.17
VEGFB-202ENST00000426086 SUPT6HQ7KZ85 1726 aaKnown RBP22.33■■□□□ 1.17
VEGFB-202ENST00000426086 IQSEC2Q5JU85 1478 aa22.33■■□□□ 1.16
VEGFB-202ENST00000426086 ZNF335Q9H4Z2 1342 aaPredicted RBP22.31■■□□□ 1.16
VEGFB-202ENST00000426086 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
VEGFB-202ENST00000426086 CLTCQ00610 1675 aaKnown RBP22.29■■□□□ 1.16
VEGFB-202ENST00000426086 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
VEGFB-202ENST00000426086 ATP7AQ04656 1500 aa22.27■■□□□ 1.16
VEGFB-202ENST00000426086 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
VEGFB-202ENST00000426086 MYO3AQ8NEV4 1616 aa22.27■■□□□ 1.16
VEGFB-202ENST00000426086 FYCO1Q9BQS8 1478 aa22.27■■□□□ 1.16
VEGFB-202ENST00000426086 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
VEGFB-202ENST00000426086 PTPRKQ15262 1439 aa22.25■■□□□ 1.15
VEGFB-202ENST00000426086 ZNF142P52746 1687 aaPredicted RBP22.24■■□□□ 1.15
VEGFB-202ENST00000426086 A2MP01023 1474 aa22.23■■□□□ 1.15
VEGFB-202ENST00000426086 CEP170BQ9Y4F5 1589 aaPredicted RBP22.22■■□□□ 1.15
VEGFB-202ENST00000426086 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
VEGFB-202ENST00000426086 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
VEGFB-202ENST00000426086 GGT6Q6P531 493 aa22.21■■□□□ 1.15
VEGFB-202ENST00000426086 KIAA1107Q9UPP5 1409 aa22.21■■□□□ 1.15
VEGFB-202ENST00000426086 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
VEGFB-202ENST00000426086 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
VEGFB-202ENST00000426086 PKD2Q13563 968 aa22.18■■□□□ 1.14
VEGFB-202ENST00000426086 ZNF644Q9H582 1327 aaPredicted RBP22.17■■□□□ 1.14
VEGFB-202ENST00000426086 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
VEGFB-202ENST00000426086 PLEKHH2Q8IVE3 1493 aa22.15■■□□□ 1.14
VEGFB-202ENST00000426086 ADGBQ8N7X0 1667 aa22.12■■□□□ 1.13
VEGFB-202ENST00000426086 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
VEGFB-202ENST00000426086 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
VEGFB-202ENST00000426086 MBD5Q9P267 1494 aa22.11■■□□□ 1.13
VEGFB-202ENST00000426086 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
VEGFB-202ENST00000426086 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
VEGFB-202ENST00000426086 FBXO31Q5XUX0 539 aaPredicted RBP22.08■■□□□ 1.13
VEGFB-202ENST00000426086 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.12
VEGFB-202ENST00000426086 NEURL4Q96JN8 1562 aa22.07■■□□□ 1.12
VEGFB-202ENST00000426086 HSPA1LP34931 641 aa22.05■■□□□ 1.12
VEGFB-202ENST00000426086 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
VEGFB-202ENST00000426086 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms