RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ACIN1Q9UKV3 1341 aaKnown RBP37.35■■■■□ 3.57
SHARPIN-202ENST00000398712 ZNF644Q9H582 1327 aaPredicted RBP37.34■■■■□ 3.57
SHARPIN-202ENST00000398712 SIN3AQ96ST3 1273 aa37.34■■■■□ 3.57
SHARPIN-202ENST00000398712 ABCC10Q5T3U5 1492 aa37.34■■■■□ 3.57
SHARPIN-202ENST00000398712 CDC42BPAQ5VT25 1732 aa37.33■■■■□ 3.57
SHARPIN-202ENST00000398712 NEUROD1Q13562 356 aa37.3■■■■□ 3.56
SHARPIN-202ENST00000398712 ERCC6L2Q5T890 1561 aa37.29■■■■□ 3.56
SHARPIN-202ENST00000398712 KDM6BO15054 1643 aa37.28■■■■□ 3.56
SHARPIN-202ENST00000398712 CROCC2H7BZ55 1655 aa37.26■■■■□ 3.55
SHARPIN-202ENST00000398712 ADGBQ8N7X0 1667 aa37.26■■■■□ 3.55
SHARPIN-202ENST00000398712 ABCC2Q92887 1545 aa37.25■■■■□ 3.55
SHARPIN-202ENST00000398712 OSCARQ8IYS5 282 aa37.25■■■■□ 3.55
SHARPIN-202ENST00000398712 ZNF777Q9ULD5 760 aaPredicted RBP37.17■■■■□ 3.54
SHARPIN-202ENST00000398712 TRIM52Q96A61 297 aa37.17■■■■□ 3.54
SHARPIN-202ENST00000398712 ADGRL2O95490 1459 aa37.16■■■■□ 3.54
SHARPIN-202ENST00000398712 TONSLQ96HA7 1378 aa37.12■■■■□ 3.53
SHARPIN-202ENST00000398712 NCOA1Q15788 1441 aa37.1■■■■□ 3.53
SHARPIN-202ENST00000398712 PREX2Q70Z35 1606 aa37.1■■■■□ 3.53
SHARPIN-202ENST00000398712 UHRF1BP1LA0JNW5 1464 aa37.09■■■■□ 3.53
SHARPIN-202ENST00000398712 SHANK2Q9UPX8 1470 aa37.09■■■■□ 3.53
SHARPIN-202ENST00000398712 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
SHARPIN-202ENST00000398712 DENND4BO75064 1496 aaPredicted RBP37.07■■■■□ 3.52
SHARPIN-202ENST00000398712 PPP1R15AO75807 674 aaPredicted RBP37.06■■■■□ 3.52
SHARPIN-202ENST00000398712 ANKRD30AQ9BXX3 1397 aa37.05■■■■□ 3.52
SHARPIN-202ENST00000398712 MPHOSPH9Q99550 1183 aa37.04■■■■□ 3.52
SHARPIN-202ENST00000398712 CDC42BPBQ9Y5S2 1711 aa37.04■■■■□ 3.52
SHARPIN-202ENST00000398712 ARHGEF5Q12774 1597 aa37.03■■■■□ 3.52
SHARPIN-202ENST00000398712 ZCCHC11Q5TAX3 1644 aaKnown RBP36.99■■■■□ 3.51
SHARPIN-202ENST00000398712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.96■■■■□ 3.51
SHARPIN-202ENST00000398712 TTC37Q6PGP7 1564 aa36.96■■■■□ 3.51
SHARPIN-202ENST00000398712 KDM5BQ9UGL1 1544 aa36.96■■■■□ 3.51
SHARPIN-202ENST00000398712 C9orf84Q5VXU9 1444 aa36.96■■■■□ 3.51
SHARPIN-202ENST00000398712 SAMD9LQ8IVG5 1584 aa36.95■■■■□ 3.51
SHARPIN-202ENST00000398712 MYO5CQ9NQX4 1742 aa36.93■■■■□ 3.5
SHARPIN-202ENST00000398712 MIER1Q8N108 512 aa36.91■■■■□ 3.5
SHARPIN-202ENST00000398712 MBD5Q9P267 1494 aa36.9■■■■□ 3.5
SHARPIN-202ENST00000398712 TSPY4P0CV99 314 aa36.9■■■■□ 3.5
SHARPIN-202ENST00000398712 TSPY10P0CW01 314 aa36.9■■■■□ 3.5
SHARPIN-202ENST00000398712 RSPH4AQ5TD94 716 aa36.88■■■■□ 3.49
SHARPIN-202ENST00000398712 CCDC141Q6ZP82 1450 aa36.88■■■■□ 3.49
SHARPIN-202ENST00000398712 ARHGAP5Q13017 1502 aa36.87■■■■□ 3.49
SHARPIN-202ENST00000398712 ANKRD50Q9ULJ7 1429 aa36.86■■■■□ 3.49
SHARPIN-202ENST00000398712 SLC4A1APQ9BWU0 796 aaKnown RBP36.83■■■■□ 3.49
SHARPIN-202ENST00000398712 PZPP20742 1482 aa36.83■■■■□ 3.49
SHARPIN-202ENST00000398712 HNRNPMP52272 730 aaKnown RBP eCLIP36.83■■■■□ 3.49
SHARPIN-202ENST00000398712 ANKRD30BQ9BXX2 1392 aa36.82■■■■□ 3.48
SHARPIN-202ENST00000398712 PLEKHH2Q8IVE3 1493 aa36.81■■■■□ 3.48
SHARPIN-202ENST00000398712 SYCP2Q9BX26 1530 aa36.77■■■■□ 3.48
SHARPIN-202ENST00000398712 MAST1Q9Y2H9 1570 aa36.76■■■■□ 3.47
SHARPIN-202ENST00000398712 KIAA1107Q9UPP5 1409 aa36.75■■■■□ 3.47
SHARPIN-202ENST00000398712 RPRD2Q5VT52 1461 aaKnown RBP36.75■■■■□ 3.47
SHARPIN-202ENST00000398712 KIF15Q9NS87 1388 aa36.74■■■■□ 3.47
SHARPIN-202ENST00000398712 FOXD1Q16676 465 aa36.73■■■■□ 3.47
SHARPIN-202ENST00000398712 KCNH8Q96L42 1107 aa36.73■■■■□ 3.47
SHARPIN-202ENST00000398712 PLCH2O75038 1416 aa36.72■■■■□ 3.47
SHARPIN-202ENST00000398712 CENPBP07199 599 aaPredicted RBP36.71■■■■□ 3.47
SHARPIN-202ENST00000398712 KDM5DQ9BY66 1539 aa36.69■■■■□ 3.46
SHARPIN-202ENST00000398712 RIMBP3CA6NJZ7 1639 aa36.64■■■■□ 3.46
SHARPIN-202ENST00000398712 RIMBP3BA6NNM3 1639 aa36.64■■■■□ 3.46
SHARPIN-202ENST00000398712 RIMBP3Q9UFD9 1639 aa36.64■■■■□ 3.46
SHARPIN-202ENST00000398712 ARAP3Q8WWN8 1544 aa36.62■■■■□ 3.45
SHARPIN-202ENST00000398712 PLXNC1O60486 1568 aa36.61■■■■□ 3.45
SHARPIN-202ENST00000398712 WDR7Q9Y4E6 1490 aa36.61■■■■□ 3.45
SHARPIN-202ENST00000398712 EFCAB2Q5VUJ9 269 aa36.61■■■■□ 3.45
SHARPIN-202ENST00000398712 NUP155O75694 1391 aa36.6■■■■□ 3.45
SHARPIN-202ENST00000398712 L3MBTL2Q969R5 705 aa36.59■■■■□ 3.45
SHARPIN-202ENST00000398712 TEX14Q8IWB6 1497 aa36.58■■■■□ 3.45
SHARPIN-202ENST00000398712 PKD2Q13563 968 aa36.56■■■■□ 3.44
SHARPIN-202ENST00000398712 ABCC1P33527 1531 aa36.56■■■■□ 3.44
SHARPIN-202ENST00000398712 ARHGEF12Q9NZN5 1544 aa36.53■■■■□ 3.44
SHARPIN-202ENST00000398712 ABCA9Q8IUA7 1624 aa36.48■■■■□ 3.43
SHARPIN-202ENST00000398712 UNC13BO14795 1591 aa36.47■■■■□ 3.43
SHARPIN-202ENST00000398712 HIRIP3Q9BW71 556 aaPredicted RBP36.46■■■■□ 3.43
SHARPIN-202ENST00000398712 DUOX2Q9NRD8 1548 aa36.46■■■■□ 3.43
SHARPIN-202ENST00000398712 DDX10Q13206 875 aaKnown RBP36.44■■■■□ 3.42
SHARPIN-202ENST00000398712 YTHDC1Q96MU7 727 aaKnown RBP36.43■■■■□ 3.42
SHARPIN-202ENST00000398712 FAM135AQ9P2D6 1515 aa36.42■■■■□ 3.42
SHARPIN-202ENST00000398712 ASXL2Q76L83 1435 aa36.4■■■■□ 3.42
SHARPIN-202ENST00000398712 ERBINQ96RT1 1412 aa36.38■■■■□ 3.41
SHARPIN-202ENST00000398712 TRAPPC8Q9Y2L5 1435 aa36.36■■■■□ 3.41
SHARPIN-202ENST00000398712 EIF4G2P78344 907 aaKnown RBP eCLIP36.35■■■■□ 3.41
SHARPIN-202ENST00000398712 RTEL1-TNFRSF6BF6WH68 1400 aa36.33■■■■□ 3.41
SHARPIN-202ENST00000398712 HSPA5P11021 654 aaKnown RBP36.32■■■■□ 3.41
SHARPIN-202ENST00000398712 IQGAP3Q86VI3 1631 aa36.32■■■■□ 3.41
SHARPIN-202ENST00000398712 FANCAO15360 1455 aa36.32■■■■□ 3.41
SHARPIN-202ENST00000398712 NPM1P06748 294 aaKnown RBP eCLIP36.32■■■■□ 3.4
SHARPIN-202ENST00000398712 CYB5RLQ6IPT4 315 aa36.32■■■■□ 3.4
SHARPIN-202ENST00000398712 NBPF8Q3BBV2 869 aa36.31■■■■□ 3.4
SHARPIN-202ENST00000398712 MAGI2Q86UL8 1455 aa36.29■■■■□ 3.4
SHARPIN-202ENST00000398712 SPAG9O60271 1321 aaKnown RBP36.27■■■■□ 3.4
SHARPIN-202ENST00000398712 ZFYVE16Q7Z3T8 1539 aa36.26■■■■□ 3.4
SHARPIN-202ENST00000398712 SCAF1Q9H7N4 1312 aaKnown RBP36.26■■■■□ 3.4
SHARPIN-202ENST00000398712 ADGRL1O94910 1474 aa36.19■■■■□ 3.38
SHARPIN-202ENST00000398712 INO80Q9ULG1 1556 aaPredicted RBP36.19■■■■□ 3.38
SHARPIN-202ENST00000398712 UHRF1BP1Q6BDS2 1440 aa36.18■■■■□ 3.38
SHARPIN-202ENST00000398712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.17■■■■□ 3.381e-6■□□□□ 10.5
SHARPIN-202ENST00000398712 AFAP1Q8N556 730 aa36.17■■■■□ 3.38
SHARPIN-202ENST00000398712 ATP7AQ04656 1500 aa36.16■■■■□ 3.38
SHARPIN-202ENST00000398712 CCDC144AA2RUR9 1427 aa36.13■■■■□ 3.37
SHARPIN-202ENST00000398712 SCAPERQ9BY12 1400 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms