RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 MICALL2Q8IY33 904 aa11.97□□□□□ -0.49
CSTF1-202ENST00000415828 SNPHO15079 494 aa11.94□□□□□ -0.5
CSTF1-202ENST00000415828 ST18O60284 1047 aa11.94□□□□□ -0.5
CSTF1-202ENST00000415828 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
CSTF1-202ENST00000415828 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
CSTF1-202ENST00000415828 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
CSTF1-202ENST00000415828 CUX2O14529 1486 aa11.83□□□□□ -0.52
CSTF1-202ENST00000415828 NACADO15069 1562 aa11.82□□□□□ -0.52
CSTF1-202ENST00000415828 PPP1R37O75864 691 aa11.81□□□□□ -0.52
CSTF1-202ENST00000415828 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
CSTF1-202ENST00000415828 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
CSTF1-202ENST00000415828 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
CSTF1-202ENST00000415828 DOK7Q18PE1 504 aa11.75□□□□□ -0.53
CSTF1-202ENST00000415828 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
CSTF1-202ENST00000415828 EMP3P54852 163 aa11.73□□□□□ -0.53
CSTF1-202ENST00000415828 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
CSTF1-202ENST00000415828 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
CSTF1-202ENST00000415828 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
CSTF1-202ENST00000415828 KIF3CO14782 793 aa11.7□□□□□ -0.54
CSTF1-202ENST00000415828 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
CSTF1-202ENST00000415828 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
CSTF1-202ENST00000415828 TMC2Q8TDI7 906 aa11.67□□□□□ -0.54
CSTF1-202ENST00000415828 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
CSTF1-202ENST00000415828 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
CSTF1-202ENST00000415828 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
CSTF1-202ENST00000415828 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
CSTF1-202ENST00000415828 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
CSTF1-202ENST00000415828 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
CSTF1-202ENST00000415828 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
CSTF1-202ENST00000415828 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
CSTF1-202ENST00000415828 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
CSTF1-202ENST00000415828 ERBB3P21860 1342 aa11.59□□□□□ -0.55
CSTF1-202ENST00000415828 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
CSTF1-202ENST00000415828 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.56
CSTF1-202ENST00000415828 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
CSTF1-202ENST00000415828 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
CSTF1-202ENST00000415828 FOXK1P85037 733 aa11.53□□□□□ -0.56
CSTF1-202ENST00000415828 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
CSTF1-202ENST00000415828 SLC34A2O95436 690 aa11.52□□□□□ -0.57
CSTF1-202ENST00000415828 DSG2Q14126 1118 aa11.52□□□□□ -0.57
CSTF1-202ENST00000415828 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
CSTF1-202ENST00000415828 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
CSTF1-202ENST00000415828 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
CSTF1-202ENST00000415828 NUDT7P0C024 238 aa11.49□□□□□ -0.57
CSTF1-202ENST00000415828 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
CSTF1-202ENST00000415828 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
CSTF1-202ENST00000415828 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
CSTF1-202ENST00000415828 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
CSTF1-202ENST00000415828 MMRN1Q13201 1228 aa11.47□□□□□ -0.57
CSTF1-202ENST00000415828 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
CSTF1-202ENST00000415828 SHROOM4Q9ULL8 1493 aa11.46□□□□□ -0.57
CSTF1-202ENST00000415828 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
CSTF1-202ENST00000415828 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
CSTF1-202ENST00000415828 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
CSTF1-202ENST00000415828 PDE4AP27815 886 aa11.44□□□□□ -0.58
CSTF1-202ENST00000415828 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
CSTF1-202ENST00000415828 SPNS2Q8IVW8 549 aa11.43□□□□□ -0.58
CSTF1-202ENST00000415828 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
CSTF1-202ENST00000415828 LHX6Q9UPM6 363 aa11.42□□□□□ -0.58
CSTF1-202ENST00000415828 ZNF687Q8N1G0 1237 aa11.41□□□□□ -0.58
CSTF1-202ENST00000415828 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
CSTF1-202ENST00000415828 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
CSTF1-202ENST00000415828 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
CSTF1-202ENST00000415828 TBC1D12O60347 775 aa11.37□□□□□ -0.59
CSTF1-202ENST00000415828 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
CSTF1-202ENST00000415828 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
CSTF1-202ENST00000415828 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
CSTF1-202ENST00000415828 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
CSTF1-202ENST00000415828 OXER1Q8TDS5 423 aa11.34□□□□□ -0.59
CSTF1-202ENST00000415828 MFSD10Q14728 455 aa11.33□□□□□ -0.6
CSTF1-202ENST00000415828 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
CSTF1-202ENST00000415828 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
CSTF1-202ENST00000415828 PSDA5PKW4 1024 aaPredicted RBP11.27□□□□□ -0.61
CSTF1-202ENST00000415828 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
CSTF1-202ENST00000415828 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
CSTF1-202ENST00000415828 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
CSTF1-202ENST00000415828 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
CSTF1-202ENST00000415828 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-202ENST00000415828 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
CSTF1-202ENST00000415828 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
CSTF1-202ENST00000415828 PBX2P40425 430 aa11.24□□□□□ -0.61
CSTF1-202ENST00000415828 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
CSTF1-202ENST00000415828 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSTF1-202ENST00000415828 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
CSTF1-202ENST00000415828 NESP48681 1621 aa11.24□□□□□ -0.61
CSTF1-202ENST00000415828 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
CSTF1-202ENST00000415828 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
CSTF1-202ENST00000415828 EVI5O60447 810 aa11.22□□□□□ -0.61
CSTF1-202ENST00000415828 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
CSTF1-202ENST00000415828 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
CSTF1-202ENST00000415828 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
CSTF1-202ENST00000415828 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-202ENST00000415828 PSEN2P49810 448 aa11.18□□□□□ -0.62
CSTF1-202ENST00000415828 CAMK2BQ13554 666 aa11.17□□□□□ -0.62
CSTF1-202ENST00000415828 MYT1LQ9UL68 1186 aa11.17□□□□□ -0.62
CSTF1-202ENST00000415828 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
CSTF1-202ENST00000415828 FOSBP53539 338 aa11.15□□□□□ -0.62
CSTF1-202ENST00000415828 DMRTA1Q5VZB9 504 aa11.15□□□□□ -0.62
CSTF1-202ENST00000415828 RNF166Q96A37 237 aaPredicted RBP11.14□□□□□ -0.63
CSTF1-202ENST00000415828 KCNK17Q96T54 332 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms