RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 ABCC10Q5T3U5 1492 aa33.61■■■□□ 2.97
LSM8-203ENST00000422760 ZNF644Q9H582 1327 aaPredicted RBP33.59■■■□□ 2.97
LSM8-203ENST00000422760 CHIC2Q9UKJ5 165 aa33.58■■■□□ 2.97
LSM8-203ENST00000422760 ABCC5O15440 1437 aa33.55■■■□□ 2.96
LSM8-203ENST00000422760 CFDP1Q9UEE9 299 aaPredicted RBP33.55■■■□□ 2.96
LSM8-203ENST00000422760 RRP7BPQ9NSQ0 103 aa33.53■■■□□ 2.96
LSM8-203ENST00000422760 ROCK1Q13464 1354 aa33.49■■■□□ 2.95
LSM8-203ENST00000422760 KDM6BO15054 1643 aa33.49■■■□□ 2.95
LSM8-203ENST00000422760 CROCC2H7BZ55 1655 aa33.49■■■□□ 2.95
LSM8-203ENST00000422760 PELP1Q8IZL8 1130 aaKnown RBP33.47■■■□□ 2.95
LSM8-203ENST00000422760 UHRF1BP1LA0JNW5 1464 aa33.45■■■□□ 2.95
LSM8-203ENST00000422760 ADGBQ8N7X0 1667 aa33.44■■■□□ 2.94
LSM8-203ENST00000422760 NEUROD1Q13562 356 aa33.43■■■□□ 2.94
LSM8-203ENST00000422760 ZCCHC11Q5TAX3 1644 aaKnown RBP33.43■■■□□ 2.94
LSM8-203ENST00000422760 ZNF777Q9ULD5 760 aaPredicted RBP33.42■■■□□ 2.94
LSM8-203ENST00000422760 PREX2Q70Z35 1606 aa33.42■■■□□ 2.94
LSM8-203ENST00000422760 CDC42BPBQ9Y5S2 1711 aa33.38■■■□□ 2.93
LSM8-203ENST00000422760 TTC37Q6PGP7 1564 aa33.38■■■□□ 2.93
LSM8-203ENST00000422760 KDM5BQ9UGL1 1544 aa33.36■■■□□ 2.93
LSM8-203ENST00000422760 SIN3AQ96ST3 1273 aa33.36■■■□□ 2.93
LSM8-203ENST00000422760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.34■■■□□ 2.93
LSM8-203ENST00000422760 ADGRL2O95490 1459 aa33.33■■■□□ 2.93
LSM8-203ENST00000422760 SAMD9LQ8IVG5 1584 aa33.3■■■□□ 2.92
LSM8-203ENST00000422760 SHANK2Q9UPX8 1470 aa33.29■■■□□ 2.92
LSM8-203ENST00000422760 NCOA1Q15788 1441 aa33.28■■■□□ 2.92
LSM8-203ENST00000422760 MYO5CQ9NQX4 1742 aa33.28■■■□□ 2.92
LSM8-203ENST00000422760 ARHGEF5Q12774 1597 aa33.26■■■□□ 2.92
LSM8-203ENST00000422760 DENND4BO75064 1496 aaPredicted RBP33.26■■■□□ 2.92
LSM8-203ENST00000422760 TRIM52Q96A61 297 aa33.24■■■□□ 2.91
LSM8-203ENST00000422760 OSCARQ8IYS5 282 aa33.22■■■□□ 2.91
LSM8-203ENST00000422760 TIMELESSQ9UNS1 1208 aa33.22■■■□□ 2.91
LSM8-203ENST00000422760 ARHGAP5Q13017 1502 aa33.21■■■□□ 2.91
LSM8-203ENST00000422760 C9orf84Q5VXU9 1444 aa33.2■■■□□ 2.91
LSM8-203ENST00000422760 ANKRD30AQ9BXX3 1397 aa33.2■■■□□ 2.91
LSM8-203ENST00000422760 MBD5Q9P267 1494 aa33.2■■■□□ 2.91
LSM8-203ENST00000422760 MIER1Q8N108 512 aa33.2■■■□□ 2.9
LSM8-203ENST00000422760 CCDC141Q6ZP82 1450 aa33.15■■■□□ 2.9
LSM8-203ENST00000422760 SYCP2Q9BX26 1530 aa33.14■■■□□ 2.9
LSM8-203ENST00000422760 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
LSM8-203ENST00000422760 MPHOSPH9Q99550 1183 aa33.12■■■□□ 2.89
LSM8-203ENST00000422760 HNRNPMP52272 730 aaKnown RBP eCLIP33.12■■■□□ 2.892e-7■□□□□ 11
LSM8-203ENST00000422760 TONSLQ96HA7 1378 aa33.1■■■□□ 2.89
LSM8-203ENST00000422760 GTF3C3Q9Y5Q9 886 aa33.1■■■□□ 2.89
LSM8-203ENST00000422760 ANKRD50Q9ULJ7 1429 aa33.07■■■□□ 2.89
LSM8-203ENST00000422760 TSPY4P0CV99 314 aa33.07■■■□□ 2.88
LSM8-203ENST00000422760 TSPY10P0CW01 314 aa33.07■■■□□ 2.88
LSM8-203ENST00000422760 WDR7Q9Y4E6 1490 aa33.06■■■□□ 2.88
LSM8-203ENST00000422760 PLCH2O75038 1416 aa33.06■■■□□ 2.88
LSM8-203ENST00000422760 PLEKHH2Q8IVE3 1493 aa33.05■■■□□ 2.88
LSM8-203ENST00000422760 PZPP20742 1482 aa33.03■■■□□ 2.88
LSM8-203ENST00000422760 MAST1Q9Y2H9 1570 aa33.02■■■□□ 2.88
LSM8-203ENST00000422760 KIAA1107Q9UPP5 1409 aa33.02■■■□□ 2.88
LSM8-203ENST00000422760 RSPH4AQ5TD94 716 aa33.02■■■□□ 2.88
LSM8-203ENST00000422760 PPP1R15AO75807 674 aaPredicted RBP33.01■■■□□ 2.88
LSM8-203ENST00000422760 KIF15Q9NS87 1388 aa33.01■■■□□ 2.87
LSM8-203ENST00000422760 ARAP3Q8WWN8 1544 aa32.97■■■□□ 2.87
LSM8-203ENST00000422760 SLC4A1APQ9BWU0 796 aaKnown RBP32.96■■■□□ 2.87
LSM8-203ENST00000422760 ABCC1P33527 1531 aa32.96■■■□□ 2.87
LSM8-203ENST00000422760 FOXD1Q16676 465 aa32.96■■■□□ 2.87
LSM8-203ENST00000422760 ARHGEF12Q9NZN5 1544 aa32.95■■■□□ 2.87
LSM8-203ENST00000422760 ANKRD30BQ9BXX2 1392 aa32.94■■■□□ 2.86
LSM8-203ENST00000422760 ABCA9Q8IUA7 1624 aa32.93■■■□□ 2.86
LSM8-203ENST00000422760 PLXNC1O60486 1568 aa32.92■■■□□ 2.86
LSM8-203ENST00000422760 ASXL2Q76L83 1435 aa32.91■■■□□ 2.86
LSM8-203ENST00000422760 EFCAB2Q5VUJ9 269 aa32.9■■■□□ 2.86
LSM8-203ENST00000422760 KDM5DQ9BY66 1539 aa32.9■■■□□ 2.86
LSM8-203ENST00000422760 RPRD2Q5VT52 1461 aaKnown RBP32.86■■■□□ 2.85
LSM8-203ENST00000422760 YTHDC1Q96MU7 727 aaKnown RBP32.84■■■□□ 2.85
LSM8-203ENST00000422760 NUP155O75694 1391 aa32.82■■■□□ 2.84
LSM8-203ENST00000422760 TRAPPC8Q9Y2L5 1435 aa32.79■■■□□ 2.84
LSM8-203ENST00000422760 FANCAO15360 1455 aa32.78■■■□□ 2.84
LSM8-203ENST00000422760 UNC13BO14795 1591 aa32.77■■■□□ 2.84
LSM8-203ENST00000422760 TEX14Q8IWB6 1497 aa32.77■■■□□ 2.84
LSM8-203ENST00000422760 NPM1P06748 294 aaKnown RBP eCLIP32.75■■■□□ 2.83
LSM8-203ENST00000422760 PKD2Q13563 968 aa32.75■■■□□ 2.83
LSM8-203ENST00000422760 DUOX2Q9NRD8 1548 aa32.74■■■□□ 2.83
LSM8-203ENST00000422760 FAM135AQ9P2D6 1515 aa32.71■■■□□ 2.83
LSM8-203ENST00000422760 L3MBTL2Q969R5 705 aa32.7■■■□□ 2.83
LSM8-203ENST00000422760 ZFYVE16Q7Z3T8 1539 aa32.7■■■□□ 2.83
LSM8-203ENST00000422760 ERBINQ96RT1 1412 aa32.68■■■□□ 2.82
LSM8-203ENST00000422760 ADGRL1O94910 1474 aa32.65■■■□□ 2.82
LSM8-203ENST00000422760 RTEL1-TNFRSF6BF6WH68 1400 aa32.64■■■□□ 2.82
LSM8-203ENST00000422760 INO80Q9ULG1 1556 aaPredicted RBP32.63■■■□□ 2.81
LSM8-203ENST00000422760 IQGAP3Q86VI3 1631 aa32.63■■■□□ 2.81
LSM8-203ENST00000422760 SPAG9O60271 1321 aaKnown RBP32.62■■■□□ 2.81
LSM8-203ENST00000422760 MAGI2Q86UL8 1455 aa32.62■■■□□ 2.81
LSM8-203ENST00000422760 AFAP1Q8N556 730 aa32.6■■■□□ 2.81
LSM8-203ENST00000422760 ATP7AQ04656 1500 aa32.59■■■□□ 2.81
LSM8-203ENST00000422760 SCAPERQ9BY12 1400 aa32.58■■■□□ 2.81
LSM8-203ENST00000422760 HIRIP3Q9BW71 556 aaPredicted RBP32.57■■■□□ 2.8
LSM8-203ENST00000422760 RIMBP3CA6NJZ7 1639 aa32.56■■■□□ 2.8
LSM8-203ENST00000422760 RIMBP3BA6NNM3 1639 aa32.56■■■□□ 2.8
LSM8-203ENST00000422760 RIMBP3Q9UFD9 1639 aa32.56■■■□□ 2.8
LSM8-203ENST00000422760 CFAP74Q9C0B2 1584 aa32.56■■■□□ 2.8
LSM8-203ENST00000422760 CD109Q6YHK3 1445 aa32.53■■■□□ 2.8
LSM8-203ENST00000422760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.49■■■□□ 2.792e-9■□□□□ 9.3
LSM8-203ENST00000422760 NBPF8Q3BBV2 869 aa32.47■■■□□ 2.79
LSM8-203ENST00000422760 DEPDC5O75140 1603 aa32.45■■■□□ 2.79
LSM8-203ENST00000422760 ZNF518AQ6AHZ1 1483 aa32.45■■■□□ 2.78
LSM8-203ENST00000422760 KIDINS220Q9ULH0 1771 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms