RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 CEP162Q5TB80 1403 aa35.21■■■■□ 3.23
TRAF4-204ENST00000422344 KIF14Q15058 1648 aa35.21■■■■□ 3.23
TRAF4-204ENST00000422344 RIMS1Q86UR5 1692 aaKnown RBP35.17■■■■□ 3.22
TRAF4-204ENST00000422344 ZMYM4Q5VZL5 1548 aa35.14■■■■□ 3.22
TRAF4-204ENST00000422344 PLCH2O75038 1416 aa35.13■■■■□ 3.21
TRAF4-204ENST00000422344 YEATS2Q9ULM3 1422 aa35.12■■■■□ 3.21
TRAF4-204ENST00000422344 MYO5CQ9NQX4 1742 aa35.12■■■■□ 3.21
TRAF4-204ENST00000422344 ZFYVE16Q7Z3T8 1539 aa35.11■■■■□ 3.21
TRAF4-204ENST00000422344 LMTK3Q96Q04 1460 aa35.11■■■■□ 3.21
TRAF4-204ENST00000422344 FBXO41Q8TF61 875 aa35.11■■■■□ 3.21
TRAF4-204ENST00000422344 LOC105371045A0A1W2PR82 267 aa35.1■■■■□ 3.21
TRAF4-204ENST00000422344 POGZQ7Z3K3 1410 aa35.09■■■■□ 3.21
TRAF4-204ENST00000422344 PLPPR3Q6T4P5 718 aa35.09■■■■□ 3.21
TRAF4-204ENST00000422344 SCAPERQ9BY12 1400 aa35.06■■■■□ 3.2
TRAF4-204ENST00000422344 SIGLEC1Q9BZZ2 1709 aa35.06■■■■□ 3.2
TRAF4-204ENST00000422344 MAGI2Q86UL8 1455 aa35.06■■■■□ 3.2
TRAF4-204ENST00000422344 EFCAB2Q5VUJ9 269 aa35.04■■■■□ 3.2
TRAF4-204ENST00000422344 MLECQ14165 292 aa35.03■■■■□ 3.2
TRAF4-204ENST00000422344 ARHGAP5Q13017 1502 aa35■■■■□ 3.19
TRAF4-204ENST00000422344 HSPA2P54652 639 aa34.98■■■■□ 3.19
TRAF4-204ENST00000422344 FER1L4A9Z1Z3 1794 aa34.92■■■■□ 3.18
TRAF4-204ENST00000422344 PREX2Q70Z35 1606 aa34.9■■■■□ 3.18
TRAF4-204ENST00000422344 ATP10AO60312 1499 aa34.9■■■■□ 3.18
TRAF4-204ENST00000422344 MTUS2Q5JR59 1369 aa34.89■■■■□ 3.18
TRAF4-204ENST00000422344 CDC42BPBQ9Y5S2 1711 aa34.87■■■■□ 3.17
TRAF4-204ENST00000422344 C9orf84Q5VXU9 1444 aa34.86■■■■□ 3.17
TRAF4-204ENST00000422344 ARHGEF12Q9NZN5 1544 aa34.82■■■■□ 3.16
TRAF4-204ENST00000422344 CDC42BPAQ5VT25 1732 aa34.82■■■■□ 3.16
TRAF4-204ENST00000422344 VPS8Q8N3P4 1428 aa34.81■■■■□ 3.16
TRAF4-204ENST00000422344 ZNF518AQ6AHZ1 1483 aa34.8■■■■□ 3.16
TRAF4-204ENST00000422344 AFAP1Q8N556 730 aa34.8■■■■□ 3.16
TRAF4-204ENST00000422344 EHBP1L1Q8N3D4 1523 aa34.79■■■■□ 3.16
TRAF4-204ENST00000422344 MYT1LQ9UL68 1186 aa34.78■■■■□ 3.16
TRAF4-204ENST00000422344 CCNB3Q8WWL7 1395 aa34.75■■■■□ 3.15
TRAF4-204ENST00000422344 CEBPAP49715 358 aaPredicted RBP34.74■■■■□ 3.15
TRAF4-204ENST00000422344 GPATCH8Q9UKJ3 1502 aaKnown RBP34.74■■■■□ 3.15
TRAF4-204ENST00000422344 KDM5CP41229 1560 aa34.74■■■■□ 3.15
TRAF4-204ENST00000422344 ABCC1P33527 1531 aa34.73■■■■□ 3.15
TRAF4-204ENST00000422344 ZNF777Q9ULD5 760 aaPredicted RBP34.72■■■■□ 3.15
TRAF4-204ENST00000422344 TIAM1Q13009 1591 aa34.68■■■■□ 3.14
TRAF4-204ENST00000422344 ITSN2Q9NZM3 1697 aa34.68■■■■□ 3.14
TRAF4-204ENST00000422344 CFDP1Q9UEE9 299 aaPredicted RBP34.68■■■■□ 3.14
TRAF4-204ENST00000422344 PREX1Q8TCU6 1659 aa34.67■■■■□ 3.14
TRAF4-204ENST00000422344 DIP2CQ9Y2E4 1556 aa34.66■■■■□ 3.14
TRAF4-204ENST00000422344 CERKQ8TCT0 537 aa34.64■■■■□ 3.14
TRAF4-204ENST00000422344 SAMD9LQ8IVG5 1584 aa34.64■■■■□ 3.14
TRAF4-204ENST00000422344 TRAPPC8Q9Y2L5 1435 aa34.63■■■■□ 3.13
TRAF4-204ENST00000422344 SUPT6HQ7KZ85 1726 aaKnown RBP34.61■■■■□ 3.13
TRAF4-204ENST00000422344 MLH3Q9UHC1 1453 aa34.6■■■■□ 3.13
TRAF4-204ENST00000422344 ABCA6Q8N139 1617 aa34.6■■■■□ 3.13
TRAF4-204ENST00000422344 PLEKHH2Q8IVE3 1493 aa34.59■■■■□ 3.13
TRAF4-204ENST00000422344 SYCP2Q9BX26 1530 aa34.59■■■■□ 3.13
TRAF4-204ENST00000422344 REREQ9P2R6 1566 aa34.58■■■■□ 3.13
TRAF4-204ENST00000422344 NCOA2Q15596 1464 aa34.56■■■■□ 3.12
TRAF4-204ENST00000422344 SETD1BQ9UPS6 1966 aaKnown RBP34.56■■■■□ 3.12
TRAF4-204ENST00000422344 UHRF1BP1Q6BDS2 1440 aa34.54■■■■□ 3.12
TRAF4-204ENST00000422344 KIAA1107Q9UPP5 1409 aa34.54■■■■□ 3.12
TRAF4-204ENST00000422344 LRRC9Q6ZRR7 1453 aa34.53■■■■□ 3.12
TRAF4-204ENST00000422344 HNRNPMP52272 730 aaKnown RBP eCLIP34.53■■■■□ 3.12
TRAF4-204ENST00000422344 MAP3K1Q13233 1512 aa34.52■■■■□ 3.12
TRAF4-204ENST00000422344 ESF1Q9H501 851 aaKnown RBP34.51■■■■□ 3.12
TRAF4-204ENST00000422344 STRCQ7RTU9 1775 aa34.49■■■■□ 3.11
TRAF4-204ENST00000422344 APLP2Q06481 763 aa34.49■■■■□ 3.11
TRAF4-204ENST00000422344 AGLP35573 1532 aa34.49■■■■□ 3.11
TRAF4-204ENST00000422344 C3P01024 1663 aa34.48■■■■□ 3.11
TRAF4-204ENST00000422344 DMRT2Q9Y5R5 561 aa34.48■■■■□ 3.11
TRAF4-204ENST00000422344 KIDINS220Q9ULH0 1771 aa34.47■■■■□ 3.11
TRAF4-204ENST00000422344 SPAG9O60271 1321 aaKnown RBP34.46■■■■□ 3.11
TRAF4-204ENST00000422344 ZNF644Q9H582 1327 aaPredicted RBP34.44■■■■□ 3.1
TRAF4-204ENST00000422344 KANK4Q5T7N3 995 aaPredicted RBP34.41■■■■□ 3.1
TRAF4-204ENST00000422344 ATP7AQ04656 1500 aa34.37■■■■□ 3.09
TRAF4-204ENST00000422344 CAMSAP2Q08AD1 1489 aa34.35■■■■□ 3.09
TRAF4-204ENST00000422344 CNTLNQ9NXG0 1405 aa34.34■■■■□ 3.09
TRAF4-204ENST00000422344 INO80Q9ULG1 1556 aaPredicted RBP34.34■■■■□ 3.09
TRAF4-204ENST00000422344 MBD5Q9P267 1494 aa34.33■■■■□ 3.09
TRAF4-204ENST00000422344 PTPRTO14522 1441 aa34.3■■■■□ 3.08
TRAF4-204ENST00000422344 CCDC141Q6ZP82 1450 aa34.27■■■■□ 3.08
TRAF4-204ENST00000422344 RSPH4AQ5TD94 716 aa34.26■■■■□ 3.08
TRAF4-204ENST00000422344 MYOM3Q5VTT5 1437 aa34.25■■■■□ 3.07
TRAF4-204ENST00000422344 A2MP01023 1474 aa34.23■■■■□ 3.07
TRAF4-204ENST00000422344 RTEL1-TNFRSF6BF6WH68 1400 aa34.22■■■■□ 3.07
TRAF4-204ENST00000422344 MROH2AA6NES4 1674 aa34.22■■■■□ 3.07
TRAF4-204ENST00000422344 ZMYM3Q14202 1370 aa34.22■■■■□ 3.07
TRAF4-204ENST00000422344 NCOA1Q15788 1441 aa34.21■■■■□ 3.07
TRAF4-204ENST00000422344 MIA2Q96PC5 1412 aa34.21■■■■□ 3.07
TRAF4-204ENST00000422344 ADGBQ8N7X0 1667 aa34.2■■■■□ 3.07
TRAF4-204ENST00000422344 ARHGEF5Q12774 1597 aa34.19■■■■□ 3.06
TRAF4-204ENST00000422344 NPATQ14207 1427 aa34.19■■■■□ 3.06
TRAF4-204ENST00000422344 PLXNC1O60486 1568 aa34.17■■■■□ 3.06
TRAF4-204ENST00000422344 TSPY4P0CV99 314 aa34.15■■■■□ 3.06
TRAF4-204ENST00000422344 TSPY10P0CW01 314 aa34.15■■■■□ 3.06
TRAF4-204ENST00000422344 CLTCQ00610 1675 aaKnown RBP34.15■■■■□ 3.06
TRAF4-204ENST00000422344 CAMSAP1Q5T5Y3 1602 aa34.14■■■■□ 3.06
TRAF4-204ENST00000422344 GGT6Q6P531 493 aa34.13■■■■□ 3.05
TRAF4-204ENST00000422344 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
TRAF4-204ENST00000422344 NCKAP5LQ9HCH0 1330 aa34.06■■■■□ 3.04
TRAF4-204ENST00000422344 DHX29Q7Z478 1369 aaKnown RBP34.06■■■■□ 3.04
TRAF4-204ENST00000422344 DISP3Q9P2K9 1392 aa34.06■■■■□ 3.04
TRAF4-204ENST00000422344 PTPN23Q9H3S7 1636 aa34.04■■■■□ 3.04
TRAF4-204ENST00000422344 MYO3AQ8NEV4 1616 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms