RNA–Protein interactions for RNA: ENST00000424953.1

LINC02238-201, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 5 BASIC

Gene LINC02238, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-201ENST00000424953 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
LINC02238-201ENST00000424953 MICALL2Q8IY33 904 aa11.64□□□□□ -0.55
LINC02238-201ENST00000424953 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
LINC02238-201ENST00000424953 TMEM121BQ9BXQ6 578 aaPredicted RBP11.63□□□□□ -0.55
LINC02238-201ENST00000424953 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
LINC02238-201ENST00000424953 SNPHO15079 494 aa11.57□□□□□ -0.56
LINC02238-201ENST00000424953 ST18O60284 1047 aa11.54□□□□□ -0.56
LINC02238-201ENST00000424953 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
LINC02238-201ENST00000424953 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
LINC02238-201ENST00000424953 HAP1P54257 671 aaPredicted RBP11.5□□□□□ -0.57
LINC02238-201ENST00000424953 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
LINC02238-201ENST00000424953 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
LINC02238-201ENST00000424953 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
LINC02238-201ENST00000424953 C2orf72A6NCS6 295 aa11.44□□□□□ -0.58
LINC02238-201ENST00000424953 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
LINC02238-201ENST00000424953 CRISPLD2Q9H0B8 497 aa11.43□□□□□ -0.58
LINC02238-201ENST00000424953 KIF3CO14782 793 aa11.42□□□□□ -0.58
LINC02238-201ENST00000424953 PDE4AP27815 886 aa11.42□□□□□ -0.58
LINC02238-201ENST00000424953 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
LINC02238-201ENST00000424953 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
LINC02238-201ENST00000424953 DSG2Q14126 1118 aa11.36□□□□□ -0.59
LINC02238-201ENST00000424953 FOXK1P85037 733 aa11.35□□□□□ -0.59
LINC02238-201ENST00000424953 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
LINC02238-201ENST00000424953 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
LINC02238-201ENST00000424953 MFSD10Q14728 455 aa11.34□□□□□ -0.59
LINC02238-201ENST00000424953 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
LINC02238-201ENST00000424953 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
LINC02238-201ENST00000424953 EMP3P54852 163 aa11.31□□□□□ -0.6
LINC02238-201ENST00000424953 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
LINC02238-201ENST00000424953 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
LINC02238-201ENST00000424953 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
LINC02238-201ENST00000424953 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
LINC02238-201ENST00000424953 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
LINC02238-201ENST00000424953 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
LINC02238-201ENST00000424953 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
LINC02238-201ENST00000424953 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
LINC02238-201ENST00000424953 SLC34A2O95436 690 aa11.21□□□□□ -0.61
LINC02238-201ENST00000424953 CAMK2BQ13554 666 aa11.21□□□□□ -0.61
LINC02238-201ENST00000424953 E2F4Q16254 413 aa11.21□□□□□ -0.61
LINC02238-201ENST00000424953 HS3ST6Q96QI5 342 aa11.21□□□□□ -0.61
LINC02238-201ENST00000424953 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
LINC02238-201ENST00000424953 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
LINC02238-201ENST00000424953 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
LINC02238-201ENST00000424953 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC02238-201ENST00000424953 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
LINC02238-201ENST00000424953 OXER1Q8TDS5 423 aa11.17□□□□□ -0.62
LINC02238-201ENST00000424953 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
LINC02238-201ENST00000424953 PCDHGA4Q9Y5G9 962 aa11.16□□□□□ -0.62
LINC02238-201ENST00000424953 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
LINC02238-201ENST00000424953 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
LINC02238-201ENST00000424953 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
LINC02238-201ENST00000424953 ARSIQ5FYB1 569 aa11.14□□□□□ -0.63
LINC02238-201ENST00000424953 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
LINC02238-201ENST00000424953 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
LINC02238-201ENST00000424953 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
LINC02238-201ENST00000424953 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC02238-201ENST00000424953 ERBB3P21860 1342 aa11.12□□□□□ -0.63
LINC02238-201ENST00000424953 TBC1D12O60347 775 aa11.12□□□□□ -0.63
LINC02238-201ENST00000424953 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
LINC02238-201ENST00000424953 DPYSL4O14531 572 aa11.11□□□□□ -0.63
LINC02238-201ENST00000424953 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
LINC02238-201ENST00000424953 NUDT7P0C024 238 aa11.09□□□□□ -0.63
LINC02238-201ENST00000424953 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
LINC02238-201ENST00000424953 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
LINC02238-201ENST00000424953 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
LINC02238-201ENST00000424953 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
LINC02238-201ENST00000424953 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
LINC02238-201ENST00000424953 EVI5O60447 810 aa11.05□□□□□ -0.64
LINC02238-201ENST00000424953 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
LINC02238-201ENST00000424953 PDIA6Q15084 440 aa11.02□□□□□ -0.65
LINC02238-201ENST00000424953 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
LINC02238-201ENST00000424953 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
LINC02238-201ENST00000424953 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
LINC02238-201ENST00000424953 LHX6Q9UPM6 363 aa11□□□□□ -0.65
LINC02238-201ENST00000424953 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
LINC02238-201ENST00000424953 SEMA3EO15041 775 aa10.93□□□□□ -0.66
LINC02238-201ENST00000424953 PTGER2P43116 358 aa10.92□□□□□ -0.66
LINC02238-201ENST00000424953 DDX12PQ92771 950 aa10.92□□□□□ -0.66
LINC02238-201ENST00000424953 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
LINC02238-201ENST00000424953 PSDA5PKW4 1024 aaPredicted RBP10.9□□□□□ -0.66
LINC02238-201ENST00000424953 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.66
LINC02238-201ENST00000424953 FOSBP53539 338 aa10.9□□□□□ -0.66
LINC02238-201ENST00000424953 JPH4Q96JJ6 628 aa10.9□□□□□ -0.66
LINC02238-201ENST00000424953 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
LINC02238-201ENST00000424953 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
LINC02238-201ENST00000424953 PHF14O94880 888 aa10.88□□□□□ -0.67
LINC02238-201ENST00000424953 NBR1Q14596 966 aa10.87□□□□□ -0.67
LINC02238-201ENST00000424953 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
LINC02238-201ENST00000424953 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
LINC02238-201ENST00000424953 TYW1BQ6NUM6 668 aa10.84□□□□□ -0.67
LINC02238-201ENST00000424953 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
LINC02238-201ENST00000424953 EPAS1Q99814 870 aa10.84□□□□□ -0.67
LINC02238-201ENST00000424953 OSBPP22059 807 aa10.83□□□□□ -0.68
LINC02238-201ENST00000424953 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
LINC02238-201ENST00000424953 ADAM33Q9BZ11 813 aa10.83□□□□□ -0.68
LINC02238-201ENST00000424953 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
LINC02238-201ENST00000424953 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
LINC02238-201ENST00000424953 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
LINC02238-201ENST00000424953 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
LINC02238-201ENST00000424953 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms