RNA–Protein interactions for RNA: ENST00000416002.1

AF240627.1-201, humanhuman

TSL 3 BASIC

Gene AF240627.1, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF240627.1-201ENST00000416002 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
AF240627.1-201ENST00000416002 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
AF240627.1-201ENST00000416002 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
AF240627.1-201ENST00000416002 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
AF240627.1-201ENST00000416002 SPNS2Q8IVW8 549 aa13.09□□□□□ -0.31
AF240627.1-201ENST00000416002 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
AF240627.1-201ENST00000416002 ERBB3P21860 1342 aa13.08□□□□□ -0.32
AF240627.1-201ENST00000416002 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
AF240627.1-201ENST00000416002 KRTAP3-3Q9BYR6 98 aa13.03□□□□□ -0.32
AF240627.1-201ENST00000416002 KRTAP3-2Q9BYR7 98 aa13.03□□□□□ -0.32
AF240627.1-201ENST00000416002 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
AF240627.1-201ENST00000416002 C2orf72A6NCS6 295 aa12.98□□□□□ -0.33
AF240627.1-201ENST00000416002 KIF3CO14782 793 aa12.98□□□□□ -0.33
AF240627.1-201ENST00000416002 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
AF240627.1-201ENST00000416002 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
AF240627.1-201ENST00000416002 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
AF240627.1-201ENST00000416002 PPP1R37O75864 691 aa12.95□□□□□ -0.34
AF240627.1-201ENST00000416002 TMC2Q8TDI7 906 aa12.95□□□□□ -0.34
AF240627.1-201ENST00000416002 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
AF240627.1-201ENST00000416002 ZNF687Q8N1G0 1237 aa12.91□□□□□ -0.34
AF240627.1-201ENST00000416002 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.35
AF240627.1-201ENST00000416002 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
AF240627.1-201ENST00000416002 SLC34A2O95436 690 aa12.86□□□□□ -0.35
AF240627.1-201ENST00000416002 NUDT7P0C024 238 aa12.82□□□□□ -0.36
AF240627.1-201ENST00000416002 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
AF240627.1-201ENST00000416002 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
AF240627.1-201ENST00000416002 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
AF240627.1-201ENST00000416002 FOXK1P85037 733 aa12.76□□□□□ -0.37
AF240627.1-201ENST00000416002 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
AF240627.1-201ENST00000416002 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
AF240627.1-201ENST00000416002 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
AF240627.1-201ENST00000416002 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
AF240627.1-201ENST00000416002 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
AF240627.1-201ENST00000416002 PTCD2Q8WV60 388 aaKnown RBP12.71□□□□□ -0.37
AF240627.1-201ENST00000416002 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
AF240627.1-201ENST00000416002 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
AF240627.1-201ENST00000416002 PBX2P40425 430 aa12.69□□□□□ -0.38
AF240627.1-201ENST00000416002 PTGER2P43116 358 aa12.69□□□□□ -0.38
AF240627.1-201ENST00000416002 DSG2Q14126 1118 aa12.69□□□□□ -0.38
AF240627.1-201ENST00000416002 TBC1D12O60347 775 aa12.68□□□□□ -0.38
AF240627.1-201ENST00000416002 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
AF240627.1-201ENST00000416002 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
AF240627.1-201ENST00000416002 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
AF240627.1-201ENST00000416002 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
AF240627.1-201ENST00000416002 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
AF240627.1-201ENST00000416002 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
AF240627.1-201ENST00000416002 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
AF240627.1-201ENST00000416002 CRISPLD2Q9H0B8 497 aa12.6□□□□□ -0.39
AF240627.1-201ENST00000416002 PDE4AP27815 886 aa12.59□□□□□ -0.39
AF240627.1-201ENST00000416002 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
AF240627.1-201ENST00000416002 PPP1R15BQ5SWA1 713 aa12.56□□□□□ -0.4
AF240627.1-201ENST00000416002 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
AF240627.1-201ENST00000416002 OXER1Q8TDS5 423 aa12.55□□□□□ -0.4
AF240627.1-201ENST00000416002 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
AF240627.1-201ENST00000416002 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
AF240627.1-201ENST00000416002 ADGRD1Q6QNK2 874 aa12.49□□□□□ -0.41
AF240627.1-201ENST00000416002 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
AF240627.1-201ENST00000416002 PSEN2P49810 448 aa12.48□□□□□ -0.41
AF240627.1-201ENST00000416002 TK2O00142 265 aa12.47□□□□□ -0.41
AF240627.1-201ENST00000416002 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
AF240627.1-201ENST00000416002 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
AF240627.1-201ENST00000416002 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
AF240627.1-201ENST00000416002 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
AF240627.1-201ENST00000416002 MFSD10Q14728 455 aa12.41□□□□□ -0.42
AF240627.1-201ENST00000416002 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
AF240627.1-201ENST00000416002 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
AF240627.1-201ENST00000416002 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
AF240627.1-201ENST00000416002 HRO43593 1189 aa12.39□□□□□ -0.43
AF240627.1-201ENST00000416002 EVI5O60447 810 aa12.39□□□□□ -0.43
AF240627.1-201ENST00000416002 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
AF240627.1-201ENST00000416002 FOSBP53539 338 aa12.37□□□□□ -0.43
AF240627.1-201ENST00000416002 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
AF240627.1-201ENST00000416002 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
AF240627.1-201ENST00000416002 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
AF240627.1-201ENST00000416002 PTPREP23469 700 aa12.34□□□□□ -0.43
AF240627.1-201ENST00000416002 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
AF240627.1-201ENST00000416002 JPH4Q96JJ6 628 aa12.34□□□□□ -0.43
AF240627.1-201ENST00000416002 EMILIN3Q9NT22 766 aa12.33□□□□□ -0.44
AF240627.1-201ENST00000416002 VPS9D1Q9Y2B5 631 aa12.33□□□□□ -0.44
AF240627.1-201ENST00000416002 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
AF240627.1-201ENST00000416002 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
AF240627.1-201ENST00000416002 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
AF240627.1-201ENST00000416002 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
AF240627.1-201ENST00000416002 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
AF240627.1-201ENST00000416002 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
AF240627.1-201ENST00000416002 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
AF240627.1-201ENST00000416002 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
AF240627.1-201ENST00000416002 CAMK2BQ13554 666 aa12.22□□□□□ -0.45
AF240627.1-201ENST00000416002 PCDHGA10Q9Y5H3 936 aa12.22□□□□□ -0.45
AF240627.1-201ENST00000416002 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
AF240627.1-201ENST00000416002 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
AF240627.1-201ENST00000416002 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
AF240627.1-201ENST00000416002 PHF14O94880 888 aa12.2□□□□□ -0.46
AF240627.1-201ENST00000416002 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
AF240627.1-201ENST00000416002 FBXW7Q969H0 707 aa12.19□□□□□ -0.46
AF240627.1-201ENST00000416002 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
AF240627.1-201ENST00000416002 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
AF240627.1-201ENST00000416002 DPYSL4O14531 572 aa12.17□□□□□ -0.46
AF240627.1-201ENST00000416002 PTPN5P54829 565 aa12.16□□□□□ -0.46
AF240627.1-201ENST00000416002 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms