RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ATP10BO94823 1461 aa21.59■■□□□ 1.05
LIMS2-205ENST00000409455 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
LIMS2-205ENST00000409455 TROQ12816 1431 aaPredicted RBP21.58■■□□□ 1.04
LIMS2-205ENST00000409455 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
LIMS2-205ENST00000409455 MSH5O43196 834 aa21.56■■□□□ 1.04
LIMS2-205ENST00000409455 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
LIMS2-205ENST00000409455 PTPRKQ15262 1439 aa21.55■■□□□ 1.04
LIMS2-205ENST00000409455 UACAQ9BZF9 1416 aa21.54■■□□□ 1.04
LIMS2-205ENST00000409455 PTPN23Q9H3S7 1636 aa21.54■■□□□ 1.04
LIMS2-205ENST00000409455 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
LIMS2-205ENST00000409455 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.03
LIMS2-205ENST00000409455 TCOF1Q13428 1488 aaKnown RBP21.51■■□□□ 1.03
LIMS2-205ENST00000409455 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-205ENST00000409455 ZNF644Q9H582 1327 aaPredicted RBP21.48■■□□□ 1.03
LIMS2-205ENST00000409455 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
LIMS2-205ENST00000409455 KIF14Q15058 1648 aa21.46■■□□□ 1.03
LIMS2-205ENST00000409455 CFDP1Q9UEE9 299 aaPredicted RBP21.45■■□□□ 1.02
LIMS2-205ENST00000409455 CHIC2Q9UKJ5 165 aa21.45■■□□□ 1.02
LIMS2-205ENST00000409455 GPATCH8Q9UKJ3 1502 aaKnown RBP21.44■■□□□ 1.02
LIMS2-205ENST00000409455 ABCC2Q92887 1545 aa21.42■■□□□ 1.02
LIMS2-205ENST00000409455 HFM1A2PYH4 1435 aa21.41■■□□□ 1.02
LIMS2-205ENST00000409455 ADCY10Q96PN6 1610 aa21.41■■□□□ 1.02
LIMS2-205ENST00000409455 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.02
LIMS2-205ENST00000409455 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.02
LIMS2-205ENST00000409455 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.02
LIMS2-205ENST00000409455 NAIPQ13075 1403 aa21.38■■□□□ 1.01
LIMS2-205ENST00000409455 TONSLQ96HA7 1378 aa21.38■■□□□ 1.01
LIMS2-205ENST00000409455 HNRNPUQ00839 825 aaKnown RBP eCLIP21.37■■□□□ 1.01
LIMS2-205ENST00000409455 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
LIMS2-205ENST00000409455 ERICH6BQ5W0A0 696 aa21.34■■□□□ 1.01
LIMS2-205ENST00000409455 ABCC5O15440 1437 aa21.34■■□□□ 1.01
LIMS2-205ENST00000409455 DAPK1P53355 1430 aa21.34■■□□□ 1.01
LIMS2-205ENST00000409455 UHRF1BP1LA0JNW5 1464 aa21.34■■□□□ 1.01
LIMS2-205ENST00000409455 IRX6P78412 446 aaPredicted RBP21.32■■□□□ 1
LIMS2-205ENST00000409455 CAMSAP2Q08AD1 1489 aa21.32■■□□□ 1
LIMS2-205ENST00000409455 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
LIMS2-205ENST00000409455 KDM5BQ9UGL1 1544 aa21.29■■□□□ 1
LIMS2-205ENST00000409455 CDC42BPAQ5VT25 1732 aa21.28■■□□□ 1
LIMS2-205ENST00000409455 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
LIMS2-205ENST00000409455 PPP4R2Q9NY27 417 aa21.27■■□□□ 1
LIMS2-205ENST00000409455 AKNAQ7Z591 1439 aa21.27■□□□□ 0.99
LIMS2-205ENST00000409455 ZCCHC11Q5TAX3 1644 aaKnown RBP21.25■□□□□ 0.99
LIMS2-205ENST00000409455 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
LIMS2-205ENST00000409455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.22■□□□□ 0.99
LIMS2-205ENST00000409455 HNRNPMP52272 730 aaKnown RBP eCLIP21.21■□□□□ 0.99
LIMS2-205ENST00000409455 KDM6BO15054 1643 aa21.19■□□□□ 0.98
LIMS2-205ENST00000409455 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
LIMS2-205ENST00000409455 GCC2Q8IWJ2 1684 aa21.19■□□□□ 0.98
LIMS2-205ENST00000409455 DEKP35659 375 aaKnown RBP21.18■□□□□ 0.98
LIMS2-205ENST00000409455 NCOA1Q15788 1441 aa21.18■□□□□ 0.98
LIMS2-205ENST00000409455 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
LIMS2-205ENST00000409455 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
LIMS2-205ENST00000409455 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
LIMS2-205ENST00000409455 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
LIMS2-205ENST00000409455 MBD5Q9P267 1494 aa21.14■□□□□ 0.97
LIMS2-205ENST00000409455 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
LIMS2-205ENST00000409455 SAMD9LQ8IVG5 1584 aa21.13■□□□□ 0.97
LIMS2-205ENST00000409455 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
LIMS2-205ENST00000409455 ADGRL2O95490 1459 aa21.11■□□□□ 0.97
LIMS2-205ENST00000409455 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
LIMS2-205ENST00000409455 PLCH2O75038 1416 aa21.11■□□□□ 0.97
LIMS2-205ENST00000409455 C9orf84Q5VXU9 1444 aa21.11■□□□□ 0.97
LIMS2-205ENST00000409455 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
LIMS2-205ENST00000409455 WDR7Q9Y4E6 1490 aa21.1■□□□□ 0.97
LIMS2-205ENST00000409455 RSPH4AQ5TD94 716 aa21.1■□□□□ 0.97
LIMS2-205ENST00000409455 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
LIMS2-205ENST00000409455 NPM1P06748 294 aaKnown RBP eCLIP21.09■□□□□ 0.97
LIMS2-205ENST00000409455 NOP58Q9Y2X3 529 aaKnown RBP21.09■□□□□ 0.97
LIMS2-205ENST00000409455 B4GALNT3Q6L9W6 998 aa21.09■□□□□ 0.97
LIMS2-205ENST00000409455 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.96
LIMS2-205ENST00000409455 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
LIMS2-205ENST00000409455 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-205ENST00000409455 MYO5CQ9NQX4 1742 aa21.07■□□□□ 0.96
LIMS2-205ENST00000409455 ARHGEF5Q12774 1597 aa21.07■□□□□ 0.96
LIMS2-205ENST00000409455 ASXL2Q76L83 1435 aa21.07■□□□□ 0.96
LIMS2-205ENST00000409455 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
LIMS2-205ENST00000409455 HSPA5P11021 654 aaKnown RBP21.07■□□□□ 0.96
LIMS2-205ENST00000409455 CCDC141Q6ZP82 1450 aa21.06■□□□□ 0.96
LIMS2-205ENST00000409455 ADGBQ8N7X0 1667 aa21.05■□□□□ 0.96
LIMS2-205ENST00000409455 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
LIMS2-205ENST00000409455 ZBED9Q6R2W3 1325 aa21.05■□□□□ 0.96
LIMS2-205ENST00000409455 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
LIMS2-205ENST00000409455 KIAA1107Q9UPP5 1409 aa21.04■□□□□ 0.96
LIMS2-205ENST00000409455 FOXD1Q16676 465 aa21.03■□□□□ 0.96
LIMS2-205ENST00000409455 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
LIMS2-205ENST00000409455 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
LIMS2-205ENST00000409455 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
LIMS2-205ENST00000409455 PLEKHH2Q8IVE3 1493 aa21.01■□□□□ 0.95
LIMS2-205ENST00000409455 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
LIMS2-205ENST00000409455 KIF15Q9NS87 1388 aa21■□□□□ 0.95
LIMS2-205ENST00000409455 NBR1Q14596 966 aa21■□□□□ 0.95
LIMS2-205ENST00000409455 CCDC184Q52MB2 194 aa21■□□□□ 0.95
LIMS2-205ENST00000409455 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
LIMS2-205ENST00000409455 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
LIMS2-205ENST00000409455 MRS2Q9HD23 443 aa20.99■□□□□ 0.95
LIMS2-205ENST00000409455 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
LIMS2-205ENST00000409455 PZPP20742 1482 aa20.94■□□□□ 0.94
LIMS2-205ENST00000409455 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
LIMS2-205ENST00000409455 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
LIMS2-205ENST00000409455 PAK3O75914 559 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms