RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 OCEL1Q9H607 264 aa8.86□□□□□ -0.99
C1GALT1-202ENST00000402468 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
C1GALT1-202ENST00000402468 TMEM121BQ9BXQ6 578 aaPredicted RBP8.81□□□□□ -1
C1GALT1-202ENST00000402468 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.81□□□□□ -1
C1GALT1-202ENST00000402468 PHF8Q9UPP1 1060 aa8.81□□□□□ -1
C1GALT1-202ENST00000402468 MKRN3Q13064 507 aaKnown RBP8.8□□□□□ -1
C1GALT1-202ENST00000402468 FBXO22Q8NEZ5 403 aa8.8□□□□□ -1
C1GALT1-202ENST00000402468 SNPHO15079 494 aa8.78□□□□□ -1
C1GALT1-202ENST00000402468 CADPS2Q86UW7 1296 aa8.77□□□□□ -1.01
C1GALT1-202ENST00000402468 SPNS2Q8IVW8 549 aa8.77□□□□□ -1.01
C1GALT1-202ENST00000402468 MMRN1Q13201 1228 aa8.76□□□□□ -1.01
C1GALT1-202ENST00000402468 MARVELD3Q96A59 401 aa8.76□□□□□ -1.01
C1GALT1-202ENST00000402468 TULP1O00294 542 aaPredicted RBP8.75□□□□□ -1.01
C1GALT1-202ENST00000402468 PPP1R37O75864 691 aa8.75□□□□□ -1.01
C1GALT1-202ENST00000402468 PDCD7Q8N8D1 485 aaKnown RBP8.74□□□□□ -1.01
C1GALT1-202ENST00000402468 KCNV2Q8TDN2 545 aa8.73□□□□□ -1.01
C1GALT1-202ENST00000402468 PDE4AP27815 886 aa8.71□□□□□ -1.02
C1GALT1-202ENST00000402468 E2F4Q16254 413 aa8.71□□□□□ -1.02
C1GALT1-202ENST00000402468 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
C1GALT1-202ENST00000402468 ARHGEF1Q92888 912 aaKnown RBP8.69□□□□□ -1.02
C1GALT1-202ENST00000402468 L3MBTL3Q96JM7 780 aaPredicted RBP8.69□□□□□ -1.02
C1GALT1-202ENST00000402468 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
C1GALT1-202ENST00000402468 EMP3P54852 163 aa8.67□□□□□ -1.02
C1GALT1-202ENST00000402468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.67□□□□□ -1.024e-8■■□□□ 14.4
C1GALT1-202ENST00000402468 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
C1GALT1-202ENST00000402468 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
C1GALT1-202ENST00000402468 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
C1GALT1-202ENST00000402468 POTEB3A0JP26 581 aa8.63□□□□□ -1.03
C1GALT1-202ENST00000402468 POTEBQ6S5H4 581 aa8.63□□□□□ -1.03
C1GALT1-202ENST00000402468 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
C1GALT1-202ENST00000402468 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
C1GALT1-202ENST00000402468 MFSD10Q14728 455 aa8.62□□□□□ -1.03
C1GALT1-202ENST00000402468 FAM205CA6NFA0 338 aa8.61□□□□□ -1.03
C1GALT1-202ENST00000402468 G3V3G9 751 aa8.61□□□□□ -1.03
C1GALT1-202ENST00000402468 LMOD2Q6P5Q4 547 aa8.61□□□□□ -1.03
C1GALT1-202ENST00000402468 ILDR1Q86SU0 546 aaPredicted RBP8.61□□□□□ -1.03
C1GALT1-202ENST00000402468 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
C1GALT1-202ENST00000402468 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
C1GALT1-202ENST00000402468 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
C1GALT1-202ENST00000402468 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
C1GALT1-202ENST00000402468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
C1GALT1-202ENST00000402468 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
C1GALT1-202ENST00000402468 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
C1GALT1-202ENST00000402468 TMC2Q8TDI7 906 aa8.55□□□□□ -1.04
C1GALT1-202ENST00000402468 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
C1GALT1-202ENST00000402468 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
C1GALT1-202ENST00000402468 CAMK2BQ13554 666 aa8.54□□□□□ -1.04
C1GALT1-202ENST00000402468 BOLA1Q9Y3E2 137 aa8.54□□□□□ -1.04
C1GALT1-202ENST00000402468 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
C1GALT1-202ENST00000402468 MICALL2Q8IY33 904 aa8.53□□□□□ -1.04
C1GALT1-202ENST00000402468 SEMA3EO15041 775 aa8.52□□□□□ -1.05
C1GALT1-202ENST00000402468 HOXB1P14653 301 aaPredicted RBP8.49□□□□□ -1.05
C1GALT1-202ENST00000402468 FOXK1P85037 733 aa8.48□□□□□ -1.05
C1GALT1-202ENST00000402468 ZNF710Q8N1W2 664 aa8.48□□□□□ -1.05
C1GALT1-202ENST00000402468 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
C1GALT1-202ENST00000402468 DSG2Q14126 1118 aa8.46□□□□□ -1.06
C1GALT1-202ENST00000402468 DOK7Q18PE1 504 aa8.45□□□□□ -1.06
C1GALT1-202ENST00000402468 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
C1GALT1-202ENST00000402468 ERBB3P21860 1342 aa8.45□□□□□ -1.06
C1GALT1-202ENST00000402468 PLPP6Q8IY26 295 aa8.43□□□□□ -1.06
C1GALT1-202ENST00000402468 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
C1GALT1-202ENST00000402468 DPYSL4O14531 572 aa8.42□□□□□ -1.06
C1GALT1-202ENST00000402468 PDIA6Q15084 440 aa8.41□□□□□ -1.06
C1GALT1-202ENST00000402468 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
C1GALT1-202ENST00000402468 MAP3K9P80192 1104 aa8.4□□□□□ -1.06
C1GALT1-202ENST00000402468 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
C1GALT1-202ENST00000402468 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
C1GALT1-202ENST00000402468 EMILIN3Q9NT22 766 aa8.4□□□□□ -1.06
C1GALT1-202ENST00000402468 KIF3CO14782 793 aa8.39□□□□□ -1.07
C1GALT1-202ENST00000402468 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
C1GALT1-202ENST00000402468 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
C1GALT1-202ENST00000402468 TMEM92Q6UXU6 159 aa8.38□□□□□ -1.07
C1GALT1-202ENST00000402468 ZNF316A6NFI3 1004 aaPredicted RBP8.37□□□□□ -1.07
C1GALT1-202ENST00000402468 TBC1D12O60347 775 aa8.36□□□□□ -1.07
C1GALT1-202ENST00000402468 ZMYND10O75800 440 aa8.36□□□□□ -1.07
C1GALT1-202ENST00000402468 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
C1GALT1-202ENST00000402468 SLC24A3Q9HC58 644 aa8.36□□□□□ -1.07
C1GALT1-202ENST00000402468 ZSWIM6Q9HCJ5 1215 aa8.35□□□□□ -1.07
C1GALT1-202ENST00000402468 RBM26Q5T8P6 1007 aaKnown RBP8.34□□□□□ -1.07
C1GALT1-202ENST00000402468 ZNF687Q8N1G0 1237 aa8.34□□□□□ -1.07
C1GALT1-202ENST00000402468 MYT1LQ9UL68 1186 aa8.34□□□□□ -1.07
C1GALT1-202ENST00000402468 GPR153Q6NV75 609 aa8.33□□□□□ -1.08
C1GALT1-202ENST00000402468 BARGINQ6ZT62 677 aa8.33□□□□□ -1.08
C1GALT1-202ENST00000402468 KRI1Q8N9T8 703 aaKnown RBP8.33□□□□□ -1.08
C1GALT1-202ENST00000402468 UPF1Q92900 1129 aaKnown RBP eCLIP8.33□□□□□ -1.08
C1GALT1-202ENST00000402468 NEUROD2Q15784 382 aa8.32□□□□□ -1.08
C1GALT1-202ENST00000402468 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
C1GALT1-202ENST00000402468 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
C1GALT1-202ENST00000402468 ERICH6Q7L0X2 663 aa8.3□□□□□ -1.08
C1GALT1-202ENST00000402468 OXER1Q8TDS5 423 aa8.3□□□□□ -1.08
C1GALT1-202ENST00000402468 AK7Q96M32 723 aa8.3□□□□□ -1.08
C1GALT1-202ENST00000402468 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
C1GALT1-202ENST00000402468 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
C1GALT1-202ENST00000402468 PTGER2P43116 358 aa8.27□□□□□ -1.09
C1GALT1-202ENST00000402468 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
C1GALT1-202ENST00000402468 EVI5O60447 810 aa8.26□□□□□ -1.09
C1GALT1-202ENST00000402468 ARSIQ5FYB1 569 aa8.26□□□□□ -1.09
C1GALT1-202ENST00000402468 PTCD2Q8WV60 388 aaKnown RBP8.25□□□□□ -1.09
C1GALT1-202ENST00000402468 SLC34A2O95436 690 aa8.24□□□□□ -1.09
C1GALT1-202ENST00000402468 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms