RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
PRAME-205ENST00000405655 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
PRAME-205ENST00000405655 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
PRAME-205ENST00000405655 ABCC10Q5T3U5 1492 aa20.55■□□□□ 0.88
PRAME-205ENST00000405655 FOXD1Q16676 465 aa20.54■□□□□ 0.88
PRAME-205ENST00000405655 DNMT1P26358 1616 aaKnown RBP20.54■□□□□ 0.88
PRAME-205ENST00000405655 GCC2Q8IWJ2 1684 aa20.52■□□□□ 0.88
PRAME-205ENST00000405655 ITSN2Q9NZM3 1697 aa20.51■□□□□ 0.87
PRAME-205ENST00000405655 HNRNPMP52272 730 aaKnown RBP eCLIP20.5■□□□□ 0.873e-11■□□□□ 9.5
PRAME-205ENST00000405655 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
PRAME-205ENST00000405655 ABCC2Q92887 1545 aa20.49■□□□□ 0.87
PRAME-205ENST00000405655 CDC42BPBQ9Y5S2 1711 aa20.46■□□□□ 0.87
PRAME-205ENST00000405655 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
PRAME-205ENST00000405655 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
PRAME-205ENST00000405655 ZCCHC11Q5TAX3 1644 aaKnown RBP20.44■□□□□ 0.86
PRAME-205ENST00000405655 HIRIP3Q9BW71 556 aaPredicted RBP20.41■□□□□ 0.86
PRAME-205ENST00000405655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.867e-13■□□□□ 11.3
PRAME-205ENST00000405655 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
PRAME-205ENST00000405655 CROCC2H7BZ55 1655 aa20.4■□□□□ 0.86
PRAME-205ENST00000405655 SAMD9LQ8IVG5 1584 aa20.39■□□□□ 0.85
PRAME-205ENST00000405655 NCOA1Q15788 1441 aa20.38■□□□□ 0.85
PRAME-205ENST00000405655 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
PRAME-205ENST00000405655 ROCK1Q13464 1354 aa20.37■□□□□ 0.85
PRAME-205ENST00000405655 PREX2Q70Z35 1606 aa20.36■□□□□ 0.85
PRAME-205ENST00000405655 ADGBQ8N7X0 1667 aa20.35■□□□□ 0.85
PRAME-205ENST00000405655 MIER1Q8N108 512 aa20.34■□□□□ 0.85
PRAME-205ENST00000405655 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.85
PRAME-205ENST00000405655 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
PRAME-205ENST00000405655 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
PRAME-205ENST00000405655 MBD5Q9P267 1494 aa20.32■□□□□ 0.84
PRAME-205ENST00000405655 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
PRAME-205ENST00000405655 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
PRAME-205ENST00000405655 SYCP2Q9BX26 1530 aa20.31■□□□□ 0.84
PRAME-205ENST00000405655 TONSLQ96HA7 1378 aa20.3■□□□□ 0.84
PRAME-205ENST00000405655 UHRF1BP1LA0JNW5 1464 aa20.3■□□□□ 0.84
PRAME-205ENST00000405655 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
PRAME-205ENST00000405655 ANKRD30AQ9BXX3 1397 aa20.28■□□□□ 0.84
PRAME-205ENST00000405655 TSPY4P0CV99 314 aa20.28■□□□□ 0.84
PRAME-205ENST00000405655 TSPY10P0CW01 314 aa20.28■□□□□ 0.84
PRAME-205ENST00000405655 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
PRAME-205ENST00000405655 ADGRL2O95490 1459 aa20.27■□□□□ 0.84
PRAME-205ENST00000405655 PZPP20742 1482 aa20.26■□□□□ 0.83
PRAME-205ENST00000405655 ANKRD50Q9ULJ7 1429 aa20.25■□□□□ 0.83
PRAME-205ENST00000405655 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
PRAME-205ENST00000405655 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
PRAME-205ENST00000405655 ARHGEF5Q12774 1597 aa20.21■□□□□ 0.83
PRAME-205ENST00000405655 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
PRAME-205ENST00000405655 PKD2Q13563 968 aa20.2■□□□□ 0.82
PRAME-205ENST00000405655 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
PRAME-205ENST00000405655 PLCH2O75038 1416 aa20.19■□□□□ 0.82
PRAME-205ENST00000405655 SHANK2Q9UPX8 1470 aa20.19■□□□□ 0.82
PRAME-205ENST00000405655 NUP155O75694 1391 aa20.18■□□□□ 0.82
PRAME-205ENST00000405655 TRAPPC8Q9Y2L5 1435 aa20.17■□□□□ 0.82
PRAME-205ENST00000405655 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
PRAME-205ENST00000405655 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
PRAME-205ENST00000405655 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
PRAME-205ENST00000405655 AFAP1Q8N556 730 aa20.17■□□□□ 0.82
PRAME-205ENST00000405655 ASXL2Q76L83 1435 aa20.16■□□□□ 0.82
PRAME-205ENST00000405655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.825e-17■■□□□ 11.4
PRAME-205ENST00000405655 EFCAB2Q5VUJ9 269 aa20.15■□□□□ 0.82
PRAME-205ENST00000405655 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
PRAME-205ENST00000405655 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
PRAME-205ENST00000405655 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
PRAME-205ENST00000405655 ABCC1P33527 1531 aa20.09■□□□□ 0.81
PRAME-205ENST00000405655 RPRD2Q5VT52 1461 aaKnown RBP20.09■□□□□ 0.81
PRAME-205ENST00000405655 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
PRAME-205ENST00000405655 KIAA1107Q9UPP5 1409 aa20.08■□□□□ 0.8
PRAME-205ENST00000405655 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
PRAME-205ENST00000405655 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
PRAME-205ENST00000405655 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
PRAME-205ENST00000405655 FANCAO15360 1455 aa20.05■□□□□ 0.8
PRAME-205ENST00000405655 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
PRAME-205ENST00000405655 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
PRAME-205ENST00000405655 MAST1Q9Y2H9 1570 aa20.04■□□□□ 0.8
PRAME-205ENST00000405655 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
PRAME-205ENST00000405655 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
PRAME-205ENST00000405655 FAM135AQ9P2D6 1515 aa20.01■□□□□ 0.79
PRAME-205ENST00000405655 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
PRAME-205ENST00000405655 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
PRAME-205ENST00000405655 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
PRAME-205ENST00000405655 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
PRAME-205ENST00000405655 KDM2AQ9Y2K7 1162 aa19.98■□□□□ 0.79
PRAME-205ENST00000405655 KDM5DQ9BY66 1539 aa19.98■□□□□ 0.79
PRAME-205ENST00000405655 ADGRL1O94910 1474 aa19.97■□□□□ 0.79
PRAME-205ENST00000405655 C11orf95C9JLR9 678 aaPredicted RBP19.95■□□□□ 0.78
PRAME-205ENST00000405655 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
PRAME-205ENST00000405655 DUOX2Q9NRD8 1548 aa19.94■□□□□ 0.78
PRAME-205ENST00000405655 ARAP3Q8WWN8 1544 aa19.94■□□□□ 0.78
PRAME-205ENST00000405655 UNC13BO14795 1591 aa19.94■□□□□ 0.78
PRAME-205ENST00000405655 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
PRAME-205ENST00000405655 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
PRAME-205ENST00000405655 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
PRAME-205ENST00000405655 RGL3Q3MIN7 710 aa19.93■□□□□ 0.78
PRAME-205ENST00000405655 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
PRAME-205ENST00000405655 PLA2R1Q13018 1463 aa19.91■□□□□ 0.78
PRAME-205ENST00000405655 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
PRAME-205ENST00000405655 ATP7AQ04656 1500 aa19.89■□□□□ 0.77
PRAME-205ENST00000405655 DCAF11Q8TEB1 546 aa19.88■□□□□ 0.77
PRAME-205ENST00000405655 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
PRAME-205ENST00000405655 IQGAP3Q86VI3 1631 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms