RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 RNF25Q96BH1 459 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P2-201ENST00000411913 MS4A4AQ96JQ5 239 aa8.94□□□□□ -0.98
HMGB3P2-201ENST00000411913 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
HMGB3P2-201ENST00000411913 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
HMGB3P2-201ENST00000411913 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
HMGB3P2-201ENST00000411913 NLRP6P59044 892 aa8.9□□□□□ -0.98
HMGB3P2-201ENST00000411913 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
HMGB3P2-201ENST00000411913 TAOK2Q9UL54 1235 aa8.9□□□□□ -0.98
HMGB3P2-201ENST00000411913 ANKRD13DQ6ZTN6 518 aa8.87□□□□□ -0.99
HMGB3P2-201ENST00000411913 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P2-201ENST00000411913 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
HMGB3P2-201ENST00000411913 PTGER2P43116 358 aa8.85□□□□□ -0.99
HMGB3P2-201ENST00000411913 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
HMGB3P2-201ENST00000411913 KHSRPQ92945 711 aaKnown RBP eCLIP8.84□□□□□ -0.99
HMGB3P2-201ENST00000411913 FBXO22Q8NEZ5 403 aa8.82□□□□□ -1
HMGB3P2-201ENST00000411913 STK25O00506 426 aa8.8□□□□□ -1
HMGB3P2-201ENST00000411913 MFRPQ9BY79 579 aa8.79□□□□□ -1
HMGB3P2-201ENST00000411913 C2orf72A6NCS6 295 aa8.78□□□□□ -1
HMGB3P2-201ENST00000411913 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -1
HMGB3P2-201ENST00000411913 NUDT7P0C024 238 aa8.76□□□□□ -1.01
HMGB3P2-201ENST00000411913 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P2-201ENST00000411913 KIF3CO14782 793 aa8.74□□□□□ -1.01
HMGB3P2-201ENST00000411913 PBX2P40425 430 aa8.74□□□□□ -1.01
HMGB3P2-201ENST00000411913 TMC2Q8TDI7 906 aa8.74□□□□□ -1.01
HMGB3P2-201ENST00000411913 LHX6Q9UPM6 363 aa8.72□□□□□ -1.01
HMGB3P2-201ENST00000411913 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
HMGB3P2-201ENST00000411913 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
HMGB3P2-201ENST00000411913 SLC34A2O95436 690 aa8.7□□□□□ -1.02
HMGB3P2-201ENST00000411913 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
HMGB3P2-201ENST00000411913 RGL2O15211 777 aa8.65□□□□□ -1.02
HMGB3P2-201ENST00000411913 PSDA5PKW4 1024 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P2-201ENST00000411913 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
HMGB3P2-201ENST00000411913 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
HMGB3P2-201ENST00000411913 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
HMGB3P2-201ENST00000411913 PPP1R37O75864 691 aa8.62□□□□□ -1.03
HMGB3P2-201ENST00000411913 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
HMGB3P2-201ENST00000411913 PKD2Q13563 968 aa8.61□□□□□ -1.03
HMGB3P2-201ENST00000411913 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
HMGB3P2-201ENST00000411913 TBC1D12O60347 775 aa8.57□□□□□ -1.04
HMGB3P2-201ENST00000411913 PLPP6Q8IY26 295 aa8.57□□□□□ -1.04
HMGB3P2-201ENST00000411913 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
HMGB3P2-201ENST00000411913 TK2O00142 265 aa8.56□□□□□ -1.04
HMGB3P2-201ENST00000411913 PSEN2P49810 448 aa8.56□□□□□ -1.04
HMGB3P2-201ENST00000411913 PPP4R3BQ5MIZ7 849 aa8.56□□□□□ -1.04
HMGB3P2-201ENST00000411913 FOXK1P85037 733 aa8.55□□□□□ -1.04
HMGB3P2-201ENST00000411913 DMRTA1Q5VZB9 504 aa8.55□□□□□ -1.04
HMGB3P2-201ENST00000411913 KDM4FA0A1W2PPD8 638 aa8.54□□□□□ -1.04
HMGB3P2-201ENST00000411913 KCNH8Q96L42 1107 aa8.54□□□□□ -1.04
HMGB3P2-201ENST00000411913 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
HMGB3P2-201ENST00000411913 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
HMGB3P2-201ENST00000411913 HRO43593 1189 aa8.51□□□□□ -1.05
HMGB3P2-201ENST00000411913 DSG2Q14126 1118 aa8.51□□□□□ -1.05
HMGB3P2-201ENST00000411913 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
HMGB3P2-201ENST00000411913 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
HMGB3P2-201ENST00000411913 PTPN5P54829 565 aa8.45□□□□□ -1.06
HMGB3P2-201ENST00000411913 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
HMGB3P2-201ENST00000411913 CHGAP10645 457 aaKnown RBP8.44□□□□□ -1.06
HMGB3P2-201ENST00000411913 ZNF454Q8N9F8 522 aa8.44□□□□□ -1.06
HMGB3P2-201ENST00000411913 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
HMGB3P2-201ENST00000411913 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
HMGB3P2-201ENST00000411913 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
HMGB3P2-201ENST00000411913 RYDENQ9NUL5 291 aaKnown RBP8.4□□□□□ -1.06
HMGB3P2-201ENST00000411913 BCL2L12Q9HB09 334 aa8.39□□□□□ -1.07
HMGB3P2-201ENST00000411913 PTPREP23469 700 aa8.38□□□□□ -1.07
HMGB3P2-201ENST00000411913 PPP1R15BQ5SWA1 713 aa8.38□□□□□ -1.07
HMGB3P2-201ENST00000411913 SLC4A5Q9BY07 1137 aa8.37□□□□□ -1.07
HMGB3P2-201ENST00000411913 MRPL50Q8N5N7 158 aaKnown RBP8.36□□□□□ -1.07
HMGB3P2-201ENST00000411913 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
HMGB3P2-201ENST00000411913 FOSBP53539 338 aa8.35□□□□□ -1.07
HMGB3P2-201ENST00000411913 NKX1-1Q15270 411 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P2-201ENST00000411913 THSD4Q6ZMP0 1018 aa8.35□□□□□ -1.07
HMGB3P2-201ENST00000411913 WNT2BQ93097 391 aa8.35□□□□□ -1.07
HMGB3P2-201ENST00000411913 PDE4AP27815 886 aa8.34□□□□□ -1.07
HMGB3P2-201ENST00000411913 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P2-201ENST00000411913 EVI5O60447 810 aa8.32□□□□□ -1.08
HMGB3P2-201ENST00000411913 RGS20O76081 388 aa8.32□□□□□ -1.08
HMGB3P2-201ENST00000411913 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
HMGB3P2-201ENST00000411913 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
HMGB3P2-201ENST00000411913 NBPF3Q9H094 633 aa8.32□□□□□ -1.08
HMGB3P2-201ENST00000411913 JPH4Q96JJ6 628 aa8.31□□□□□ -1.08
HMGB3P2-201ENST00000411913 DNAJC5Q9H3Z4 198 aa8.31□□□□□ -1.08
HMGB3P2-201ENST00000411913 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P2-201ENST00000411913 IFFO2Q5TF58 517 aa8.3□□□□□ -1.08
HMGB3P2-201ENST00000411913 ADAM33Q9BZ11 813 aa8.3□□□□□ -1.08
HMGB3P2-201ENST00000411913 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
HMGB3P2-201ENST00000411913 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
HMGB3P2-201ENST00000411913 LARP6Q9BRS8 491 aaKnown RBP8.29□□□□□ -1.08
HMGB3P2-201ENST00000411913 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P2-201ENST00000411913 A0A0G2JS52 829 aa8.27□□□□□ -1.09
HMGB3P2-201ENST00000411913 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
HMGB3P2-201ENST00000411913 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
HMGB3P2-201ENST00000411913 PPP1R3GB7ZBB8 358 aa8.23□□□□□ -1.09
HMGB3P2-201ENST00000411913 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
HMGB3P2-201ENST00000411913 GTPBP6O43824 516 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P2-201ENST00000411913 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
HMGB3P2-201ENST00000411913 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
HMGB3P2-201ENST00000411913 TYW1BQ6NUM6 668 aa8.19□□□□□ -1.1
HMGB3P2-201ENST00000411913 FBXW7Q969H0 707 aa8.19□□□□□ -1.1
HMGB3P2-201ENST00000411913 EMILIN3Q9NT22 766 aa8.19□□□□□ -1.1
HMGB3P2-201ENST00000411913 COL9A1P20849 921 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms