RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
PSMD1-203ENST00000409643 MPHOSPH9Q99550 1183 aa15.71■□□□□ 0.11
PSMD1-203ENST00000409643 ANP32CO43423 234 aa15.71■□□□□ 0.1
PSMD1-203ENST00000409643 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
PSMD1-203ENST00000409643 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
PSMD1-203ENST00000409643 ADGRL2O95490 1459 aa15.67■□□□□ 0.1
PSMD1-203ENST00000409643 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
PSMD1-203ENST00000409643 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
PSMD1-203ENST00000409643 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
PSMD1-203ENST00000409643 GPATCH8Q9UKJ3 1502 aaKnown RBP15.66■□□□□ 0.1
PSMD1-203ENST00000409643 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
PSMD1-203ENST00000409643 RPRD2Q5VT52 1461 aaKnown RBP15.66■□□□□ 0.1
PSMD1-203ENST00000409643 ABCA8O94911 1581 aa15.66■□□□□ 0.1
PSMD1-203ENST00000409643 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
PSMD1-203ENST00000409643 ANKRD30BQ9BXX2 1392 aa15.65■□□□□ 0.1
PSMD1-203ENST00000409643 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
PSMD1-203ENST00000409643 KIF14Q15058 1648 aa15.63■□□□□ 0.09
PSMD1-203ENST00000409643 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
PSMD1-203ENST00000409643 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
PSMD1-203ENST00000409643 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
PSMD1-203ENST00000409643 EIF4G2P78344 907 aaKnown RBP eCLIP15.61■□□□□ 0.09
PSMD1-203ENST00000409643 KCNH8Q96L42 1107 aa15.61■□□□□ 0.09
PSMD1-203ENST00000409643 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
PSMD1-203ENST00000409643 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
PSMD1-203ENST00000409643 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
PSMD1-203ENST00000409643 FBLN2P98095 1184 aa15.59■□□□□ 0.09
PSMD1-203ENST00000409643 ANKRD30AQ9BXX3 1397 aa15.59■□□□□ 0.09
PSMD1-203ENST00000409643 CDC42BPAQ5VT25 1732 aa15.58■□□□□ 0.08
PSMD1-203ENST00000409643 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
PSMD1-203ENST00000409643 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
PSMD1-203ENST00000409643 PZPP20742 1482 aa15.58■□□□□ 0.08
PSMD1-203ENST00000409643 PLEKHD1A6NEE1 506 aa15.57■□□□□ 0.08
PSMD1-203ENST00000409643 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
PSMD1-203ENST00000409643 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
PSMD1-203ENST00000409643 ATP10BO94823 1461 aa15.56■□□□□ 0.08
PSMD1-203ENST00000409643 POLR1AO95602 1720 aaPredicted RBP15.55■□□□□ 0.08
PSMD1-203ENST00000409643 KIAA1107Q9UPP5 1409 aa15.54■□□□□ 0.08
PSMD1-203ENST00000409643 WASHC2AQ641Q2 1341 aa15.53■□□□□ 0.08
PSMD1-203ENST00000409643 CNTLNQ9NXG0 1405 aa15.53■□□□□ 0.08
PSMD1-203ENST00000409643 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
PSMD1-203ENST00000409643 ANKRD50Q9ULJ7 1429 aa15.52■□□□□ 0.07
PSMD1-203ENST00000409643 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
PSMD1-203ENST00000409643 FOXD1Q16676 465 aa15.5■□□□□ 0.07
PSMD1-203ENST00000409643 C9orf84Q5VXU9 1444 aa15.5■□□□□ 0.07
PSMD1-203ENST00000409643 MBD5Q9P267 1494 aa15.5■□□□□ 0.07
PSMD1-203ENST00000409643 PTPRGP23470 1445 aa15.49■□□□□ 0.07
PSMD1-203ENST00000409643 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
PSMD1-203ENST00000409643 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
PSMD1-203ENST00000409643 SPATA31E1Q6ZUB1 1445 aa15.48■□□□□ 0.07
PSMD1-203ENST00000409643 SHROOM2Q13796 1616 aa15.47■□□□□ 0.07
PSMD1-203ENST00000409643 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
PSMD1-203ENST00000409643 RSPH4AQ5TD94 716 aa15.46■□□□□ 0.07
PSMD1-203ENST00000409643 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.06
PSMD1-203ENST00000409643 TSPY4P0CV99 314 aa15.45■□□□□ 0.06
PSMD1-203ENST00000409643 TSPY10P0CW01 314 aa15.45■□□□□ 0.06
PSMD1-203ENST00000409643 CHD1O14646 1710 aa15.45■□□□□ 0.06
PSMD1-203ENST00000409643 ARHGEF12Q9NZN5 1544 aa15.44■□□□□ 0.06
PSMD1-203ENST00000409643 NEFLP07196 543 aa15.44■□□□□ 0.06
PSMD1-203ENST00000409643 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
PSMD1-203ENST00000409643 PKD2Q13563 968 aa15.43■□□□□ 0.06
PSMD1-203ENST00000409643 UHRF1BP1Q6BDS2 1440 aa15.43■□□□□ 0.06
PSMD1-203ENST00000409643 CDC42BPBQ9Y5S2 1711 aa15.42■□□□□ 0.06
PSMD1-203ENST00000409643 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
PSMD1-203ENST00000409643 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
PSMD1-203ENST00000409643 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
PSMD1-203ENST00000409643 NUP155O75694 1391 aa15.4■□□□□ 0.06
PSMD1-203ENST00000409643 KIF15Q9NS87 1388 aa15.4■□□□□ 0.06
PSMD1-203ENST00000409643 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
PSMD1-203ENST00000409643 PLEKHH2Q8IVE3 1493 aa15.38■□□□□ 0.05
PSMD1-203ENST00000409643 FKBP8Q14318 412 aa15.38■□□□□ 0.05
PSMD1-203ENST00000409643 PRKRIP1Q9H875 184 aaPredicted RBP15.38■□□□□ 0.05
PSMD1-203ENST00000409643 KIF7Q2M1P5 1343 aa15.38■□□□□ 0.05
PSMD1-203ENST00000409643 ABCC2Q92887 1545 aa15.37■□□□□ 0.05
PSMD1-203ENST00000409643 KDM5CP41229 1560 aa15.37■□□□□ 0.05
PSMD1-203ENST00000409643 C11orf95C9JLR9 678 aaPredicted RBP15.37■□□□□ 0.05
PSMD1-203ENST00000409643 USP47Q96K76 1375 aa15.36■□□□□ 0.05
PSMD1-203ENST00000409643 HNRNPUQ00839 825 aaKnown RBP eCLIP15.35■□□□□ 0.05
PSMD1-203ENST00000409643 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
PSMD1-203ENST00000409643 UNC13BO14795 1591 aa15.34■□□□□ 0.05
PSMD1-203ENST00000409643 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
PSMD1-203ENST00000409643 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
PSMD1-203ENST00000409643 MYT1Q01538 1121 aa15.34■□□□□ 0.05
PSMD1-203ENST00000409643 HNRNPMP52272 730 aaKnown RBP eCLIP15.33■□□□□ 0.05
PSMD1-203ENST00000409643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.33■□□□□ 0.04
PSMD1-203ENST00000409643 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
PSMD1-203ENST00000409643 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.04
PSMD1-203ENST00000409643 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.04
PSMD1-203ENST00000409643 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
PSMD1-203ENST00000409643 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
PSMD1-203ENST00000409643 UHRF1BP1LA0JNW5 1464 aa15.3■□□□□ 0.04
PSMD1-203ENST00000409643 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
PSMD1-203ENST00000409643 MRS2Q9HD23 443 aa15.28■□□□□ 0.04
PSMD1-203ENST00000409643 TSHZ2Q9NRE2 1034 aa15.28■□□□□ 0.04
PSMD1-203ENST00000409643 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.04
PSMD1-203ENST00000409643 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.03
PSMD1-203ENST00000409643 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
PSMD1-203ENST00000409643 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.03
PSMD1-203ENST00000409643 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
PSMD1-203ENST00000409643 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
PSMD1-203ENST00000409643 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms