RNA–Protein interactions for RNA: ENST00000398647.7

FAM3B-203, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM3B, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-203ENST00000398647 ARHGEF12Q9NZN5 1544 aa23.61■■□□□ 1.37
FAM3B-203ENST00000398647 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
FAM3B-203ENST00000398647 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
FAM3B-203ENST00000398647 MLECQ14165 292 aa23.6■■□□□ 1.37
FAM3B-203ENST00000398647 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
FAM3B-203ENST00000398647 DMRT2Q9Y5R5 561 aa23.54■■□□□ 1.36
FAM3B-203ENST00000398647 ATP10AO60312 1499 aa23.53■■□□□ 1.36
FAM3B-203ENST00000398647 C9orf84Q5VXU9 1444 aa23.52■■□□□ 1.36
FAM3B-203ENST00000398647 SCAPERQ9BY12 1400 aa23.51■■□□□ 1.35
FAM3B-203ENST00000398647 UHRF1BP1Q6BDS2 1440 aa23.48■■□□□ 1.35
FAM3B-203ENST00000398647 PLCH2O75038 1416 aa23.47■■□□□ 1.35
FAM3B-203ENST00000398647 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
FAM3B-203ENST00000398647 CEBPAP49715 358 aaPredicted RBP23.46■■□□□ 1.35
FAM3B-203ENST00000398647 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
FAM3B-203ENST00000398647 CDK13Q14004 1512 aaKnown RBP23.43■■□□□ 1.34
FAM3B-203ENST00000398647 PTPRTO14522 1441 aa23.43■■□□□ 1.34
FAM3B-203ENST00000398647 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
FAM3B-203ENST00000398647 C3P01024 1663 aa23.41■■□□□ 1.34
FAM3B-203ENST00000398647 IQSEC2Q5JU85 1478 aa23.4■■□□□ 1.34
FAM3B-203ENST00000398647 LTBP4Q8N2S1 1624 aa23.4■■□□□ 1.34
FAM3B-203ENST00000398647 ZNF518AQ6AHZ1 1483 aa23.38■■□□□ 1.33
FAM3B-203ENST00000398647 KDM5CP41229 1560 aa23.38■■□□□ 1.33
FAM3B-203ENST00000398647 REREQ9P2R6 1566 aa23.37■■□□□ 1.33
FAM3B-203ENST00000398647 DIP2CQ9Y2E4 1556 aa23.35■■□□□ 1.33
FAM3B-203ENST00000398647 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
FAM3B-203ENST00000398647 KIF14Q15058 1648 aa23.3■■□□□ 1.32
FAM3B-203ENST00000398647 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
FAM3B-203ENST00000398647 EEA1Q15075 1411 aa23.28■■□□□ 1.32
FAM3B-203ENST00000398647 NCOA1Q15788 1441 aa23.28■■□□□ 1.32
FAM3B-203ENST00000398647 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
FAM3B-203ENST00000398647 TRAPPC8Q9Y2L5 1435 aa23.26■■□□□ 1.31
FAM3B-203ENST00000398647 AGLP35573 1532 aa23.26■■□□□ 1.31
FAM3B-203ENST00000398647 AFAP1Q8N556 730 aa23.25■■□□□ 1.31
FAM3B-203ENST00000398647 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
FAM3B-203ENST00000398647 CDC42BPBQ9Y5S2 1711 aa23.22■■□□□ 1.31
FAM3B-203ENST00000398647 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
FAM3B-203ENST00000398647 ESF1Q9H501 851 aaKnown RBP23.21■■□□□ 1.31
FAM3B-203ENST00000398647 CAMSAP1Q5T5Y3 1602 aa23.2■■□□□ 1.3
FAM3B-203ENST00000398647 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
FAM3B-203ENST00000398647 CNTLNQ9NXG0 1405 aa23.19■■□□□ 1.3
FAM3B-203ENST00000398647 MROH2AA6NES4 1674 aa23.19■■□□□ 1.3
FAM3B-203ENST00000398647 TROQ12816 1431 aaPredicted RBP23.18■■□□□ 1.3
FAM3B-203ENST00000398647 FMN1Q68DA7 1419 aa23.18■■□□□ 1.3
FAM3B-203ENST00000398647 ITSN2Q9NZM3 1697 aa23.18■■□□□ 1.3
FAM3B-203ENST00000398647 ABCC1P33527 1531 aa23.16■■□□□ 1.3
FAM3B-203ENST00000398647 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
FAM3B-203ENST00000398647 CLIP1P30622 1438 aa23.16■■□□□ 1.3
FAM3B-203ENST00000398647 PREX2Q70Z35 1606 aa23.15■■□□□ 1.3
FAM3B-203ENST00000398647 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
FAM3B-203ENST00000398647 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
FAM3B-203ENST00000398647 NPATQ14207 1427 aa23.15■■□□□ 1.3
FAM3B-203ENST00000398647 SUPT6HQ7KZ85 1726 aaKnown RBP23.13■■□□□ 1.29
FAM3B-203ENST00000398647 ZNF142P52746 1687 aaPredicted RBP23.12■■□□□ 1.29
FAM3B-203ENST00000398647 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
FAM3B-203ENST00000398647 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
FAM3B-203ENST00000398647 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.29
FAM3B-203ENST00000398647 PLA2R1Q13018 1463 aa23.06■■□□□ 1.28
FAM3B-203ENST00000398647 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
FAM3B-203ENST00000398647 NCKAP5LQ9HCH0 1330 aa23.06■■□□□ 1.28
FAM3B-203ENST00000398647 CDC42BPAQ5VT25 1732 aa23.05■■□□□ 1.28
FAM3B-203ENST00000398647 CLTCQ00610 1675 aaKnown RBP23.04■■□□□ 1.28
FAM3B-203ENST00000398647 MED1Q15648 1581 aaPredicted RBP23.03■■□□□ 1.28
FAM3B-203ENST00000398647 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
FAM3B-203ENST00000398647 ZMYM3Q14202 1370 aa23.02■■□□□ 1.28
FAM3B-203ENST00000398647 TCOF1Q13428 1488 aaKnown RBP23.02■■□□□ 1.28
FAM3B-203ENST00000398647 PKD2Q13563 968 aa23.01■■□□□ 1.27
FAM3B-203ENST00000398647 SAMD9LQ8IVG5 1584 aa23.01■■□□□ 1.27
FAM3B-203ENST00000398647 PLXNC1O60486 1568 aa22.95■■□□□ 1.26
FAM3B-203ENST00000398647 PTPRKQ15262 1439 aa22.94■■□□□ 1.26
FAM3B-203ENST00000398647 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
FAM3B-203ENST00000398647 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
FAM3B-203ENST00000398647 POLR1AO95602 1720 aaPredicted RBP22.93■■□□□ 1.26
FAM3B-203ENST00000398647 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
FAM3B-203ENST00000398647 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
FAM3B-203ENST00000398647 ATP7AQ04656 1500 aa22.92■■□□□ 1.26
FAM3B-203ENST00000398647 HSPA1LP34931 641 aa22.91■■□□□ 1.26
FAM3B-203ENST00000398647 INO80Q9ULG1 1556 aaPredicted RBP22.91■■□□□ 1.26
FAM3B-203ENST00000398647 CPS1P31327 1500 aa22.89■■□□□ 1.26
FAM3B-203ENST00000398647 SPAG9O60271 1321 aaKnown RBP22.88■■□□□ 1.25
FAM3B-203ENST00000398647 DNMT1P26358 1616 aaKnown RBP22.88■■□□□ 1.25
FAM3B-203ENST00000398647 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
FAM3B-203ENST00000398647 A2MP01023 1474 aa22.87■■□□□ 1.25
FAM3B-203ENST00000398647 A2ML1A8K2U0 1454 aa22.86■■□□□ 1.25
FAM3B-203ENST00000398647 CASKIN1Q8WXD9 1431 aa22.85■■□□□ 1.25
FAM3B-203ENST00000398647 TOM1O60784 492 aa22.85■■□□□ 1.25
FAM3B-203ENST00000398647 PIP4K2BP78356 416 aa22.85■■□□□ 1.25
FAM3B-203ENST00000398647 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
FAM3B-203ENST00000398647 ADGBQ8N7X0 1667 aa22.84■■□□□ 1.25
FAM3B-203ENST00000398647 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
FAM3B-203ENST00000398647 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
FAM3B-203ENST00000398647 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
FAM3B-203ENST00000398647 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
FAM3B-203ENST00000398647 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
FAM3B-203ENST00000398647 KIAA1107Q9UPP5 1409 aa22.8■■□□□ 1.24
FAM3B-203ENST00000398647 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.24
FAM3B-203ENST00000398647 GGT6Q6P531 493 aa22.79■■□□□ 1.24
FAM3B-203ENST00000398647 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
FAM3B-203ENST00000398647 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
FAM3B-203ENST00000398647 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
FAM3B-203ENST00000398647 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms