RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
SHANK2-206ENST00000424924 DDRGK1Q96HY6 314 aa13.49□□□□□ -0.25
SHANK2-206ENST00000424924 FOXD1Q16676 465 aa13.48□□□□□ -0.25
SHANK2-206ENST00000424924 GOLGA6L4A6NEF3 574 aa13.48□□□□□ -0.25
SHANK2-206ENST00000424924 VPS53Q5VIR6 699 aa13.48□□□□□ -0.25
SHANK2-206ENST00000424924 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
SHANK2-206ENST00000424924 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
SHANK2-206ENST00000424924 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
SHANK2-206ENST00000424924 GTF2E1P29083 439 aaPredicted RBP13.46□□□□□ -0.25
SHANK2-206ENST00000424924 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
SHANK2-206ENST00000424924 B4GALNT3Q6L9W6 998 aa13.45□□□□□ -0.26
SHANK2-206ENST00000424924 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-206ENST00000424924 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
SHANK2-206ENST00000424924 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
SHANK2-206ENST00000424924 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
SHANK2-206ENST00000424924 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
SHANK2-206ENST00000424924 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
SHANK2-206ENST00000424924 RAD21O60216 631 aa13.43□□□□□ -0.26
SHANK2-206ENST00000424924 TMF1P82094 1093 aa13.43□□□□□ -0.26
SHANK2-206ENST00000424924 CREBRFQ8IUR6 639 aa13.43□□□□□ -0.26
SHANK2-206ENST00000424924 HDGFL2Q7Z4V5 671 aaPredicted RBP13.43□□□□□ -0.26
SHANK2-206ENST00000424924 EVA1CP58658 441 aa13.42□□□□□ -0.26
SHANK2-206ENST00000424924 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
SHANK2-206ENST00000424924 GOLGA6L6A8MZA4 724 aa13.42□□□□□ -0.26
SHANK2-206ENST00000424924 NGDNQ8NEJ9 315 aaKnown RBP13.42□□□□□ -0.26
SHANK2-206ENST00000424924 FBXW7Q969H0 707 aa13.41□□□□□ -0.26
SHANK2-206ENST00000424924 HSP90B1P14625 803 aaKnown RBP13.4□□□□□ -0.26
SHANK2-206ENST00000424924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHANK2-206ENST00000424924 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
SHANK2-206ENST00000424924 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
SHANK2-206ENST00000424924 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.27
SHANK2-206ENST00000424924 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-206ENST00000424924 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
SHANK2-206ENST00000424924 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
SHANK2-206ENST00000424924 NAP1L5Q96NT1 182 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-206ENST00000424924 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
SHANK2-206ENST00000424924 CECR2Q9BXF3 1484 aa13.37□□□□□ -0.27
SHANK2-206ENST00000424924 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
SHANK2-206ENST00000424924 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-206ENST00000424924 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
SHANK2-206ENST00000424924 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-206ENST00000424924 KIAA1211Q6ZU35 1233 aa13.36□□□□□ -0.27
SHANK2-206ENST00000424924 MCCP23508 829 aa13.36□□□□□ -0.27
SHANK2-206ENST00000424924 NOC3LQ8WTT2 800 aaKnown RBP13.35□□□□□ -0.27
SHANK2-206ENST00000424924 AMPHP49418 695 aa13.35□□□□□ -0.27
SHANK2-206ENST00000424924 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
SHANK2-206ENST00000424924 CYB5RLQ6IPT4 315 aa13.34□□□□□ -0.27
SHANK2-206ENST00000424924 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
SHANK2-206ENST00000424924 ARID3AQ99856 593 aa13.33□□□□□ -0.28
SHANK2-206ENST00000424924 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
SHANK2-206ENST00000424924 HSCBQ8IWL3 235 aa13.33□□□□□ -0.28
SHANK2-206ENST00000424924 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
SHANK2-206ENST00000424924 KIF3BO15066 747 aa13.32□□□□□ -0.28
SHANK2-206ENST00000424924 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
SHANK2-206ENST00000424924 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-206ENST00000424924 MARCH6O60337 910 aa13.31□□□□□ -0.28
SHANK2-206ENST00000424924 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
SHANK2-206ENST00000424924 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
SHANK2-206ENST00000424924 NACADO15069 1562 aa13.3□□□□□ -0.28
SHANK2-206ENST00000424924 PKD2Q13563 968 aa13.3□□□□□ -0.28
SHANK2-206ENST00000424924 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
SHANK2-206ENST00000424924 SOGA1O94964 1423 aa13.29□□□□□ -0.28
SHANK2-206ENST00000424924 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.28
SHANK2-206ENST00000424924 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
SHANK2-206ENST00000424924 MS4A1P11836 297 aa13.28□□□□□ -0.28
SHANK2-206ENST00000424924 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
SHANK2-206ENST00000424924 NRDCO43847 1150 aa13.28□□□□□ -0.28
SHANK2-206ENST00000424924 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
SHANK2-206ENST00000424924 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
SHANK2-206ENST00000424924 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
SHANK2-206ENST00000424924 WASHC2CQ9Y4E1 1318 aa13.27□□□□□ -0.28
SHANK2-206ENST00000424924 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
SHANK2-206ENST00000424924 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
SHANK2-206ENST00000424924 FOXD4L5Q5VV16 416 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-206ENST00000424924 FOXD4L4Q8WXT5 416 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-206ENST00000424924 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
SHANK2-206ENST00000424924 EEA1Q15075 1411 aa13.25□□□□□ -0.29
SHANK2-206ENST00000424924 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
SHANK2-206ENST00000424924 TRIM34Q9BYJ4 488 aa13.25□□□□□ -0.29
SHANK2-206ENST00000424924 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-206ENST00000424924 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
SHANK2-206ENST00000424924 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
SHANK2-206ENST00000424924 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-206ENST00000424924 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
SHANK2-206ENST00000424924 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
SHANK2-206ENST00000424924 CUX2O14529 1486 aa13.23□□□□□ -0.29
SHANK2-206ENST00000424924 PES1O00541 588 aaKnown RBP13.23□□□□□ -0.29
SHANK2-206ENST00000424924 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
SHANK2-206ENST00000424924 CHAF1AQ13111 956 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-206ENST00000424924 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-206ENST00000424924 GPATCH3Q96I76 525 aa13.22□□□□□ -0.29
SHANK2-206ENST00000424924 TCEAL9Q9UHQ7 104 aa13.22□□□□□ -0.29
SHANK2-206ENST00000424924 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-206ENST00000424924 RRP7AQ9Y3A4 280 aaKnown RBP13.21□□□□□ -0.3
SHANK2-206ENST00000424924 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
SHANK2-206ENST00000424924 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
SHANK2-206ENST00000424924 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-206ENST00000424924 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
SHANK2-206ENST00000424924 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
SHANK2-206ENST00000424924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms