RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
NIFKP3-201ENST00000417799 IER5LQ5T953 404 aa11.54□□□□□ -0.56
NIFKP3-201ENST00000417799 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
NIFKP3-201ENST00000417799 MFSD10Q14728 455 aa11.52□□□□□ -0.57
NIFKP3-201ENST00000417799 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
NIFKP3-201ENST00000417799 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
NIFKP3-201ENST00000417799 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
NIFKP3-201ENST00000417799 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
NIFKP3-201ENST00000417799 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
NIFKP3-201ENST00000417799 C7P10643 843 aa11.47□□□□□ -0.57
NIFKP3-201ENST00000417799 PLCG2P16885 1265 aa11.47□□□□□ -0.57
NIFKP3-201ENST00000417799 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
NIFKP3-201ENST00000417799 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
NIFKP3-201ENST00000417799 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
NIFKP3-201ENST00000417799 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
NIFKP3-201ENST00000417799 G3V3G9 751 aa11.44□□□□□ -0.58
NIFKP3-201ENST00000417799 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
NIFKP3-201ENST00000417799 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
NIFKP3-201ENST00000417799 SEC24BO95487 1268 aa11.42□□□□□ -0.58
NIFKP3-201ENST00000417799 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
NIFKP3-201ENST00000417799 TMEM121BQ9BXQ6 578 aaPredicted RBP11.42□□□□□ -0.58
NIFKP3-201ENST00000417799 CAMK2BQ13554 666 aa11.41□□□□□ -0.58
NIFKP3-201ENST00000417799 TMC2Q8TDI7 906 aa11.4□□□□□ -0.58
NIFKP3-201ENST00000417799 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
NIFKP3-201ENST00000417799 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
NIFKP3-201ENST00000417799 ARIH1Q9Y4X5 557 aaPredicted RBP11.38□□□□□ -0.59
NIFKP3-201ENST00000417799 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
NIFKP3-201ENST00000417799 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
NIFKP3-201ENST00000417799 DSG2Q14126 1118 aa11.36□□□□□ -0.59
NIFKP3-201ENST00000417799 SEMA3EO15041 775 aa11.35□□□□□ -0.59
NIFKP3-201ENST00000417799 FOXK1P85037 733 aa11.35□□□□□ -0.59
NIFKP3-201ENST00000417799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
NIFKP3-201ENST00000417799 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
NIFKP3-201ENST00000417799 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
NIFKP3-201ENST00000417799 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
NIFKP3-201ENST00000417799 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
NIFKP3-201ENST00000417799 ABCC9O60706 1549 aa11.31□□□□□ -0.6
NIFKP3-201ENST00000417799 KIF3CO14782 793 aa11.31□□□□□ -0.6
NIFKP3-201ENST00000417799 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
NIFKP3-201ENST00000417799 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
NIFKP3-201ENST00000417799 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
NIFKP3-201ENST00000417799 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
NIFKP3-201ENST00000417799 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.61
NIFKP3-201ENST00000417799 DPYSL4O14531 572 aa11.26□□□□□ -0.61
NIFKP3-201ENST00000417799 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
NIFKP3-201ENST00000417799 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
NIFKP3-201ENST00000417799 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
NIFKP3-201ENST00000417799 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
NIFKP3-201ENST00000417799 PDIA6Q15084 440 aa11.2□□□□□ -0.62
NIFKP3-201ENST00000417799 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
NIFKP3-201ENST00000417799 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
NIFKP3-201ENST00000417799 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
NIFKP3-201ENST00000417799 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
NIFKP3-201ENST00000417799 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
NIFKP3-201ENST00000417799 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
NIFKP3-201ENST00000417799 RBM26Q5T8P6 1007 aaKnown RBP11.12□□□□□ -0.63
NIFKP3-201ENST00000417799 TBC1D12O60347 775 aa11.1□□□□□ -0.63
NIFKP3-201ENST00000417799 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
NIFKP3-201ENST00000417799 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
NIFKP3-201ENST00000417799 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
NIFKP3-201ENST00000417799 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
NIFKP3-201ENST00000417799 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
NIFKP3-201ENST00000417799 ZMYND10O75800 440 aa11.06□□□□□ -0.64
NIFKP3-201ENST00000417799 SLC34A2O95436 690 aa11.06□□□□□ -0.64
NIFKP3-201ENST00000417799 EVI5O60447 810 aa11.05□□□□□ -0.64
NIFKP3-201ENST00000417799 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
NIFKP3-201ENST00000417799 PTGER2P43116 358 aa11.04□□□□□ -0.64
NIFKP3-201ENST00000417799 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
NIFKP3-201ENST00000417799 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
NIFKP3-201ENST00000417799 NACADO15069 1562 aa11.03□□□□□ -0.64
NIFKP3-201ENST00000417799 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
NIFKP3-201ENST00000417799 DDX12PQ92771 950 aa11.02□□□□□ -0.65
NIFKP3-201ENST00000417799 OSBPP22059 807 aa11□□□□□ -0.65
NIFKP3-201ENST00000417799 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
NIFKP3-201ENST00000417799 NUTM2FA1L443 756 aa10.97□□□□□ -0.65
NIFKP3-201ENST00000417799 ST18O60284 1047 aa10.97□□□□□ -0.65
NIFKP3-201ENST00000417799 KRI1Q8N9T8 703 aaKnown RBP10.97□□□□□ -0.65
NIFKP3-201ENST00000417799 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
NIFKP3-201ENST00000417799 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
NIFKP3-201ENST00000417799 SLAIN1Q8ND83 568 aa10.95□□□□□ -0.66
NIFKP3-201ENST00000417799 GPR37O15354 613 aa10.93□□□□□ -0.66
NIFKP3-201ENST00000417799 BRPF1P55201 1214 aaPredicted RBP10.92□□□□□ -0.66
NIFKP3-201ENST00000417799 AK7Q96M32 723 aa10.92□□□□□ -0.66
NIFKP3-201ENST00000417799 PHF14O94880 888 aa10.91□□□□□ -0.66
NIFKP3-201ENST00000417799 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
NIFKP3-201ENST00000417799 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
NIFKP3-201ENST00000417799 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
NIFKP3-201ENST00000417799 EPAS1Q99814 870 aa10.9□□□□□ -0.66
NIFKP3-201ENST00000417799 FCHSD2O94868 740 aa10.88□□□□□ -0.67
NIFKP3-201ENST00000417799 HOXB3P14651 431 aaPredicted RBP10.88□□□□□ -0.67
NIFKP3-201ENST00000417799 MMRN1Q13201 1228 aa10.88□□□□□ -0.67
NIFKP3-201ENST00000417799 KDM4FA0A1W2PPD8 638 aa10.87□□□□□ -0.67
NIFKP3-201ENST00000417799 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
NIFKP3-201ENST00000417799 GNPATO15228 680 aa10.87□□□□□ -0.67
NIFKP3-201ENST00000417799 HIC1Q14526 733 aa10.87□□□□□ -0.67
NIFKP3-201ENST00000417799 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
NIFKP3-201ENST00000417799 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
NIFKP3-201ENST00000417799 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
NIFKP3-201ENST00000417799 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
NIFKP3-201ENST00000417799 MAP3K7O43318 606 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms