RNA–Protein interactions for RNA: ENST00000414785.5

PLOD3-202, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-202ENST00000414785 PLCH2O75038 1416 aa27.93■■■□□ 2.06
PLOD3-202ENST00000414785 FER1L4A9Z1Z3 1794 aa27.89■■■□□ 2.06
PLOD3-202ENST00000414785 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
PLOD3-202ENST00000414785 ARHGEF12Q9NZN5 1544 aa27.86■■■□□ 2.05
PLOD3-202ENST00000414785 ATP10AO60312 1499 aa27.84■■■□□ 2.05
PLOD3-202ENST00000414785 CERKQ8TCT0 537 aa27.84■■■□□ 2.05
PLOD3-202ENST00000414785 ATP1B4Q9UN42 357 aaPredicted RBP27.84■■■□□ 2.05
PLOD3-202ENST00000414785 CEBPAP49715 358 aaPredicted RBP27.82■■■□□ 2.04
PLOD3-202ENST00000414785 C9orf84Q5VXU9 1444 aa27.82■■■□□ 2.04
PLOD3-202ENST00000414785 KIF14Q15058 1648 aa27.81■■■□□ 2.04
PLOD3-202ENST00000414785 EFCAB2Q5VUJ9 269 aa27.8■■■□□ 2.04
PLOD3-202ENST00000414785 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
PLOD3-202ENST00000414785 ARHGAP35Q9NRY4 1499 aa27.77■■■□□ 2.04
PLOD3-202ENST00000414785 AFAP1Q8N556 730 aa27.75■■■□□ 2.03
PLOD3-202ENST00000414785 FMN1Q68DA7 1419 aa27.75■■■□□ 2.03
PLOD3-202ENST00000414785 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
PLOD3-202ENST00000414785 PREX1Q8TCU6 1659 aa27.73■■■□□ 2.03
PLOD3-202ENST00000414785 ZNF518AQ6AHZ1 1483 aa27.71■■■□□ 2.03
PLOD3-202ENST00000414785 ARHGAP5Q13017 1502 aa27.71■■■□□ 2.03
PLOD3-202ENST00000414785 KDM5CP41229 1560 aa27.7■■■□□ 2.03
PLOD3-202ENST00000414785 TROQ12816 1431 aaPredicted RBP27.7■■■□□ 2.03
PLOD3-202ENST00000414785 CDK11AQ9UQ88 783 aaPredicted RBP27.67■■■□□ 2.02
PLOD3-202ENST00000414785 STRCQ7RTU9 1775 aa27.66■■■□□ 2.02
PLOD3-202ENST00000414785 DIP2CQ9Y2E4 1556 aa27.66■■■□□ 2.02
PLOD3-202ENST00000414785 LRRIQ1Q96JM4 1722 aa27.66■■■□□ 2.02
PLOD3-202ENST00000414785 MYT1LQ9UL68 1186 aa27.63■■■□□ 2.01
PLOD3-202ENST00000414785 UHRF1BP1Q6BDS2 1440 aa27.62■■■□□ 2.01
PLOD3-202ENST00000414785 ABCA6Q8N139 1617 aa27.62■■■□□ 2.01
PLOD3-202ENST00000414785 CLIP1P30622 1438 aa27.6■■■□□ 2.01
PLOD3-202ENST00000414785 TRAPPC8Q9Y2L5 1435 aa27.59■■■□□ 2.01
PLOD3-202ENST00000414785 CDC42BPBQ9Y5S2 1711 aa27.58■■■□□ 2.01
PLOD3-202ENST00000414785 REREQ9P2R6 1566 aa27.58■■■□□ 2.01
PLOD3-202ENST00000414785 MLH3Q9UHC1 1453 aa27.57■■■□□ 2
PLOD3-202ENST00000414785 DMRT2Q9Y5R5 561 aa27.55■■■□□ 2
PLOD3-202ENST00000414785 C3P01024 1663 aa27.55■■■□□ 2
PLOD3-202ENST00000414785 ABCC1P33527 1531 aa27.54■■■□□ 2
PLOD3-202ENST00000414785 PREX2Q70Z35 1606 aa27.52■■■□□ 2
PLOD3-202ENST00000414785 ILDR2Q71H61 639 aa27.52■■■□□ 2
PLOD3-202ENST00000414785 AGLP35573 1532 aa27.51■■□□□ 1.99
PLOD3-202ENST00000414785 DISP3Q9P2K9 1392 aa27.48■■□□□ 1.99
PLOD3-202ENST00000414785 SETD1BQ9UPS6 1966 aaKnown RBP27.48■■□□□ 1.99
PLOD3-202ENST00000414785 ITSN2Q9NZM3 1697 aa27.48■■□□□ 1.99
PLOD3-202ENST00000414785 PTPRTO14522 1441 aa27.48■■□□□ 1.99
PLOD3-202ENST00000414785 KIDINS220Q9ULH0 1771 aa27.46■■□□□ 1.99
PLOD3-202ENST00000414785 CASKIN1Q8WXD9 1431 aa27.44■■□□□ 1.98
PLOD3-202ENST00000414785 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
PLOD3-202ENST00000414785 LTBP4Q8N2S1 1624 aa27.43■■□□□ 1.98
PLOD3-202ENST00000414785 ESF1Q9H501 851 aaKnown RBP27.43■■□□□ 1.98
PLOD3-202ENST00000414785 CCDC18Q5T9S5 1454 aa27.42■■□□□ 1.98
PLOD3-202ENST00000414785 CDC42BPAQ5VT25 1732 aa27.41■■□□□ 1.98
PLOD3-202ENST00000414785 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
PLOD3-202ENST00000414785 SAMD9LQ8IVG5 1584 aa27.38■■□□□ 1.97
PLOD3-202ENST00000414785 CNTLNQ9NXG0 1405 aa27.37■■□□□ 1.97
PLOD3-202ENST00000414785 ZNF777Q9ULD5 760 aaPredicted RBP27.36■■□□□ 1.97
PLOD3-202ENST00000414785 SYCP2Q9BX26 1530 aa27.34■■□□□ 1.97
PLOD3-202ENST00000414785 CAMSAP1Q5T5Y3 1602 aa27.32■■□□□ 1.96
PLOD3-202ENST00000414785 HNRNPMP52272 730 aaKnown RBP eCLIP27.32■■□□□ 1.96
PLOD3-202ENST00000414785 GPATCH8Q9UKJ3 1502 aaKnown RBP27.31■■□□□ 1.96
PLOD3-202ENST00000414785 SOCS7O14512 581 aa27.31■■□□□ 1.96
PLOD3-202ENST00000414785 ZMYM3Q14202 1370 aa27.31■■□□□ 1.96
PLOD3-202ENST00000414785 NPATQ14207 1427 aa27.3■■□□□ 1.96
PLOD3-202ENST00000414785 SPATA31D1Q6ZQQ2 1576 aa27.3■■□□□ 1.96
PLOD3-202ENST00000414785 SPAG9O60271 1321 aaKnown RBP27.29■■□□□ 1.96
PLOD3-202ENST00000414785 FYCO1Q9BQS8 1478 aa27.29■■□□□ 1.96
PLOD3-202ENST00000414785 MROH2AA6NES4 1674 aa27.28■■□□□ 1.96
PLOD3-202ENST00000414785 NCKAP5LQ9HCH0 1330 aa27.28■■□□□ 1.96
PLOD3-202ENST00000414785 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
PLOD3-202ENST00000414785 IQSEC2Q5JU85 1478 aa27.25■■□□□ 1.95
PLOD3-202ENST00000414785 ZNF335Q9H4Z2 1342 aaPredicted RBP27.24■■□□□ 1.95
PLOD3-202ENST00000414785 ATP7AQ04656 1500 aa27.24■■□□□ 1.95
PLOD3-202ENST00000414785 CLTCQ00610 1675 aaKnown RBP27.23■■□□□ 1.95
PLOD3-202ENST00000414785 PLXNC1O60486 1568 aa27.22■■□□□ 1.95
PLOD3-202ENST00000414785 INO80Q9ULG1 1556 aaPredicted RBP27.22■■□□□ 1.95
PLOD3-202ENST00000414785 A2MP01023 1474 aa27.19■■□□□ 1.94
PLOD3-202ENST00000414785 KIAA1107Q9UPP5 1409 aa27.19■■□□□ 1.94
PLOD3-202ENST00000414785 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
PLOD3-202ENST00000414785 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
PLOD3-202ENST00000414785 CFDP1Q9UEE9 299 aaPredicted RBP27.18■■□□□ 1.94
PLOD3-202ENST00000414785 GGT6Q6P531 493 aa27.17■■□□□ 1.94
PLOD3-202ENST00000414785 ZNF142P52746 1687 aaPredicted RBP27.15■■□□□ 1.94
PLOD3-202ENST00000414785 CEP170BQ9Y4F5 1589 aaPredicted RBP27.15■■□□□ 1.94
PLOD3-202ENST00000414785 TCOF1Q13428 1488 aaKnown RBP27.13■■□□□ 1.93
PLOD3-202ENST00000414785 CCNB3Q8WWL7 1395 aa27.13■■□□□ 1.93
PLOD3-202ENST00000414785 ZNF644Q9H582 1327 aaPredicted RBP27.13■■□□□ 1.93
PLOD3-202ENST00000414785 PLA2R1Q13018 1463 aa27.13■■□□□ 1.93
PLOD3-202ENST00000414785 PLEKHH2Q8IVE3 1493 aa27.13■■□□□ 1.93
PLOD3-202ENST00000414785 UBAP1LF5GYI3 381 aa27.12■■□□□ 1.93
PLOD3-202ENST00000414785 PKD2Q13563 968 aa27.1■■□□□ 1.93
PLOD3-202ENST00000414785 MTUS2Q5JR59 1369 aa27.07■■□□□ 1.92
PLOD3-202ENST00000414785 MBD5Q9P267 1494 aa27.06■■□□□ 1.92
PLOD3-202ENST00000414785 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
PLOD3-202ENST00000414785 ADGBQ8N7X0 1667 aa27.04■■□□□ 1.92
PLOD3-202ENST00000414785 PPP6R1Q9UPN7 881 aa27.03■■□□□ 1.92
PLOD3-202ENST00000414785 DNMT1P26358 1616 aaKnown RBP27.01■■□□□ 1.91
PLOD3-202ENST00000414785 A2ML1A8K2U0 1454 aa27■■□□□ 1.91
PLOD3-202ENST00000414785 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
PLOD3-202ENST00000414785 DHX29Q7Z478 1369 aaKnown RBP26.97■■□□□ 1.91
PLOD3-202ENST00000414785 RTEL1-TNFRSF6BF6WH68 1400 aa26.95■■□□□ 1.9
PLOD3-202ENST00000414785 NEURL4Q96JN8 1562 aa26.95■■□□□ 1.9
PLOD3-202ENST00000414785 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms