RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 HS3ST6Q96QI5 342 aa14.13□□□□□ -0.15
PTCD2P2-201ENST00000415579 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
PTCD2P2-201ENST00000415579 PPP1R37O75864 691 aa14.09□□□□□ -0.15
PTCD2P2-201ENST00000415579 HOXB1P14653 301 aaPredicted RBP14.08□□□□□ -0.16
PTCD2P2-201ENST00000415579 C2orf72A6NCS6 295 aa14.02□□□□□ -0.17
PTCD2P2-201ENST00000415579 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
PTCD2P2-201ENST00000415579 ERBB3P21860 1342 aa14.01□□□□□ -0.17
PTCD2P2-201ENST00000415579 RIMBP2O15034 1052 aa14.01□□□□□ -0.17
PTCD2P2-201ENST00000415579 KRTAP3-3Q9BYR6 98 aa14.01□□□□□ -0.17
PTCD2P2-201ENST00000415579 KRTAP3-2Q9BYR7 98 aa14.01□□□□□ -0.17
PTCD2P2-201ENST00000415579 SPNS2Q8IVW8 549 aa14□□□□□ -0.17
PTCD2P2-201ENST00000415579 KHSRPQ92945 711 aaKnown RBP eCLIP14□□□□□ -0.17
PTCD2P2-201ENST00000415579 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
PTCD2P2-201ENST00000415579 GPR153Q6NV75 609 aa13.99□□□□□ -0.17
PTCD2P2-201ENST00000415579 HS6ST3Q8IZP7 471 aa13.99□□□□□ -0.17
PTCD2P2-201ENST00000415579 KIF3CO14782 793 aa13.98□□□□□ -0.17
PTCD2P2-201ENST00000415579 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
PTCD2P2-201ENST00000415579 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
PTCD2P2-201ENST00000415579 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
PTCD2P2-201ENST00000415579 NISCHQ9Y2I1 1504 aa13.91□□□□□ -0.18
PTCD2P2-201ENST00000415579 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
PTCD2P2-201ENST00000415579 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
PTCD2P2-201ENST00000415579 NUDT7P0C024 238 aa13.83□□□□□ -0.2
PTCD2P2-201ENST00000415579 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
PTCD2P2-201ENST00000415579 PCDHGA4Q9Y5G9 962 aa13.8□□□□□ -0.2
PTCD2P2-201ENST00000415579 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
PTCD2P2-201ENST00000415579 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
PTCD2P2-201ENST00000415579 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
PTCD2P2-201ENST00000415579 SLC34A2O95436 690 aa13.74□□□□□ -0.21
PTCD2P2-201ENST00000415579 PLPP6Q8IY26 295 aa13.74□□□□□ -0.21
PTCD2P2-201ENST00000415579 LHX6Q9UPM6 363 aa13.74□□□□□ -0.21
PTCD2P2-201ENST00000415579 DSG2Q14126 1118 aa13.73□□□□□ -0.21
PTCD2P2-201ENST00000415579 GPHNQ9NQX3 736 aaPredicted RBP13.73□□□□□ -0.21
PTCD2P2-201ENST00000415579 FOXK1P85037 733 aa13.71□□□□□ -0.21
PTCD2P2-201ENST00000415579 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
PTCD2P2-201ENST00000415579 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
PTCD2P2-201ENST00000415579 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
PTCD2P2-201ENST00000415579 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
PTCD2P2-201ENST00000415579 PTCD2Q8WV60 388 aaKnown RBP13.64□□□□□ -0.23
PTCD2P2-201ENST00000415579 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
PTCD2P2-201ENST00000415579 RYDENQ9NUL5 291 aaKnown RBP13.61□□□□□ -0.23
PTCD2P2-201ENST00000415579 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
PTCD2P2-201ENST00000415579 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
PTCD2P2-201ENST00000415579 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
PTCD2P2-201ENST00000415579 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTCD2P2-201ENST00000415579 RNF166Q96A37 237 aaPredicted RBP13.57□□□□□ -0.24
PTCD2P2-201ENST00000415579 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
PTCD2P2-201ENST00000415579 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
PTCD2P2-201ENST00000415579 PDE4AP27815 886 aa13.52□□□□□ -0.25
PTCD2P2-201ENST00000415579 LARP6Q9BRS8 491 aaKnown RBP13.52□□□□□ -0.25
PTCD2P2-201ENST00000415579 TBC1D12O60347 775 aa13.51□□□□□ -0.25
PTCD2P2-201ENST00000415579 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
PTCD2P2-201ENST00000415579 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
PTCD2P2-201ENST00000415579 PSEN2P49810 448 aa13.49□□□□□ -0.25
PTCD2P2-201ENST00000415579 PBX2P40425 430 aa13.48□□□□□ -0.25
PTCD2P2-201ENST00000415579 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
PTCD2P2-201ENST00000415579 DMRTA1Q5VZB9 504 aa13.46□□□□□ -0.25
PTCD2P2-201ENST00000415579 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
PTCD2P2-201ENST00000415579 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
PTCD2P2-201ENST00000415579 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
PTCD2P2-201ENST00000415579 ADGRD1Q6QNK2 874 aa13.41□□□□□ -0.26
PTCD2P2-201ENST00000415579 PTGER2P43116 358 aa13.4□□□□□ -0.26
PTCD2P2-201ENST00000415579 ZNF454Q8N9F8 522 aa13.4□□□□□ -0.26
PTCD2P2-201ENST00000415579 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
PTCD2P2-201ENST00000415579 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
PTCD2P2-201ENST00000415579 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
PTCD2P2-201ENST00000415579 MFSD10Q14728 455 aa13.37□□□□□ -0.27
PTCD2P2-201ENST00000415579 EVI5O60447 810 aa13.36□□□□□ -0.27
PTCD2P2-201ENST00000415579 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
PTCD2P2-201ENST00000415579 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
PTCD2P2-201ENST00000415579 FOSBP53539 338 aa13.31□□□□□ -0.28
PTCD2P2-201ENST00000415579 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
PTCD2P2-201ENST00000415579 HRO43593 1189 aa13.3□□□□□ -0.28
PTCD2P2-201ENST00000415579 TK2O00142 265 aa13.28□□□□□ -0.28
PTCD2P2-201ENST00000415579 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
PTCD2P2-201ENST00000415579 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
PTCD2P2-201ENST00000415579 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
PTCD2P2-201ENST00000415579 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
PTCD2P2-201ENST00000415579 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
PTCD2P2-201ENST00000415579 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
PTCD2P2-201ENST00000415579 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
PTCD2P2-201ENST00000415579 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
PTCD2P2-201ENST00000415579 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
PTCD2P2-201ENST00000415579 PTPREP23469 700 aa13.21□□□□□ -0.29
PTCD2P2-201ENST00000415579 DPYSL4O14531 572 aa13.2□□□□□ -0.3
PTCD2P2-201ENST00000415579 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
PTCD2P2-201ENST00000415579 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
PTCD2P2-201ENST00000415579 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
PTCD2P2-201ENST00000415579 CAMK2BQ13554 666 aa13.18□□□□□ -0.3
PTCD2P2-201ENST00000415579 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
PTCD2P2-201ENST00000415579 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
PTCD2P2-201ENST00000415579 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
PTCD2P2-201ENST00000415579 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
PTCD2P2-201ENST00000415579 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
PTCD2P2-201ENST00000415579 COL9A1P20849 921 aa13.12□□□□□ -0.31
PTCD2P2-201ENST00000415579 PTPN5P54829 565 aa13.11□□□□□ -0.31
PTCD2P2-201ENST00000415579 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
PTCD2P2-201ENST00000415579 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
PTCD2P2-201ENST00000415579 DDX12PQ92771 950 aa13.1□□□□□ -0.31
PTCD2P2-201ENST00000415579 PHF14O94880 888 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms