RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 KIF14Q15058 1648 aa24.03■■□□□ 1.44
CMTM3-202ENST00000424011 GPATCH8Q9UKJ3 1502 aaKnown RBP24.03■■□□□ 1.44
CMTM3-202ENST00000424011 DAPK1P53355 1430 aa24.01■■□□□ 1.43
CMTM3-202ENST00000424011 ROCK1Q13464 1354 aa24.01■■□□□ 1.43
CMTM3-202ENST00000424011 DNMT1P26358 1616 aaKnown RBP24■■□□□ 1.43
CMTM3-202ENST00000424011 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
CMTM3-202ENST00000424011 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
CMTM3-202ENST00000424011 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
CMTM3-202ENST00000424011 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
CMTM3-202ENST00000424011 ABCC5O15440 1437 aa23.97■■□□□ 1.43
CMTM3-202ENST00000424011 CAMSAP2Q08AD1 1489 aa23.97■■□□□ 1.43
CMTM3-202ENST00000424011 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
CMTM3-202ENST00000424011 ZCCHC11Q5TAX3 1644 aaKnown RBP23.96■■□□□ 1.43
CMTM3-202ENST00000424011 ZNF644Q9H582 1327 aaPredicted RBP23.95■■□□□ 1.42
CMTM3-202ENST00000424011 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
CMTM3-202ENST00000424011 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-202ENST00000424011 CDC42BPAQ5VT25 1732 aa23.87■■□□□ 1.41
CMTM3-202ENST00000424011 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
CMTM3-202ENST00000424011 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
CMTM3-202ENST00000424011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.84■■□□□ 1.413e-7■■■■■ 59
CMTM3-202ENST00000424011 TRIM52Q96A61 297 aa23.83■■□□□ 1.4
CMTM3-202ENST00000424011 ADGRL2O95490 1459 aa23.82■■□□□ 1.4
CMTM3-202ENST00000424011 NPM1P06748 294 aaKnown RBP eCLIP23.82■■□□□ 1.4
CMTM3-202ENST00000424011 NCOA1Q15788 1441 aa23.8■■□□□ 1.4
CMTM3-202ENST00000424011 WDR7Q9Y4E6 1490 aa23.8■■□□□ 1.4
CMTM3-202ENST00000424011 SHANK2Q9UPX8 1470 aa23.8■■□□□ 1.4
CMTM3-202ENST00000424011 MIER1Q8N108 512 aa23.79■■□□□ 1.4
CMTM3-202ENST00000424011 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
CMTM3-202ENST00000424011 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
CMTM3-202ENST00000424011 ANKRD30AQ9BXX3 1397 aa23.79■■□□□ 1.4
CMTM3-202ENST00000424011 TTC37Q6PGP7 1564 aa23.79■■□□□ 1.4
CMTM3-202ENST00000424011 KDM6BO15054 1643 aa23.79■■□□□ 1.4
CMTM3-202ENST00000424011 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
CMTM3-202ENST00000424011 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
CMTM3-202ENST00000424011 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
CMTM3-202ENST00000424011 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
CMTM3-202ENST00000424011 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
CMTM3-202ENST00000424011 PREX2Q70Z35 1606 aa23.76■■□□□ 1.39
CMTM3-202ENST00000424011 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
CMTM3-202ENST00000424011 TONSLQ96HA7 1378 aa23.75■■□□□ 1.39
CMTM3-202ENST00000424011 MPHOSPH9Q99550 1183 aa23.75■■□□□ 1.39
CMTM3-202ENST00000424011 TSPY4P0CV99 314 aa23.75■■□□□ 1.39
CMTM3-202ENST00000424011 TSPY10P0CW01 314 aa23.75■■□□□ 1.39
CMTM3-202ENST00000424011 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
CMTM3-202ENST00000424011 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
CMTM3-202ENST00000424011 PLCH2O75038 1416 aa23.72■■□□□ 1.39
CMTM3-202ENST00000424011 C9orf84Q5VXU9 1444 aa23.72■■□□□ 1.39
CMTM3-202ENST00000424011 PPP1R15AO75807 674 aaPredicted RBP23.71■■□□□ 1.39
CMTM3-202ENST00000424011 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
CMTM3-202ENST00000424011 MYO5CQ9NQX4 1742 aa23.69■■□□□ 1.38
CMTM3-202ENST00000424011 DENND4BO75064 1496 aaPredicted RBP23.69■■□□□ 1.38
CMTM3-202ENST00000424011 MBD5Q9P267 1494 aa23.69■■□□□ 1.38
CMTM3-202ENST00000424011 SAMD9LQ8IVG5 1584 aa23.68■■□□□ 1.38
CMTM3-202ENST00000424011 CCDC141Q6ZP82 1450 aa23.67■■□□□ 1.38
CMTM3-202ENST00000424011 PLEKHH2Q8IVE3 1493 aa23.67■■□□□ 1.38
CMTM3-202ENST00000424011 HNRNPMP52272 730 aaKnown RBP eCLIP23.66■■□□□ 1.38
CMTM3-202ENST00000424011 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
CMTM3-202ENST00000424011 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
CMTM3-202ENST00000424011 KIAA1107Q9UPP5 1409 aa23.64■■□□□ 1.37
CMTM3-202ENST00000424011 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
CMTM3-202ENST00000424011 SLC4A1APQ9BWU0 796 aaKnown RBP23.63■■□□□ 1.37
CMTM3-202ENST00000424011 ARAP3Q8WWN8 1544 aa23.62■■□□□ 1.37
CMTM3-202ENST00000424011 KIF15Q9NS87 1388 aa23.58■■□□□ 1.37
CMTM3-202ENST00000424011 ANKRD30BQ9BXX2 1392 aa23.58■■□□□ 1.37
CMTM3-202ENST00000424011 SYCP2Q9BX26 1530 aa23.58■■□□□ 1.36
CMTM3-202ENST00000424011 PZPP20742 1482 aa23.57■■□□□ 1.36
CMTM3-202ENST00000424011 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
CMTM3-202ENST00000424011 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
CMTM3-202ENST00000424011 ARHGEF12Q9NZN5 1544 aa23.53■■□□□ 1.36
CMTM3-202ENST00000424011 FANCAO15360 1455 aa23.52■■□□□ 1.36
CMTM3-202ENST00000424011 RPRD2Q5VT52 1461 aaKnown RBP23.52■■□□□ 1.36
CMTM3-202ENST00000424011 FOXD1Q16676 465 aa23.51■■□□□ 1.35
CMTM3-202ENST00000424011 ABCC1P33527 1531 aa23.51■■□□□ 1.35
CMTM3-202ENST00000424011 KDM5DQ9BY66 1539 aa23.5■■□□□ 1.35
CMTM3-202ENST00000424011 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
CMTM3-202ENST00000424011 NUP155O75694 1391 aa23.49■■□□□ 1.35
CMTM3-202ENST00000424011 PLXNC1O60486 1568 aa23.46■■□□□ 1.35
CMTM3-202ENST00000424011 TRAPPC8Q9Y2L5 1435 aa23.45■■□□□ 1.35
CMTM3-202ENST00000424011 PKD2Q13563 968 aa23.45■■□□□ 1.34
CMTM3-202ENST00000424011 L3MBTL2Q969R5 705 aa23.43■■□□□ 1.34
CMTM3-202ENST00000424011 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
CMTM3-202ENST00000424011 AFAP1Q8N556 730 aa23.41■■□□□ 1.34
CMTM3-202ENST00000424011 SCAPERQ9BY12 1400 aa23.4■■□□□ 1.34
CMTM3-202ENST00000424011 DUOX2Q9NRD8 1548 aa23.4■■□□□ 1.34
CMTM3-202ENST00000424011 GLI2P10070 1586 aa23.39■■□□□ 1.34
CMTM3-202ENST00000424011 TEX14Q8IWB6 1497 aa23.38■■□□□ 1.33
CMTM3-202ENST00000424011 ERBINQ96RT1 1412 aa23.38■■□□□ 1.33
CMTM3-202ENST00000424011 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-202ENST00000424011 RTEL1-TNFRSF6BF6WH68 1400 aa23.37■■□□□ 1.33
CMTM3-202ENST00000424011 SPAG9O60271 1321 aaKnown RBP23.36■■□□□ 1.33
CMTM3-202ENST00000424011 FAM69CQ0P6D2 419 aa23.36■■□□□ 1.33
CMTM3-202ENST00000424011 UNC13BO14795 1591 aa23.34■■□□□ 1.33
CMTM3-202ENST00000424011 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
CMTM3-202ENST00000424011 FAM135AQ9P2D6 1515 aa23.34■■□□□ 1.33
CMTM3-202ENST00000424011 MAP3K4Q9Y6R4 1608 aa23.34■■□□□ 1.33
CMTM3-202ENST00000424011 NEO1Q92859 1461 aa23.33■■□□□ 1.32
CMTM3-202ENST00000424011 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
CMTM3-202ENST00000424011 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
CMTM3-202ENST00000424011 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
CMTM3-202ENST00000424011 ZFYVE16Q7Z3T8 1539 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms