RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 ABCC5O15440 1437 aa25.66■■□□□ 1.7
CHTOP-205ENST00000403433 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
CHTOP-205ENST00000403433 CAMSAP2Q08AD1 1489 aa25.64■■□□□ 1.69
CHTOP-205ENST00000403433 TRIM52Q96A61 297 aa25.62■■□□□ 1.69
CHTOP-205ENST00000403433 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
CHTOP-205ENST00000403433 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
CHTOP-205ENST00000403433 ADGBQ8N7X0 1667 aa25.6■■□□□ 1.69
CHTOP-205ENST00000403433 CFDP1Q9UEE9 299 aaPredicted RBP25.59■■□□□ 1.69
CHTOP-205ENST00000403433 CROCC2H7BZ55 1655 aa25.58■■□□□ 1.68
CHTOP-205ENST00000403433 DENND4BO75064 1496 aaPredicted RBP25.57■■□□□ 1.68
CHTOP-205ENST00000403433 ATP10BO94823 1461 aa25.57■■□□□ 1.68
CHTOP-205ENST00000403433 CDC42BPAQ5VT25 1732 aa25.55■■□□□ 1.68
CHTOP-205ENST00000403433 PLEKHD1A6NEE1 506 aa25.54■■□□□ 1.68
CHTOP-205ENST00000403433 PTPRGP23470 1445 aa25.53■■□□□ 1.68
CHTOP-205ENST00000403433 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
CHTOP-205ENST00000403433 MPHOSPH9Q99550 1183 aa25.52■■□□□ 1.68
CHTOP-205ENST00000403433 KDM5BQ9UGL1 1544 aa25.51■■□□□ 1.67
CHTOP-205ENST00000403433 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
CHTOP-205ENST00000403433 GTF3C3Q9Y5Q9 886 aa25.49■■□□□ 1.67
CHTOP-205ENST00000403433 ADGRL2O95490 1459 aa25.48■■□□□ 1.67
CHTOP-205ENST00000403433 ZNF777Q9ULD5 760 aaPredicted RBP25.47■■□□□ 1.67
CHTOP-205ENST00000403433 NCOA1Q15788 1441 aa25.44■■□□□ 1.66
CHTOP-205ENST00000403433 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
CHTOP-205ENST00000403433 ANKRD30AQ9BXX3 1397 aa25.4■■□□□ 1.66
CHTOP-205ENST00000403433 DDX10Q13206 875 aaKnown RBP25.39■■□□□ 1.66
CHTOP-205ENST00000403433 HIRIP3Q9BW71 556 aaPredicted RBP25.37■■□□□ 1.65
CHTOP-205ENST00000403433 ANKRD30BQ9BXX2 1392 aa25.37■■□□□ 1.65
CHTOP-205ENST00000403433 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CHTOP-205ENST00000403433 SLC4A1APQ9BWU0 796 aaKnown RBP25.35■■□□□ 1.65
CHTOP-205ENST00000403433 RPRD2Q5VT52 1461 aaKnown RBP25.35■■□□□ 1.65
CHTOP-205ENST00000403433 PREX2Q70Z35 1606 aa25.35■■□□□ 1.65
CHTOP-205ENST00000403433 PZPP20742 1482 aa25.35■■□□□ 1.65
CHTOP-205ENST00000403433 ARHGEF5Q12774 1597 aa25.33■■□□□ 1.65
CHTOP-205ENST00000403433 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
CHTOP-205ENST00000403433 ERCC6L2Q5T890 1561 aa25.32■■□□□ 1.64
CHTOP-205ENST00000403433 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
CHTOP-205ENST00000403433 CDC42BPBQ9Y5S2 1711 aa25.31■■□□□ 1.64
CHTOP-205ENST00000403433 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
CHTOP-205ENST00000403433 CLASP1Q7Z460 1538 aa25.29■■□□□ 1.64
CHTOP-205ENST00000403433 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
CHTOP-205ENST00000403433 SAMD9LQ8IVG5 1584 aa25.28■■□□□ 1.64
CHTOP-205ENST00000403433 L3MBTL2Q969R5 705 aa25.27■■□□□ 1.64
CHTOP-205ENST00000403433 TSPY4P0CV99 314 aa25.24■■□□□ 1.63
CHTOP-205ENST00000403433 TSPY10P0CW01 314 aa25.24■■□□□ 1.63
CHTOP-205ENST00000403433 KIAA1107Q9UPP5 1409 aa25.24■■□□□ 1.63
CHTOP-205ENST00000403433 TTC37Q6PGP7 1564 aa25.24■■□□□ 1.63
CHTOP-205ENST00000403433 CCDC141Q6ZP82 1450 aa25.23■■□□□ 1.63
CHTOP-205ENST00000403433 MBD5Q9P267 1494 aa25.23■■□□□ 1.63
CHTOP-205ENST00000403433 MYO5CQ9NQX4 1742 aa25.21■■□□□ 1.63
CHTOP-205ENST00000403433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.21■■□□□ 1.63
CHTOP-205ENST00000403433 ARHGAP5Q13017 1502 aa25.2■■□□□ 1.62
CHTOP-205ENST00000403433 KDM5DQ9BY66 1539 aa25.19■■□□□ 1.62
CHTOP-205ENST00000403433 ANP32CO43423 234 aa25.19■■□□□ 1.62
CHTOP-205ENST00000403433 HNRNPMP52272 730 aaKnown RBP eCLIP25.19■■□□□ 1.629e-8■■■■■ 28.7
CHTOP-205ENST00000403433 KIF15Q9NS87 1388 aa25.18■■□□□ 1.62
CHTOP-205ENST00000403433 HSPA5P11021 654 aaKnown RBP25.18■■□□□ 1.62
CHTOP-205ENST00000403433 EIF4G2P78344 907 aaKnown RBP eCLIP25.18■■□□□ 1.62
CHTOP-205ENST00000403433 ZCCHC11Q5TAX3 1644 aaKnown RBP25.16■■□□□ 1.62
CHTOP-205ENST00000403433 SYCP2Q9BX26 1530 aa25.15■■□□□ 1.62
CHTOP-205ENST00000403433 RSPH4AQ5TD94 716 aa25.15■■□□□ 1.62
CHTOP-205ENST00000403433 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
CHTOP-205ENST00000403433 PKD2Q13563 968 aa25.14■■□□□ 1.62
CHTOP-205ENST00000403433 KCNH8Q96L42 1107 aa25.14■■□□□ 1.62
CHTOP-205ENST00000403433 NUP155O75694 1391 aa25.14■■□□□ 1.61
CHTOP-205ENST00000403433 MAST1Q9Y2H9 1570 aa25.13■■□□□ 1.61
CHTOP-205ENST00000403433 CCER2I3L3R5 266 aa25.12■■□□□ 1.61
CHTOP-205ENST00000403433 PLEKHH2Q8IVE3 1493 aa25.11■■□□□ 1.61
CHTOP-205ENST00000403433 NBPF8Q3BBV2 869 aa25.09■■□□□ 1.61
CHTOP-205ENST00000403433 WASHC2AQ641Q2 1341 aa25.07■■□□□ 1.6
CHTOP-205ENST00000403433 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
CHTOP-205ENST00000403433 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
CHTOP-205ENST00000403433 UNC13BO14795 1591 aa25.01■■□□□ 1.59
CHTOP-205ENST00000403433 FAM135AQ9P2D6 1515 aa25.01■■□□□ 1.59
CHTOP-205ENST00000403433 PLCH2O75038 1416 aa25■■□□□ 1.59
CHTOP-205ENST00000403433 ARHGEF12Q9NZN5 1544 aa24.99■■□□□ 1.59
CHTOP-205ENST00000403433 CNTLNQ9NXG0 1405 aa24.98■■□□□ 1.59
CHTOP-205ENST00000403433 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
CHTOP-205ENST00000403433 CCDC7Q96M83 1385 aa24.97■■□□□ 1.59
CHTOP-205ENST00000403433 ABCC1P33527 1531 aa24.96■■□□□ 1.59
CHTOP-205ENST00000403433 DUOX2Q9NRD8 1548 aa24.94■■□□□ 1.58
CHTOP-205ENST00000403433 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
CHTOP-205ENST00000403433 EFCAB2Q5VUJ9 269 aa24.92■■□□□ 1.58
CHTOP-205ENST00000403433 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
CHTOP-205ENST00000403433 ARAP3Q8WWN8 1544 aa24.91■■□□□ 1.58
CHTOP-205ENST00000403433 ZNF326Q5BKZ1 582 aaKnown RBP24.9■■□□□ 1.58
CHTOP-205ENST00000403433 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.58
CHTOP-205ENST00000403433 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.58
CHTOP-205ENST00000403433 KDM5CP41229 1560 aa24.88■■□□□ 1.57
CHTOP-205ENST00000403433 ERBINQ96RT1 1412 aa24.88■■□□□ 1.57
CHTOP-205ENST00000403433 USP47Q96K76 1375 aa24.87■■□□□ 1.57
CHTOP-205ENST00000403433 WDR7Q9Y4E6 1490 aa24.86■■□□□ 1.57
CHTOP-205ENST00000403433 KIF7Q2M1P5 1343 aa24.85■■□□□ 1.57
CHTOP-205ENST00000403433 MAGI2Q86UL8 1455 aa24.84■■□□□ 1.57
CHTOP-205ENST00000403433 PELP1Q8IZL8 1130 aaKnown RBP24.84■■□□□ 1.57
CHTOP-205ENST00000403433 CCDC144AA2RUR9 1427 aa24.84■■□□□ 1.57
CHTOP-205ENST00000403433 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
CHTOP-205ENST00000403433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.81■■□□□ 1.564e-10■□□□□ 9.2
CHTOP-205ENST00000403433 BCORL1Q5H9F3 1711 aa24.81■■□□□ 1.56
CHTOP-205ENST00000403433 ABCA9Q8IUA7 1624 aa24.79■■□□□ 1.56
CHTOP-205ENST00000403433 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms