RNA–Protein interactions for RNA: ENST00000400470.3

RAB6A-203, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-203ENST00000400470 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
RAB6A-203ENST00000400470 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
RAB6A-203ENST00000400470 POTEB3A0JP26 581 aa9.9□□□□□ -0.82
RAB6A-203ENST00000400470 EMP3P54852 163 aa9.9□□□□□ -0.82
RAB6A-203ENST00000400470 POTEBQ6S5H4 581 aa9.9□□□□□ -0.82
RAB6A-203ENST00000400470 C2orf72A6NCS6 295 aa9.89□□□□□ -0.83
RAB6A-203ENST00000400470 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
RAB6A-203ENST00000400470 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
RAB6A-203ENST00000400470 FAM205CA6NFA0 338 aa9.85□□□□□ -0.83
RAB6A-203ENST00000400470 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
RAB6A-203ENST00000400470 HS3ST6Q96QI5 342 aa9.85□□□□□ -0.83
RAB6A-203ENST00000400470 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
RAB6A-203ENST00000400470 ZSWIM6Q9HCJ5 1215 aa9.83□□□□□ -0.84
RAB6A-203ENST00000400470 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
RAB6A-203ENST00000400470 TMC2Q8TDI7 906 aa9.81□□□□□ -0.84
RAB6A-203ENST00000400470 GTPBP6O43824 516 aaPredicted RBP9.8□□□□□ -0.84
RAB6A-203ENST00000400470 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
RAB6A-203ENST00000400470 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.843e-7■■■□□ 16.4
RAB6A-203ENST00000400470 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
RAB6A-203ENST00000400470 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
RAB6A-203ENST00000400470 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
RAB6A-203ENST00000400470 ERBB3P21860 1342 aa9.77□□□□□ -0.85
RAB6A-203ENST00000400470 SLC34A2O95436 690 aa9.75□□□□□ -0.85
RAB6A-203ENST00000400470 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
RAB6A-203ENST00000400470 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
RAB6A-203ENST00000400470 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
RAB6A-203ENST00000400470 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
RAB6A-203ENST00000400470 FOXK1P85037 733 aa9.73□□□□□ -0.85
RAB6A-203ENST00000400470 PCDHGA4Q9Y5G9 962 aa9.73□□□□□ -0.85
RAB6A-203ENST00000400470 DSG2Q14126 1118 aa9.72□□□□□ -0.85
RAB6A-203ENST00000400470 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
RAB6A-203ENST00000400470 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
RAB6A-203ENST00000400470 NUDT7P0C024 238 aa9.7□□□□□ -0.86
RAB6A-203ENST00000400470 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
RAB6A-203ENST00000400470 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
RAB6A-203ENST00000400470 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
RAB6A-203ENST00000400470 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
RAB6A-203ENST00000400470 PTCD2Q8WV60 388 aaKnown RBP9.67□□□□□ -0.86
RAB6A-203ENST00000400470 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
RAB6A-203ENST00000400470 MMRN1Q13201 1228 aa9.65□□□□□ -0.86
RAB6A-203ENST00000400470 LHX6Q9UPM6 363 aa9.65□□□□□ -0.86
RAB6A-203ENST00000400470 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
RAB6A-203ENST00000400470 BBXQ8WY36 941 aaPredicted RBP9.63□□□□□ -0.87
RAB6A-203ENST00000400470 PDE4AP27815 886 aa9.62□□□□□ -0.87
RAB6A-203ENST00000400470 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
RAB6A-203ENST00000400470 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
RAB6A-203ENST00000400470 MFSD10Q14728 455 aa9.58□□□□□ -0.88
RAB6A-203ENST00000400470 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
RAB6A-203ENST00000400470 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
RAB6A-203ENST00000400470 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
RAB6A-203ENST00000400470 TBC1D12O60347 775 aa9.55□□□□□ -0.88
RAB6A-203ENST00000400470 DDX27Q96GQ7 796 aaKnown RBP9.55□□□□□ -0.88
RAB6A-203ENST00000400470 PBX2P40425 430 aa9.52□□□□□ -0.89
RAB6A-203ENST00000400470 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
RAB6A-203ENST00000400470 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
RAB6A-203ENST00000400470 PSDA5PKW4 1024 aaPredicted RBP9.51□□□□□ -0.89
RAB6A-203ENST00000400470 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
RAB6A-203ENST00000400470 ANKRD13DQ6ZTN6 518 aa9.5□□□□□ -0.89
RAB6A-203ENST00000400470 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
RAB6A-203ENST00000400470 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
RAB6A-203ENST00000400470 ANO8Q9HCE9 1232 aaPredicted RBP9.47□□□□□ -0.89
RAB6A-203ENST00000400470 ARHGAP33O14559 1287 aa9.46□□□□□ -0.9
RAB6A-203ENST00000400470 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
RAB6A-203ENST00000400470 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
RAB6A-203ENST00000400470 EVI5O60447 810 aa9.45□□□□□ -0.9
RAB6A-203ENST00000400470 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
RAB6A-203ENST00000400470 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
RAB6A-203ENST00000400470 PSEN2P49810 448 aa9.44□□□□□ -0.9
RAB6A-203ENST00000400470 DMRTA1Q5VZB9 504 aa9.44□□□□□ -0.9
RAB6A-203ENST00000400470 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
RAB6A-203ENST00000400470 FOSBP53539 338 aa9.43□□□□□ -0.9
RAB6A-203ENST00000400470 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
RAB6A-203ENST00000400470 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
RAB6A-203ENST00000400470 PTGER2P43116 358 aa9.42□□□□□ -0.9
RAB6A-203ENST00000400470 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
RAB6A-203ENST00000400470 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
RAB6A-203ENST00000400470 JPH4Q96JJ6 628 aa9.39□□□□□ -0.91
RAB6A-203ENST00000400470 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
RAB6A-203ENST00000400470 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
RAB6A-203ENST00000400470 TK2O00142 265 aa9.37□□□□□ -0.91
RAB6A-203ENST00000400470 DPYSL4O14531 572 aa9.37□□□□□ -0.91
RAB6A-203ENST00000400470 HRO43593 1189 aa9.36□□□□□ -0.91
RAB6A-203ENST00000400470 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
RAB6A-203ENST00000400470 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
RAB6A-203ENST00000400470 PCDHGA10Q9Y5H3 936 aa9.34□□□□□ -0.91
RAB6A-203ENST00000400470 PTPREP23469 700 aa9.32□□□□□ -0.92
RAB6A-203ENST00000400470 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
RAB6A-203ENST00000400470 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
RAB6A-203ENST00000400470 PHF14O94880 888 aa9.3□□□□□ -0.92
RAB6A-203ENST00000400470 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
RAB6A-203ENST00000400470 E2F4Q16254 413 aa9.29□□□□□ -0.92
RAB6A-203ENST00000400470 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
RAB6A-203ENST00000400470 ZBED2Q9BTP6 218 aa9.29□□□□□ -0.92
RAB6A-203ENST00000400470 PDIA6Q15084 440 aa9.28□□□□□ -0.92
RAB6A-203ENST00000400470 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
RAB6A-203ENST00000400470 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
RAB6A-203ENST00000400470 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
RAB6A-203ENST00000400470 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
RAB6A-203ENST00000400470 COL9A1P20849 921 aa9.25□□□□□ -0.93
RAB6A-203ENST00000400470 DDX12PQ92771 950 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms