RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 DNMT1P26358 1616 aaKnown RBP28.05■■■□□ 2.08
PPM1N-206ENST00000415077 ABCC5O15440 1437 aa28.04■■■□□ 2.08
PPM1N-206ENST00000415077 RRP7BPQ9NSQ0 103 aa28.03■■■□□ 2.08
PPM1N-206ENST00000415077 AKNAQ7Z591 1439 aa28■■■□□ 2.07
PPM1N-206ENST00000415077 KCNH8Q96L42 1107 aa28■■■□□ 2.07
PPM1N-206ENST00000415077 ROCK1Q13464 1354 aa27.97■■■□□ 2.07
PPM1N-206ENST00000415077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.96■■■□□ 2.07
PPM1N-206ENST00000415077 GCC2Q8IWJ2 1684 aa27.95■■■□□ 2.06
PPM1N-206ENST00000415077 TTC37Q6PGP7 1564 aa27.94■■■□□ 2.06
PPM1N-206ENST00000415077 PREX2Q70Z35 1606 aa27.93■■■□□ 2.06
PPM1N-206ENST00000415077 CDC42BPBQ9Y5S2 1711 aa27.92■■■□□ 2.06
PPM1N-206ENST00000415077 MAPKBP1O60336 1514 aa27.92■■■□□ 2.06
PPM1N-206ENST00000415077 ARHGAP5Q13017 1502 aa27.86■■■□□ 2.05
PPM1N-206ENST00000415077 MYO5CQ9NQX4 1742 aa27.86■■■□□ 2.05
PPM1N-206ENST00000415077 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
PPM1N-206ENST00000415077 WDR7Q9Y4E6 1490 aa27.85■■■□□ 2.05
PPM1N-206ENST00000415077 HNRNPMP52272 730 aaKnown RBP eCLIP27.84■■■□□ 2.05
PPM1N-206ENST00000415077 SAMD9LQ8IVG5 1584 aa27.84■■■□□ 2.05
PPM1N-206ENST00000415077 NPM1P06748 294 aaKnown RBP eCLIP27.83■■■□□ 2.05
PPM1N-206ENST00000415077 NCOA1Q15788 1441 aa27.82■■■□□ 2.04
PPM1N-206ENST00000415077 KDM6BO15054 1643 aa27.82■■■□□ 2.04
PPM1N-206ENST00000415077 ADGBQ8N7X0 1667 aa27.81■■■□□ 2.04
PPM1N-206ENST00000415077 TSPY4P0CV99 314 aa27.81■■■□□ 2.04
PPM1N-206ENST00000415077 TSPY10P0CW01 314 aa27.81■■■□□ 2.04
PPM1N-206ENST00000415077 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
PPM1N-206ENST00000415077 PLCH2O75038 1416 aa27.81■■■□□ 2.04
PPM1N-206ENST00000415077 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
PPM1N-206ENST00000415077 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
PPM1N-206ENST00000415077 ARHGEF5Q12774 1597 aa27.8■■■□□ 2.04
PPM1N-206ENST00000415077 RSPH4AQ5TD94 716 aa27.79■■■□□ 2.04
PPM1N-206ENST00000415077 TRIM52Q96A61 297 aa27.79■■■□□ 2.04
PPM1N-206ENST00000415077 SHANK2Q9UPX8 1470 aa27.79■■■□□ 2.04
PPM1N-206ENST00000415077 ACIN1Q9UKV3 1341 aaKnown RBP27.79■■■□□ 2.04
PPM1N-206ENST00000415077 ASXL2Q76L83 1435 aa27.78■■■□□ 2.04
PPM1N-206ENST00000415077 C9orf84Q5VXU9 1444 aa27.77■■■□□ 2.04
PPM1N-206ENST00000415077 EFCAB2Q5VUJ9 269 aa27.75■■■□□ 2.03
PPM1N-206ENST00000415077 CCDC141Q6ZP82 1450 aa27.74■■■□□ 2.03
PPM1N-206ENST00000415077 PLEKHH2Q8IVE3 1493 aa27.74■■■□□ 2.03
PPM1N-206ENST00000415077 SYCP2Q9BX26 1530 aa27.73■■■□□ 2.03
PPM1N-206ENST00000415077 KIAA1107Q9UPP5 1409 aa27.73■■■□□ 2.03
PPM1N-206ENST00000415077 SIN3AQ96ST3 1273 aa27.72■■■□□ 2.03
PPM1N-206ENST00000415077 NEUROD1Q13562 356 aa27.7■■■□□ 2.03
PPM1N-206ENST00000415077 ARAP3Q8WWN8 1544 aa27.68■■■□□ 2.02
PPM1N-206ENST00000415077 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
PPM1N-206ENST00000415077 MPHOSPH9Q99550 1183 aa27.66■■■□□ 2.02
PPM1N-206ENST00000415077 ANKRD50Q9ULJ7 1429 aa27.66■■■□□ 2.02
PPM1N-206ENST00000415077 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
PPM1N-206ENST00000415077 ARHGEF12Q9NZN5 1544 aa27.62■■■□□ 2.01
PPM1N-206ENST00000415077 KIF15Q9NS87 1388 aa27.62■■■□□ 2.01
PPM1N-206ENST00000415077 TIMELESSQ9UNS1 1208 aa27.62■■■□□ 2.01
PPM1N-206ENST00000415077 RIMBP3CA6NJZ7 1639 aa27.62■■■□□ 2.01
PPM1N-206ENST00000415077 RIMBP3BA6NNM3 1639 aa27.62■■■□□ 2.01
PPM1N-206ENST00000415077 RIMBP3Q9UFD9 1639 aa27.62■■■□□ 2.01
PPM1N-206ENST00000415077 DENND4BO75064 1496 aaPredicted RBP27.61■■■□□ 2.01
PPM1N-206ENST00000415077 ABCC1P33527 1531 aa27.6■■■□□ 2.01
PPM1N-206ENST00000415077 MAST1Q9Y2H9 1570 aa27.59■■■□□ 2.01
PPM1N-206ENST00000415077 FANCAO15360 1455 aa27.57■■■□□ 2
PPM1N-206ENST00000415077 ZNF316A6NFI3 1004 aaPredicted RBP27.57■■■□□ 2
PPM1N-206ENST00000415077 SLC4A1APQ9BWU0 796 aaKnown RBP27.57■■■□□ 2
PPM1N-206ENST00000415077 TRAPPC8Q9Y2L5 1435 aa27.52■■■□□ 2
PPM1N-206ENST00000415077 FOXD1Q16676 465 aa27.5■■□□□ 1.99
PPM1N-206ENST00000415077 PZPP20742 1482 aa27.5■■□□□ 1.99
PPM1N-206ENST00000415077 PLXNC1O60486 1568 aa27.49■■□□□ 1.99
PPM1N-206ENST00000415077 TONSLQ96HA7 1378 aa27.49■■□□□ 1.99
PPM1N-206ENST00000415077 CD109Q6YHK3 1445 aa27.48■■□□□ 1.99
PPM1N-206ENST00000415077 AFAP1Q8N556 730 aa27.48■■□□□ 1.99
PPM1N-206ENST00000415077 NUP155O75694 1391 aa27.46■■□□□ 1.99
PPM1N-206ENST00000415077 ADGRL1O94910 1474 aa27.46■■□□□ 1.99
PPM1N-206ENST00000415077 SPAG9O60271 1321 aaKnown RBP27.45■■□□□ 1.99
PPM1N-206ENST00000415077 ANKRD30BQ9BXX2 1392 aa27.43■■□□□ 1.98
PPM1N-206ENST00000415077 SCAPERQ9BY12 1400 aa27.43■■□□□ 1.98
PPM1N-206ENST00000415077 PPP1R15AO75807 674 aaPredicted RBP27.42■■□□□ 1.98
PPM1N-206ENST00000415077 RTEL1-TNFRSF6BF6WH68 1400 aa27.41■■□□□ 1.98
PPM1N-206ENST00000415077 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
PPM1N-206ENST00000415077 KDM5DQ9BY66 1539 aa27.39■■□□□ 1.98
PPM1N-206ENST00000415077 PKD2Q13563 968 aa27.39■■□□□ 1.98
PPM1N-206ENST00000415077 ZFYVE16Q7Z3T8 1539 aa27.36■■□□□ 1.97
PPM1N-206ENST00000415077 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
PPM1N-206ENST00000415077 ERBINQ96RT1 1412 aa27.36■■□□□ 1.97
PPM1N-206ENST00000415077 DIEXFQ68CQ4 756 aaKnown RBP27.35■■□□□ 1.97
PPM1N-206ENST00000415077 MYT1LQ9UL68 1186 aa27.32■■□□□ 1.96
PPM1N-206ENST00000415077 RPRD2Q5VT52 1461 aaKnown RBP27.32■■□□□ 1.96
PPM1N-206ENST00000415077 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
PPM1N-206ENST00000415077 UNC13BO14795 1591 aa27.3■■□□□ 1.96
PPM1N-206ENST00000415077 INO80Q9ULG1 1556 aaPredicted RBP27.3■■□□□ 1.96
PPM1N-206ENST00000415077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.29■■□□□ 1.96
PPM1N-206ENST00000415077 FAM135AQ9P2D6 1515 aa27.29■■□□□ 1.96
PPM1N-206ENST00000415077 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
PPM1N-206ENST00000415077 GLI2P10070 1586 aa27.26■■□□□ 1.96
PPM1N-206ENST00000415077 NEO1Q92859 1461 aa27.26■■□□□ 1.95
PPM1N-206ENST00000415077 MAP3K4Q9Y6R4 1608 aa27.26■■□□□ 1.95
PPM1N-206ENST00000415077 L3MBTL2Q969R5 705 aa27.24■■□□□ 1.95
PPM1N-206ENST00000415077 POGZQ7Z3K3 1410 aa27.23■■□□□ 1.95
PPM1N-206ENST00000415077 FAM69CQ0P6D2 419 aa27.22■■□□□ 1.95
PPM1N-206ENST00000415077 MAGI2Q86UL8 1455 aa27.21■■□□□ 1.95
PPM1N-206ENST00000415077 IQGAP3Q86VI3 1631 aa27.21■■□□□ 1.95
PPM1N-206ENST00000415077 KIDINS220Q9ULH0 1771 aa27.18■■□□□ 1.94
PPM1N-206ENST00000415077 DIP2BQ9P265 1576 aa27.18■■□□□ 1.94
PPM1N-206ENST00000415077 DHX29Q7Z478 1369 aaKnown RBP27.18■■□□□ 1.94
PPM1N-206ENST00000415077 KDM5CP41229 1560 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms