RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 ARAP1Q96P48 1450 aa10.19□□□□□ -0.78
RAB28P1-201ENST00000411517 ST18O60284 1047 aa10.19□□□□□ -0.78
RAB28P1-201ENST00000411517 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
RAB28P1-201ENST00000411517 CABP2Q9NPB3 220 aa10.17□□□□□ -0.78
RAB28P1-201ENST00000411517 SPNS2Q8IVW8 549 aa10.16□□□□□ -0.78
RAB28P1-201ENST00000411517 L3MBTL3Q96JM7 780 aaPredicted RBP10.16□□□□□ -0.78
RAB28P1-201ENST00000411517 SNPHO15079 494 aa10.14□□□□□ -0.79
RAB28P1-201ENST00000411517 G3V3G9 751 aa10.12□□□□□ -0.79
RAB28P1-201ENST00000411517 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
RAB28P1-201ENST00000411517 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
RAB28P1-201ENST00000411517 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
RAB28P1-201ENST00000411517 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
RAB28P1-201ENST00000411517 RSF1Q96T23 1441 aaPredicted RBP10.06□□□□□ -0.8
RAB28P1-201ENST00000411517 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
RAB28P1-201ENST00000411517 CEP164Q9UPV0 1460 aa10.03□□□□□ -0.8
RAB28P1-201ENST00000411517 CADPSQ9ULU8 1353 aa10.02□□□□□ -0.8
RAB28P1-201ENST00000411517 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.81
RAB28P1-201ENST00000411517 LMTK3Q96Q04 1460 aa10.02□□□□□ -0.81
RAB28P1-201ENST00000411517 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
RAB28P1-201ENST00000411517 EMP3P54852 163 aa10□□□□□ -0.81
RAB28P1-201ENST00000411517 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
RAB28P1-201ENST00000411517 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
RAB28P1-201ENST00000411517 FBXO41Q8TF61 875 aa9.98□□□□□ -0.81
RAB28P1-201ENST00000411517 SOCS7O14512 581 aa9.97□□□□□ -0.81
RAB28P1-201ENST00000411517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
RAB28P1-201ENST00000411517 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
RAB28P1-201ENST00000411517 PEG3Q9GZU2 1588 aa9.95□□□□□ -0.82
RAB28P1-201ENST00000411517 CHD1O14646 1710 aa9.95□□□□□ -0.82
RAB28P1-201ENST00000411517 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
RAB28P1-201ENST00000411517 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
RAB28P1-201ENST00000411517 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
RAB28P1-201ENST00000411517 FANCD2Q9BXW9 1451 aa9.92□□□□□ -0.82
RAB28P1-201ENST00000411517 VGFO15240 615 aaPredicted RBP9.92□□□□□ -0.82
RAB28P1-201ENST00000411517 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
RAB28P1-201ENST00000411517 HS3ST6Q96QI5 342 aa9.9□□□□□ -0.82
RAB28P1-201ENST00000411517 ZNF608Q9ULD9 1512 aaPredicted RBP9.9□□□□□ -0.82
RAB28P1-201ENST00000411517 URB2Q14146 1524 aaKnown RBP9.89□□□□□ -0.83
RAB28P1-201ENST00000411517 PHF8Q9UPP1 1060 aa9.89□□□□□ -0.83
RAB28P1-201ENST00000411517 SOX12O15370 315 aa9.88□□□□□ -0.83
RAB28P1-201ENST00000411517 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
RAB28P1-201ENST00000411517 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
RAB28P1-201ENST00000411517 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
RAB28P1-201ENST00000411517 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
RAB28P1-201ENST00000411517 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
RAB28P1-201ENST00000411517 EIF4G3O43432 1585 aaKnown RBP9.85□□□□□ -0.83
RAB28P1-201ENST00000411517 POTEB3A0JP26 581 aa9.85□□□□□ -0.83
RAB28P1-201ENST00000411517 POTEBQ6S5H4 581 aa9.85□□□□□ -0.83
RAB28P1-201ENST00000411517 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
RAB28P1-201ENST00000411517 MS4A4AQ96JQ5 239 aa9.84□□□□□ -0.83
RAB28P1-201ENST00000411517 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
RAB28P1-201ENST00000411517 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
RAB28P1-201ENST00000411517 BCL11BQ9C0K0 894 aaPredicted RBP9.84□□□□□ -0.83
RAB28P1-201ENST00000411517 STK24Q9Y6E0 443 aa9.84□□□□□ -0.83
RAB28P1-201ENST00000411517 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
RAB28P1-201ENST00000411517 ERBB3P21860 1342 aa9.82□□□□□ -0.84
RAB28P1-201ENST00000411517 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
RAB28P1-201ENST00000411517 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
RAB28P1-201ENST00000411517 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
RAB28P1-201ENST00000411517 ILDR2Q71H61 639 aa9.81□□□□□ -0.84
RAB28P1-201ENST00000411517 KIF13AQ9H1H9 1805 aa9.81□□□□□ -0.84
RAB28P1-201ENST00000411517 CLASP1Q7Z460 1538 aa9.81□□□□□ -0.84
RAB28P1-201ENST00000411517 STK25O00506 426 aa9.79□□□□□ -0.84
RAB28P1-201ENST00000411517 NLRP6P59044 892 aa9.79□□□□□ -0.84
RAB28P1-201ENST00000411517 GAPVD1Q14C86 1478 aa9.76□□□□□ -0.85
RAB28P1-201ENST00000411517 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
RAB28P1-201ENST00000411517 DISP3Q9P2K9 1392 aa9.74□□□□□ -0.85
RAB28P1-201ENST00000411517 CFTRP13569 1480 aa9.73□□□□□ -0.85
RAB28P1-201ENST00000411517 SYNJ1O43426 1573 aa9.73□□□□□ -0.85
RAB28P1-201ENST00000411517 FBXO22Q8NEZ5 403 aa9.73□□□□□ -0.85
RAB28P1-201ENST00000411517 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
RAB28P1-201ENST00000411517 KDM6BO15054 1643 aa9.72□□□□□ -0.85
RAB28P1-201ENST00000411517 MFRPQ9BY79 579 aa9.72□□□□□ -0.85
RAB28P1-201ENST00000411517 ADGRL1O94910 1474 aa9.71□□□□□ -0.86
RAB28P1-201ENST00000411517 RGL2O15211 777 aa9.7□□□□□ -0.86
RAB28P1-201ENST00000411517 ZSWIM6Q9HCJ5 1215 aa9.7□□□□□ -0.86
RAB28P1-201ENST00000411517 PKD2Q13563 968 aa9.68□□□□□ -0.86
RAB28P1-201ENST00000411517 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
RAB28P1-201ENST00000411517 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
RAB28P1-201ENST00000411517 AQRO60306 1485 aaKnown RBP eCLIP9.67□□□□□ -0.86
RAB28P1-201ENST00000411517 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.86
RAB28P1-201ENST00000411517 MROH2BQ7Z745 1585 aa9.65□□□□□ -0.86
RAB28P1-201ENST00000411517 PRDM2Q13029 1718 aa9.64□□□□□ -0.87
RAB28P1-201ENST00000411517 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
RAB28P1-201ENST00000411517 C2orf72A6NCS6 295 aa9.63□□□□□ -0.87
RAB28P1-201ENST00000411517 ZNF687Q8N1G0 1237 aa9.63□□□□□ -0.87
RAB28P1-201ENST00000411517 TARBP1Q13395 1621 aaKnown RBP9.63□□□□□ -0.87
RAB28P1-201ENST00000411517 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
RAB28P1-201ENST00000411517 ABCC10Q5T3U5 1492 aa9.6□□□□□ -0.87
RAB28P1-201ENST00000411517 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
RAB28P1-201ENST00000411517 TMC2Q8TDI7 906 aa9.6□□□□□ -0.87
RAB28P1-201ENST00000411517 RNF166Q96A37 237 aaPredicted RBP9.59□□□□□ -0.87
RAB28P1-201ENST00000411517 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
RAB28P1-201ENST00000411517 ABCC8Q09428 1581 aa9.58□□□□□ -0.88
RAB28P1-201ENST00000411517 NUDT7P0C024 238 aa9.58□□□□□ -0.88
RAB28P1-201ENST00000411517 FAM69CQ0P6D2 419 aa9.58□□□□□ -0.88
RAB28P1-201ENST00000411517 KIF3CO14782 793 aa9.57□□□□□ -0.88
RAB28P1-201ENST00000411517 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
RAB28P1-201ENST00000411517 CHMP7Q8WUX9 453 aaPredicted RBP9.57□□□□□ -0.88
RAB28P1-201ENST00000411517 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
RAB28P1-201ENST00000411517 MAGI1Q96QZ7 1491 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms