RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 KIF3CO14782 793 aa12.13□□□□□ -0.47
PTPRK-209ENST00000415046 EMP3P54852 163 aa12.13□□□□□ -0.47
PTPRK-209ENST00000415046 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
PTPRK-209ENST00000415046 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
PTPRK-209ENST00000415046 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
PTPRK-209ENST00000415046 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-209ENST00000415046 C2orf72A6NCS6 295 aa12.09□□□□□ -0.47
PTPRK-209ENST00000415046 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
PTPRK-209ENST00000415046 RYDENQ9NUL5 291 aaKnown RBP12.07□□□□□ -0.48
PTPRK-209ENST00000415046 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
PTPRK-209ENST00000415046 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
PTPRK-209ENST00000415046 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
PTPRK-209ENST00000415046 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
PTPRK-209ENST00000415046 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
PTPRK-209ENST00000415046 GPR153Q6NV75 609 aa12.02□□□□□ -0.49
PTPRK-209ENST00000415046 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
PTPRK-209ENST00000415046 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-209ENST00000415046 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-209ENST00000415046 SLC34A2O95436 690 aa11.96□□□□□ -0.49
PTPRK-209ENST00000415046 ERBB3P21860 1342 aa11.95□□□□□ -0.5
PTPRK-209ENST00000415046 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
PTPRK-209ENST00000415046 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
PTPRK-209ENST00000415046 FOXK1P85037 733 aa11.93□□□□□ -0.5
PTPRK-209ENST00000415046 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
PTPRK-209ENST00000415046 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
PTPRK-209ENST00000415046 RTN4Q9NQC3 1192 aaKnown RBP11.92□□□□□ -0.5
PTPRK-209ENST00000415046 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
PTPRK-209ENST00000415046 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■□□□□ 10.2
PTPRK-209ENST00000415046 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
PTPRK-209ENST00000415046 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
PTPRK-209ENST00000415046 DSG2Q14126 1118 aa11.88□□□□□ -0.51
PTPRK-209ENST00000415046 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
PTPRK-209ENST00000415046 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-209ENST00000415046 NUDT7P0C024 238 aa11.85□□□□□ -0.51
PTPRK-209ENST00000415046 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
PTPRK-209ENST00000415046 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
PTPRK-209ENST00000415046 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.52
PTPRK-209ENST00000415046 ZNF687Q8N1G0 1237 aa11.83□□□□□ -0.52
PTPRK-209ENST00000415046 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-209ENST00000415046 PDE4AP27815 886 aa11.8□□□□□ -0.52
PTPRK-209ENST00000415046 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
PTPRK-209ENST00000415046 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
PTPRK-209ENST00000415046 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
PTPRK-209ENST00000415046 MMRN1Q13201 1228 aa11.77□□□□□ -0.53
PTPRK-209ENST00000415046 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
PTPRK-209ENST00000415046 MFSD10Q14728 455 aa11.74□□□□□ -0.53
PTPRK-209ENST00000415046 TBC1D12O60347 775 aa11.73□□□□□ -0.53
PTPRK-209ENST00000415046 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
PTPRK-209ENST00000415046 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
PTPRK-209ENST00000415046 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
PTPRK-209ENST00000415046 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-209ENST00000415046 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPRK-209ENST00000415046 PBX2P40425 430 aa11.69□□□□□ -0.54
PTPRK-209ENST00000415046 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-209ENST00000415046 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
PTPRK-209ENST00000415046 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
PTPRK-209ENST00000415046 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPRK-209ENST00000415046 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
PTPRK-209ENST00000415046 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
PTPRK-209ENST00000415046 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
PTPRK-209ENST00000415046 PTGER2P43116 358 aa11.6□□□□□ -0.55
PTPRK-209ENST00000415046 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
PTPRK-209ENST00000415046 ARHGAP33O14559 1287 aa11.58□□□□□ -0.56
PTPRK-209ENST00000415046 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-209ENST00000415046 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-209ENST00000415046 EVI5O60447 810 aa11.57□□□□□ -0.56
PTPRK-209ENST00000415046 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
PTPRK-209ENST00000415046 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
PTPRK-209ENST00000415046 MYT1LQ9UL68 1186 aa11.56□□□□□ -0.56
PTPRK-209ENST00000415046 MAP3K9P80192 1104 aa11.55□□□□□ -0.56
PTPRK-209ENST00000415046 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
PTPRK-209ENST00000415046 FOSBP53539 338 aa11.54□□□□□ -0.56
PTPRK-209ENST00000415046 RNF166Q96A37 237 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-209ENST00000415046 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
PTPRK-209ENST00000415046 PSEN2P49810 448 aa11.52□□□□□ -0.57
PTPRK-209ENST00000415046 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
PTPRK-209ENST00000415046 ADGRD1Q6QNK2 874 aa11.5□□□□□ -0.57
PTPRK-209ENST00000415046 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
PTPRK-209ENST00000415046 TK2O00142 265 aa11.49□□□□□ -0.57
PTPRK-209ENST00000415046 KCNK17Q96T54 332 aa11.49□□□□□ -0.57
PTPRK-209ENST00000415046 KCNH8Q96L42 1107 aa11.48□□□□□ -0.57
PTPRK-209ENST00000415046 DPYSL4O14531 572 aa11.46□□□□□ -0.57
PTPRK-209ENST00000415046 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
PTPRK-209ENST00000415046 HRO43593 1189 aa11.44□□□□□ -0.58
PTPRK-209ENST00000415046 PTPREP23469 700 aa11.43□□□□□ -0.58
PTPRK-209ENST00000415046 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
PTPRK-209ENST00000415046 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
PTPRK-209ENST00000415046 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
PTPRK-209ENST00000415046 PHF14O94880 888 aa11.4□□□□□ -0.58
PTPRK-209ENST00000415046 PDIA6Q15084 440 aa11.39□□□□□ -0.59
PTPRK-209ENST00000415046 E2F4Q16254 413 aa11.39□□□□□ -0.59
PTPRK-209ENST00000415046 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
PTPRK-209ENST00000415046 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
PTPRK-209ENST00000415046 VPS9D1Q9Y2B5 631 aa11.39□□□□□ -0.59
PTPRK-209ENST00000415046 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
PTPRK-209ENST00000415046 ZBED2Q9BTP6 218 aa11.37□□□□□ -0.59
PTPRK-209ENST00000415046 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-209ENST00000415046 EPAS1Q99814 870 aa11.36□□□□□ -0.59
PTPRK-209ENST00000415046 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
PTPRK-209ENST00000415046 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms