RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P32-201ENST00000425971 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P32-201ENST00000425971 ATMINO43313 823 aaPredicted RBP13.45□□□□□ -0.26
HMGB1P32-201ENST00000425971 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
HMGB1P32-201ENST00000425971 MICALL2Q8IY33 904 aa13.44□□□□□ -0.26
HMGB1P32-201ENST00000425971 IRX5P78411 483 aaPredicted RBP13.42□□□□□ -0.26
HMGB1P32-201ENST00000425971 IER5LQ5T953 404 aa13.42□□□□□ -0.26
HMGB1P32-201ENST00000425971 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
HMGB1P32-201ENST00000425971 ZC3H15Q8WU90 426 aaKnown RBP13.38□□□□□ -0.27
HMGB1P32-201ENST00000425971 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
HMGB1P32-201ENST00000425971 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
HMGB1P32-201ENST00000425971 DSG2Q14126 1118 aa13.35□□□□□ -0.27
HMGB1P32-201ENST00000425971 SMYD5Q6GMV2 418 aa13.35□□□□□ -0.27
HMGB1P32-201ENST00000425971 EMILIN3Q9NT22 766 aa13.34□□□□□ -0.27
HMGB1P32-201ENST00000425971 FOXK1P85037 733 aa13.33□□□□□ -0.28
HMGB1P32-201ENST00000425971 BOLA1Q9Y3E2 137 aa13.33□□□□□ -0.28
HMGB1P32-201ENST00000425971 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
HMGB1P32-201ENST00000425971 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
HMGB1P32-201ENST00000425971 KIF3CO14782 793 aa13.31□□□□□ -0.28
HMGB1P32-201ENST00000425971 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
HMGB1P32-201ENST00000425971 DPYSL4O14531 572 aa13.28□□□□□ -0.28
HMGB1P32-201ENST00000425971 C7P10643 843 aa13.28□□□□□ -0.28
HMGB1P32-201ENST00000425971 PLCG2P16885 1265 aa13.28□□□□□ -0.28
HMGB1P32-201ENST00000425971 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
HMGB1P32-201ENST00000425971 MLLT3P42568 568 aaPredicted RBP13.27□□□□□ -0.29
HMGB1P32-201ENST00000425971 PDIA6Q15084 440 aa13.27□□□□□ -0.29
HMGB1P32-201ENST00000425971 SPDYE16A6NNV3 312 aaPredicted RBP13.25□□□□□ -0.29
HMGB1P32-201ENST00000425971 ZMYND10O75800 440 aa13.25□□□□□ -0.29
HMGB1P32-201ENST00000425971 PLPP6Q8IY26 295 aa13.25□□□□□ -0.29
HMGB1P32-201ENST00000425971 G3V3G9 751 aa13.24□□□□□ -0.29
HMGB1P32-201ENST00000425971 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
HMGB1P32-201ENST00000425971 TMEM132AQ24JP5 1023 aa13.21□□□□□ -0.29
HMGB1P32-201ENST00000425971 LHX8Q68G74 356 aa13.21□□□□□ -0.29
HMGB1P32-201ENST00000425971 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.29
HMGB1P32-201ENST00000425971 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P32-201ENST00000425971 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
HMGB1P32-201ENST00000425971 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P32-201ENST00000425971 SEC24BO95487 1268 aa13.19□□□□□ -0.3
HMGB1P32-201ENST00000425971 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
HMGB1P32-201ENST00000425971 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
HMGB1P32-201ENST00000425971 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
HMGB1P32-201ENST00000425971 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
HMGB1P32-201ENST00000425971 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
HMGB1P32-201ENST00000425971 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
HMGB1P32-201ENST00000425971 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
HMGB1P32-201ENST00000425971 GPR37O15354 613 aa13.08□□□□□ -0.32
HMGB1P32-201ENST00000425971 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
HMGB1P32-201ENST00000425971 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
HMGB1P32-201ENST00000425971 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMGB1P32-201ENST00000425971 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
HMGB1P32-201ENST00000425971 PTGER2P43116 358 aa13.03□□□□□ -0.32
HMGB1P32-201ENST00000425971 AK7Q96M32 723 aa13.03□□□□□ -0.32
HMGB1P32-201ENST00000425971 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
HMGB1P32-201ENST00000425971 OSBPP22059 807 aa13□□□□□ -0.33
HMGB1P32-201ENST00000425971 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
HMGB1P32-201ENST00000425971 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
HMGB1P32-201ENST00000425971 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
HMGB1P32-201ENST00000425971 TBC1D12O60347 775 aa12.97□□□□□ -0.33
HMGB1P32-201ENST00000425971 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
HMGB1P32-201ENST00000425971 KRI1Q8N9T8 703 aaKnown RBP12.97□□□□□ -0.33
HMGB1P32-201ENST00000425971 EVI5O60447 810 aa12.96□□□□□ -0.33
HMGB1P32-201ENST00000425971 SLC34A2O95436 690 aa12.96□□□□□ -0.33
HMGB1P32-201ENST00000425971 SCUBE2Q9NQ36 999 aa12.96□□□□□ -0.33
HMGB1P32-201ENST00000425971 TIMELESSQ9UNS1 1208 aa12.96□□□□□ -0.33
HMGB1P32-201ENST00000425971 DDX12PQ92771 950 aa12.94□□□□□ -0.34
HMGB1P32-201ENST00000425971 TRIM66O15016 1216 aa12.93□□□□□ -0.34
HMGB1P32-201ENST00000425971 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
HMGB1P32-201ENST00000425971 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
HMGB1P32-201ENST00000425971 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
HMGB1P32-201ENST00000425971 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P32-201ENST00000425971 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P32-201ENST00000425971 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
HMGB1P32-201ENST00000425971 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
HMGB1P32-201ENST00000425971 GNPATO15228 680 aa12.88□□□□□ -0.35
HMGB1P32-201ENST00000425971 PDE4DQ08499 809 aa12.88□□□□□ -0.35
HMGB1P32-201ENST00000425971 HIC1Q14526 733 aa12.88□□□□□ -0.35
HMGB1P32-201ENST00000425971 FCHSD2O94868 740 aa12.87□□□□□ -0.35
HMGB1P32-201ENST00000425971 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
HMGB1P32-201ENST00000425971 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
HMGB1P32-201ENST00000425971 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
HMGB1P32-201ENST00000425971 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
HMGB1P32-201ENST00000425971 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
HMGB1P32-201ENST00000425971 IRF6O14896 467 aa12.83□□□□□ -0.36
HMGB1P32-201ENST00000425971 PHF14O94880 888 aa12.82□□□□□ -0.36
HMGB1P32-201ENST00000425971 PTGDRQ13258 359 aa12.82□□□□□ -0.36
HMGB1P32-201ENST00000425971 FECHP22830 423 aa12.81□□□□□ -0.36
HMGB1P32-201ENST00000425971 EPAS1Q99814 870 aa12.81□□□□□ -0.36
HMGB1P32-201ENST00000425971 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
HMGB1P32-201ENST00000425971 AMHR2Q16671 573 aa12.8□□□□□ -0.36
HMGB1P32-201ENST00000425971 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
HMGB1P32-201ENST00000425971 PCDHGA4Q9Y5G9 962 aa12.8□□□□□ -0.36
HMGB1P32-201ENST00000425971 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
HMGB1P32-201ENST00000425971 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
HMGB1P32-201ENST00000425971 ABCC9O60706 1549 aa12.78□□□□□ -0.36
HMGB1P32-201ENST00000425971 CDHR5Q9HBB8 845 aa12.77□□□□□ -0.37
HMGB1P32-201ENST00000425971 PCDHGA10Q9Y5H3 936 aa12.76□□□□□ -0.37
HMGB1P32-201ENST00000425971 NPDC1Q9NQX5 325 aaPredicted RBP12.75□□□□□ -0.37
HMGB1P32-201ENST00000425971 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
HMGB1P32-201ENST00000425971 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
HMGB1P32-201ENST00000425971 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms