RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 CHIC2Q9UKJ5 165 aa23.89■■□□□ 1.41
PARVB-203ENST00000404989 RRP7BPQ9NSQ0 103 aa23.86■■□□□ 1.41
PARVB-203ENST00000404989 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
PARVB-203ENST00000404989 ZCCHC11Q5TAX3 1644 aaKnown RBP23.83■■□□□ 1.41
PARVB-203ENST00000404989 KDM6BO15054 1643 aa23.83■■□□□ 1.4
PARVB-203ENST00000404989 KDM5BQ9UGL1 1544 aa23.82■■□□□ 1.4
PARVB-203ENST00000404989 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
PARVB-203ENST00000404989 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
PARVB-203ENST00000404989 CDC42BPBQ9Y5S2 1711 aa23.78■■□□□ 1.4
PARVB-203ENST00000404989 ZNF777Q9ULD5 760 aaPredicted RBP23.78■■□□□ 1.4
PARVB-203ENST00000404989 PREX2Q70Z35 1606 aa23.77■■□□□ 1.4
PARVB-203ENST00000404989 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
PARVB-203ENST00000404989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.39
PARVB-203ENST00000404989 TTC37Q6PGP7 1564 aa23.75■■□□□ 1.39
PARVB-203ENST00000404989 ADGBQ8N7X0 1667 aa23.74■■□□□ 1.39
PARVB-203ENST00000404989 ADGRL2O95490 1459 aa23.72■■□□□ 1.39
PARVB-203ENST00000404989 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
PARVB-203ENST00000404989 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
PARVB-203ENST00000404989 SAMD9LQ8IVG5 1584 aa23.7■■□□□ 1.39
PARVB-203ENST00000404989 NCOA1Q15788 1441 aa23.7■■□□□ 1.38
PARVB-203ENST00000404989 ARHGEF5Q12774 1597 aa23.68■■□□□ 1.38
PARVB-203ENST00000404989 DENND4BO75064 1496 aaPredicted RBP23.67■■□□□ 1.38
PARVB-203ENST00000404989 MBD5Q9P267 1494 aa23.67■■□□□ 1.38
PARVB-203ENST00000404989 MYO5CQ9NQX4 1742 aa23.67■■□□□ 1.38
PARVB-203ENST00000404989 SHANK2Q9UPX8 1470 aa23.67■■□□□ 1.38
PARVB-203ENST00000404989 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
PARVB-203ENST00000404989 HNRNPMP52272 730 aaKnown RBP eCLIP23.63■■□□□ 1.37
PARVB-203ENST00000404989 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
PARVB-203ENST00000404989 TRIM52Q96A61 297 aa23.62■■□□□ 1.37
PARVB-203ENST00000404989 TIMELESSQ9UNS1 1208 aa23.62■■□□□ 1.37
PARVB-203ENST00000404989 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
PARVB-203ENST00000404989 ARHGAP5Q13017 1502 aa23.61■■□□□ 1.37
PARVB-203ENST00000404989 C9orf84Q5VXU9 1444 aa23.61■■□□□ 1.37
PARVB-203ENST00000404989 PLCH2O75038 1416 aa23.6■■□□□ 1.37
PARVB-203ENST00000404989 MPHOSPH9Q99550 1183 aa23.58■■□□□ 1.37
PARVB-203ENST00000404989 CCDC141Q6ZP82 1450 aa23.57■■□□□ 1.36
PARVB-203ENST00000404989 WDR7Q9Y4E6 1490 aa23.57■■□□□ 1.36
PARVB-203ENST00000404989 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
PARVB-203ENST00000404989 SYCP2Q9BX26 1530 aa23.55■■□□□ 1.36
PARVB-203ENST00000404989 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
PARVB-203ENST00000404989 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
PARVB-203ENST00000404989 KIAA1107Q9UPP5 1409 aa23.55■■□□□ 1.36
PARVB-203ENST00000404989 PLEKHH2Q8IVE3 1493 aa23.53■■□□□ 1.36
PARVB-203ENST00000404989 MAST1Q9Y2H9 1570 aa23.53■■□□□ 1.36
PARVB-203ENST00000404989 DIEXFQ68CQ4 756 aaKnown RBP23.52■■□□□ 1.36
PARVB-203ENST00000404989 ARHGEF12Q9NZN5 1544 aa23.52■■□□□ 1.36
PARVB-203ENST00000404989 PZPP20742 1482 aa23.51■■□□□ 1.35
PARVB-203ENST00000404989 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
PARVB-203ENST00000404989 ARAP3Q8WWN8 1544 aa23.51■■□□□ 1.35
PARVB-203ENST00000404989 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
PARVB-203ENST00000404989 PPP1R15AO75807 674 aaPredicted RBP23.49■■□□□ 1.35
PARVB-203ENST00000404989 EFCAB2Q5VUJ9 269 aa23.49■■□□□ 1.35
PARVB-203ENST00000404989 ABCA9Q8IUA7 1624 aa23.48■■□□□ 1.35
PARVB-203ENST00000404989 ABCC1P33527 1531 aa23.47■■□□□ 1.35
PARVB-203ENST00000404989 KIF15Q9NS87 1388 aa23.46■■□□□ 1.35
PARVB-203ENST00000404989 ANKRD30BQ9BXX2 1392 aa23.44■■□□□ 1.34
PARVB-203ENST00000404989 FOXD1Q16676 465 aa23.44■■□□□ 1.34
PARVB-203ENST00000404989 TONSLQ96HA7 1378 aa23.44■■□□□ 1.34
PARVB-203ENST00000404989 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
PARVB-203ENST00000404989 PLXNC1O60486 1568 aa23.41■■□□□ 1.34
PARVB-203ENST00000404989 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
PARVB-203ENST00000404989 NPM1P06748 294 aaKnown RBP eCLIP23.4■■□□□ 1.34
PARVB-203ENST00000404989 TRAPPC8Q9Y2L5 1435 aa23.39■■□□□ 1.33
PARVB-203ENST00000404989 NUP155O75694 1391 aa23.34■■□□□ 1.33
PARVB-203ENST00000404989 FANCAO15360 1455 aa23.34■■□□□ 1.33
PARVB-203ENST00000404989 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
PARVB-203ENST00000404989 DUOX2Q9NRD8 1548 aa23.31■■□□□ 1.32
PARVB-203ENST00000404989 PKD2Q13563 968 aa23.31■■□□□ 1.32
PARVB-203ENST00000404989 UNC13BO14795 1591 aa23.3■■□□□ 1.32
PARVB-203ENST00000404989 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
PARVB-203ENST00000404989 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
PARVB-203ENST00000404989 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
PARVB-203ENST00000404989 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
PARVB-203ENST00000404989 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
PARVB-203ENST00000404989 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
PARVB-203ENST00000404989 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
PARVB-203ENST00000404989 ZFYVE16Q7Z3T8 1539 aa23.25■■□□□ 1.31
PARVB-203ENST00000404989 FAM135AQ9P2D6 1515 aa23.25■■□□□ 1.31
PARVB-203ENST00000404989 ADGRL1O94910 1474 aa23.25■■□□□ 1.31
PARVB-203ENST00000404989 TEX14Q8IWB6 1497 aa23.25■■□□□ 1.31
PARVB-203ENST00000404989 SPAG9O60271 1321 aaKnown RBP23.24■■□□□ 1.31
PARVB-203ENST00000404989 SCAPERQ9BY12 1400 aa23.24■■□□□ 1.31
PARVB-203ENST00000404989 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
PARVB-203ENST00000404989 CD109Q6YHK3 1445 aa23.22■■□□□ 1.31
PARVB-203ENST00000404989 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
PARVB-203ENST00000404989 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
PARVB-203ENST00000404989 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
PARVB-203ENST00000404989 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
PARVB-203ENST00000404989 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
PARVB-203ENST00000404989 MIER1Q8N108 512 aa23.17■■□□□ 1.3
PARVB-203ENST00000404989 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
PARVB-203ENST00000404989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.29
PARVB-203ENST00000404989 KIDINS220Q9ULH0 1771 aa23.12■■□□□ 1.29
PARVB-203ENST00000404989 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
PARVB-203ENST00000404989 MAP3K4Q9Y6R4 1608 aa23.1■■□□□ 1.29
PARVB-203ENST00000404989 DEPDC5O75140 1603 aa23.09■■□□□ 1.29
PARVB-203ENST00000404989 GLI2P10070 1586 aa23.09■■□□□ 1.29
PARVB-203ENST00000404989 ZNF518AQ6AHZ1 1483 aa23.09■■□□□ 1.29
PARVB-203ENST00000404989 PLA2R1Q13018 1463 aa23.09■■□□□ 1.29
PARVB-203ENST00000404989 KDM5CP41229 1560 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms