RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
LINC00342-201ENST00000412393 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
LINC00342-201ENST00000412393 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
LINC00342-201ENST00000412393 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
LINC00342-201ENST00000412393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-201ENST00000412393 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-201ENST00000412393 NLRP6P59044 892 aa11.62□□□□□ -0.55
LINC00342-201ENST00000412393 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
LINC00342-201ENST00000412393 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-201ENST00000412393 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
LINC00342-201ENST00000412393 ARSIQ5FYB1 569 aa11.58□□□□□ -0.56
LINC00342-201ENST00000412393 PBX2P40425 430 aa11.57□□□□□ -0.56
LINC00342-201ENST00000412393 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00342-201ENST00000412393 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
LINC00342-201ENST00000412393 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
LINC00342-201ENST00000412393 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
LINC00342-201ENST00000412393 KIF3CO14782 793 aa11.49□□□□□ -0.57
LINC00342-201ENST00000412393 SLC34A2O95436 690 aa11.49□□□□□ -0.57
LINC00342-201ENST00000412393 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
LINC00342-201ENST00000412393 PSDA5PKW4 1024 aaPredicted RBP11.44□□□□□ -0.58
LINC00342-201ENST00000412393 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
LINC00342-201ENST00000412393 C2orf72A6NCS6 295 aa11.43□□□□□ -0.58
LINC00342-201ENST00000412393 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00342-201ENST00000412393 MFRPQ9BY79 579 aa11.43□□□□□ -0.58
LINC00342-201ENST00000412393 NUDT7P0C024 238 aa11.41□□□□□ -0.58
LINC00342-201ENST00000412393 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
LINC00342-201ENST00000412393 STK25O00506 426 aa11.39□□□□□ -0.59
LINC00342-201ENST00000412393 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
LINC00342-201ENST00000412393 PCDHGA4Q9Y5G9 962 aa11.39□□□□□ -0.59
LINC00342-201ENST00000412393 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
LINC00342-201ENST00000412393 ABCC9O60706 1549 aa11.35□□□□□ -0.59
LINC00342-201ENST00000412393 ARHGAP33O14559 1287 aa11.34□□□□□ -0.59
LINC00342-201ENST00000412393 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
LINC00342-201ENST00000412393 TK2O00142 265 aa11.32□□□□□ -0.6
LINC00342-201ENST00000412393 ADGRD1Q6QNK2 874 aa11.32□□□□□ -0.6
LINC00342-201ENST00000412393 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
LINC00342-201ENST00000412393 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
LINC00342-201ENST00000412393 ECM2O94769 699 aaPredicted RBP11.28□□□□□ -0.6
LINC00342-201ENST00000412393 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
LINC00342-201ENST00000412393 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
LINC00342-201ENST00000412393 HRO43593 1189 aa11.21□□□□□ -0.61
LINC00342-201ENST00000412393 TBC1D12O60347 775 aa11.21□□□□□ -0.61
LINC00342-201ENST00000412393 FOXK1P85037 733 aa11.21□□□□□ -0.61
LINC00342-201ENST00000412393 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
LINC00342-201ENST00000412393 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
LINC00342-201ENST00000412393 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
LINC00342-201ENST00000412393 GPHNQ9NQX3 736 aaPredicted RBP11.16□□□□□ -0.62
LINC00342-201ENST00000412393 RGL2O15211 777 aa11.14□□□□□ -0.63
LINC00342-201ENST00000412393 RGS20O76081 388 aa11.14□□□□□ -0.63
LINC00342-201ENST00000412393 PLPP6Q8IY26 295 aa11.14□□□□□ -0.63
LINC00342-201ENST00000412393 PPP1R37O75864 691 aa11.13□□□□□ -0.63
LINC00342-201ENST00000412393 PSEN2P49810 448 aa11.12□□□□□ -0.63
LINC00342-201ENST00000412393 PKD2Q13563 968 aa11.12□□□□□ -0.63
LINC00342-201ENST00000412393 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
LINC00342-201ENST00000412393 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
LINC00342-201ENST00000412393 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
LINC00342-201ENST00000412393 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
LINC00342-201ENST00000412393 KCNK17Q96T54 332 aa11.06□□□□□ -0.64
LINC00342-201ENST00000412393 DSG2Q14126 1118 aa11.05□□□□□ -0.64
LINC00342-201ENST00000412393 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
LINC00342-201ENST00000412393 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
LINC00342-201ENST00000412393 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
LINC00342-201ENST00000412393 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
LINC00342-201ENST00000412393 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
LINC00342-201ENST00000412393 ZNF454Q8N9F8 522 aa10.97□□□□□ -0.65
LINC00342-201ENST00000412393 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
LINC00342-201ENST00000412393 PTPREP23469 700 aa10.96□□□□□ -0.65
LINC00342-201ENST00000412393 PTPN5P54829 565 aa10.96□□□□□ -0.65
LINC00342-201ENST00000412393 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
LINC00342-201ENST00000412393 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
LINC00342-201ENST00000412393 GOLGA8CPA6NN73 597 aa10.94□□□□□ -0.66
LINC00342-201ENST00000412393 FOSBP53539 338 aa10.94□□□□□ -0.66
LINC00342-201ENST00000412393 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
LINC00342-201ENST00000412393 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
LINC00342-201ENST00000412393 MRPL50Q8N5N7 158 aaKnown RBP10.92□□□□□ -0.66
LINC00342-201ENST00000412393 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
LINC00342-201ENST00000412393 A0A0G2JS52 829 aa10.91□□□□□ -0.66
LINC00342-201ENST00000412393 JPH4Q96JJ6 628 aa10.91□□□□□ -0.66
LINC00342-201ENST00000412393 ZBED2Q9BTP6 218 aa10.91□□□□□ -0.66
LINC00342-201ENST00000412393 IRX2Q9BZI1 471 aaPredicted RBP10.91□□□□□ -0.66
LINC00342-201ENST00000412393 WNT2BQ93097 391 aa10.9□□□□□ -0.66
LINC00342-201ENST00000412393 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
LINC00342-201ENST00000412393 UPF1Q92900 1129 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC00342-201ENST00000412393 PDE4AP27815 886 aa10.87□□□□□ -0.67
LINC00342-201ENST00000412393 ZDHHC16Q969W1 377 aa10.87□□□□□ -0.67
LINC00342-201ENST00000412393 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
LINC00342-201ENST00000412393 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
LINC00342-201ENST00000412393 EVI5O60447 810 aa10.82□□□□□ -0.68
LINC00342-201ENST00000412393 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
LINC00342-201ENST00000412393 NACADO15069 1562 aa10.82□□□□□ -0.68
LINC00342-201ENST00000412393 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
LINC00342-201ENST00000412393 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
LINC00342-201ENST00000412393 PPP1R3GB7ZBB8 358 aa10.79□□□□□ -0.68
LINC00342-201ENST00000412393 ANKK1Q8NFD2 765 aa10.79□□□□□ -0.68
LINC00342-201ENST00000412393 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
LINC00342-201ENST00000412393 LAPTM4BQ86VI4 370 aa10.78□□□□□ -0.68
LINC00342-201ENST00000412393 DCAF8L2P0C7V8 631 aa10.77□□□□□ -0.69
LINC00342-201ENST00000412393 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
LINC00342-201ENST00000412393 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
LINC00342-201ENST00000412393 FBXW7Q969H0 707 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms