RNA–Protein interactions for RNA: ENST00000399586.2

TTC3P1-201, Transcript of tetratricopeptide repeat domain 3 pseudogene 1, humanhuman

BASIC

Gene TTC3P1, Length 6,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P1-201ENST00000399586 KIAA1211Q6ZU35 1233 aa10.36□□□□□ -0.75
TTC3P1-201ENST00000399586 CHMP4BQ9H444 224 aaKnown RBP10.36□□□□□ -0.75
TTC3P1-201ENST00000399586 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
TTC3P1-201ENST00000399586 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
TTC3P1-201ENST00000399586 TNNT3P45378 269 aaPredicted RBP10.35□□□□□ -0.75
TTC3P1-201ENST00000399586 TAF7LQ5H9L4 462 aa10.35□□□□□ -0.75
TTC3P1-201ENST00000399586 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
TTC3P1-201ENST00000399586 STK26Q9P289 416 aa10.34□□□□□ -0.75
TTC3P1-201ENST00000399586 CEP89Q96ST8 783 aa10.34□□□□□ -0.75
TTC3P1-201ENST00000399586 MARCH6O60337 910 aa10.34□□□□□ -0.75
TTC3P1-201ENST00000399586 CNKSR2Q8WXI2 1034 aa10.34□□□□□ -0.75
TTC3P1-201ENST00000399586 NOP58Q9Y2X3 529 aaKnown RBP10.34□□□□□ -0.75
TTC3P1-201ENST00000399586 TOMM22Q9NS69 142 aa10.33□□□□□ -0.76
TTC3P1-201ENST00000399586 NOL8Q76FK4 1167 aaKnown RBP10.32□□□□□ -0.76
TTC3P1-201ENST00000399586 FRAT2O75474 233 aaPredicted RBP10.32□□□□□ -0.76
TTC3P1-201ENST00000399586 MS4A1P11836 297 aa10.32□□□□□ -0.76
TTC3P1-201ENST00000399586 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
TTC3P1-201ENST00000399586 RAD21O60216 631 aa10.31□□□□□ -0.76
TTC3P1-201ENST00000399586 MSH5O43196 834 aa10.31□□□□□ -0.76
TTC3P1-201ENST00000399586 GOLGA6L1Q8N7Z2 621 aa10.31□□□□□ -0.76
TTC3P1-201ENST00000399586 CFDP1Q9UEE9 299 aaPredicted RBP10.3□□□□□ -0.76
TTC3P1-201ENST00000399586 TPM4P67936 248 aa10.3□□□□□ -0.76
TTC3P1-201ENST00000399586 MORC1Q86VD1 984 aa10.29□□□□□ -0.76
TTC3P1-201ENST00000399586 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
TTC3P1-201ENST00000399586 TRIM6-TRIM34B2RNG4 842 aa10.28□□□□□ -0.76
TTC3P1-201ENST00000399586 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
TTC3P1-201ENST00000399586 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
TTC3P1-201ENST00000399586 ITPRIPQ8IWB1 547 aa10.27□□□□□ -0.77
TTC3P1-201ENST00000399586 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
TTC3P1-201ENST00000399586 FOXD4L4Q8WXT5 416 aaPredicted RBP10.26□□□□□ -0.77
TTC3P1-201ENST00000399586 PPP4R2Q9NY27 417 aa10.26□□□□□ -0.77
TTC3P1-201ENST00000399586 HTATSF1O43719 755 aaKnown RBP10.25□□□□□ -0.77
TTC3P1-201ENST00000399586 HDGFP51858 240 aaKnown RBP10.25□□□□□ -0.77
TTC3P1-201ENST00000399586 SLKQ9H2G2 1235 aaPredicted RBP10.25□□□□□ -0.77
TTC3P1-201ENST00000399586 TCEAL9Q9UHQ7 104 aa10.24□□□□□ -0.77
TTC3P1-201ENST00000399586 DCAF11Q8TEB1 546 aa10.24□□□□□ -0.77
TTC3P1-201ENST00000399586 SLC4A10Q6U841 1118 aa10.24□□□□□ -0.77
TTC3P1-201ENST00000399586 TPM3P06753 285 aa10.24□□□□□ -0.77
TTC3P1-201ENST00000399586 TMF1P82094 1093 aa10.23□□□□□ -0.77
TTC3P1-201ENST00000399586 TPD52L1Q16890 204 aaPredicted RBP10.23□□□□□ -0.77
TTC3P1-201ENST00000399586 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
TTC3P1-201ENST00000399586 CTDP1Q9Y5B0 961 aaPredicted RBP10.23□□□□□ -0.77
TTC3P1-201ENST00000399586 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 CCAR2Q8N163 923 aaKnown RBP10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 GGT6Q6P531 493 aa10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 GPATCH3Q96I76 525 aa10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 MFAP1P55081 439 aaKnown RBP10.22□□□□□ -0.77
TTC3P1-201ENST00000399586 SCRIBQ14160 1630 aa10.21□□□□□ -0.77
TTC3P1-201ENST00000399586 HDGFL2Q7Z4V5 671 aaPredicted RBP10.21□□□□□ -0.77
TTC3P1-201ENST00000399586 GBP4Q96PP9 640 aa10.21□□□□□ -0.77
TTC3P1-201ENST00000399586 CCDC34Q96HJ3 373 aa10.21□□□□□ -0.77
TTC3P1-201ENST00000399586 SIN3AQ96ST3 1273 aa10.21□□□□□ -0.78
TTC3P1-201ENST00000399586 DEKP35659 375 aaKnown RBP10.2□□□□□ -0.78
TTC3P1-201ENST00000399586 TRIM34Q9BYJ4 488 aa10.2□□□□□ -0.78
TTC3P1-201ENST00000399586 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 U2AF1L5P0DN76 240 aaPredicted RBP10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 U2AF1Q01081 240 aaKnown RBP eCLIP10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 ZCCHC6Q5VYS8 1495 aaKnown RBP10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 SYAP1Q96A49 352 aaPredicted RBP10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 STK31Q9BXU1 1019 aa10.19□□□□□ -0.78
TTC3P1-201ENST00000399586 IPO8O15397 1037 aaKnown RBP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 FOXD4L6Q3SYB3 417 aaPredicted RBP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 FOXD4L3Q6VB84 417 aaPredicted RBP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 PHF23Q9BUL5 403 aaPredicted RBP10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 KANK1Q14678 1352 aa10.18□□□□□ -0.78
TTC3P1-201ENST00000399586 SETQ01105 290 aaPredicted RBP10.17□□□□□ -0.78
TTC3P1-201ENST00000399586 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
TTC3P1-201ENST00000399586 PCMTD1Q96MG8 357 aaPredicted RBP10.17□□□□□ -0.78
TTC3P1-201ENST00000399586 SPAG9O60271 1321 aaKnown RBP10.16□□□□□ -0.78
TTC3P1-201ENST00000399586 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
TTC3P1-201ENST00000399586 TSR1Q2NL82 804 aaKnown RBP10.16□□□□□ -0.78
TTC3P1-201ENST00000399586 H3BQV1 296 aa10.15□□□□□ -0.78
TTC3P1-201ENST00000399586 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
TTC3P1-201ENST00000399586 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.78
TTC3P1-201ENST00000399586 MEX3CQ5U5Q3 659 aaKnown RBP10.15□□□□□ -0.78
TTC3P1-201ENST00000399586 AKAP17AQ02040 695 aaKnown RBP10.14□□□□□ -0.79
TTC3P1-201ENST00000399586 TPM2P07951 284 aa10.14□□□□□ -0.79
TTC3P1-201ENST00000399586 KIF16BQ96L93 1317 aa10.13□□□□□ -0.79
TTC3P1-201ENST00000399586 CLIP1P30622 1438 aa10.13□□□□□ -0.79
TTC3P1-201ENST00000399586 EVA1CP58658 441 aa10.13□□□□□ -0.79
TTC3P1-201ENST00000399586 RWDD1Q9H446 243 aaPredicted RBP10.13□□□□□ -0.79
TTC3P1-201ENST00000399586 NGDNQ8NEJ9 315 aaKnown RBP10.13□□□□□ -0.79
TTC3P1-201ENST00000399586 CLUAP1Q96AJ1 413 aa10.13□□□□□ -0.79
TTC3P1-201ENST00000399586 CALD1Q05682 793 aaKnown RBP10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 CSPP1Q1MSJ5 1256 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 SMC4Q9NTJ3 1288 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 PTMSP20962 102 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 MCTP1Q6DN14 999 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 CALRP27797 417 aaKnown RBP10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 AMPHP49418 695 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 RILPL2Q969X0 211 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 USP35Q9P2H5 1018 aa10.12□□□□□ -0.79
TTC3P1-201ENST00000399586 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms