RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.62
SEC13-206ENST00000397102 CERKQ8TCT0 537 aa25.19■■□□□ 1.62
SEC13-206ENST00000397102 MLECQ14165 292 aa25.18■■□□□ 1.62
SEC13-206ENST00000397102 ARHGEF12Q9NZN5 1544 aa25.17■■□□□ 1.62
SEC13-206ENST00000397102 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
SEC13-206ENST00000397102 ATP10AO60312 1499 aa25.15■■□□□ 1.62
SEC13-206ENST00000397102 MYO5CQ9NQX4 1742 aa25.15■■□□□ 1.62
SEC13-206ENST00000397102 C9orf84Q5VXU9 1444 aa25.14■■□□□ 1.62
SEC13-206ENST00000397102 EFCAB2Q5VUJ9 269 aa25.07■■□□□ 1.6
SEC13-206ENST00000397102 ZNF518AQ6AHZ1 1483 aa25.05■■□□□ 1.6
SEC13-206ENST00000397102 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
SEC13-206ENST00000397102 STRCQ7RTU9 1775 aa25.04■■□□□ 1.6
SEC13-206ENST00000397102 KDM5CP41229 1560 aa25.04■■□□□ 1.6
SEC13-206ENST00000397102 KIF14Q15058 1648 aa25.04■■□□□ 1.6
SEC13-206ENST00000397102 CEBPAP49715 358 aaPredicted RBP25.01■■□□□ 1.59
SEC13-206ENST00000397102 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
SEC13-206ENST00000397102 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
SEC13-206ENST00000397102 DMRT2Q9Y5R5 561 aa25■■□□□ 1.59
SEC13-206ENST00000397102 UHRF1BP1Q6BDS2 1440 aa25■■□□□ 1.59
SEC13-206ENST00000397102 ARHGAP5Q13017 1502 aa24.99■■□□□ 1.59
SEC13-206ENST00000397102 REREQ9P2R6 1566 aa24.98■■□□□ 1.59
SEC13-206ENST00000397102 DIP2CQ9Y2E4 1556 aa24.98■■□□□ 1.59
SEC13-206ENST00000397102 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
SEC13-206ENST00000397102 TROQ12816 1431 aaPredicted RBP24.97■■□□□ 1.59
SEC13-206ENST00000397102 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
SEC13-206ENST00000397102 AFAP1Q8N556 730 aa24.94■■□□□ 1.58
SEC13-206ENST00000397102 CLIP1P30622 1438 aa24.94■■□□□ 1.58
SEC13-206ENST00000397102 C3P01024 1663 aa24.93■■□□□ 1.58
SEC13-206ENST00000397102 ABCA6Q8N139 1617 aa24.93■■□□□ 1.58
SEC13-206ENST00000397102 LRRIQ1Q96JM4 1722 aa24.92■■□□□ 1.58
SEC13-206ENST00000397102 CDC42BPBQ9Y5S2 1711 aa24.92■■□□□ 1.58
SEC13-206ENST00000397102 MLH3Q9UHC1 1453 aa24.9■■□□□ 1.58
SEC13-206ENST00000397102 MYT1LQ9UL68 1186 aa24.9■■□□□ 1.58
SEC13-206ENST00000397102 DISP3Q9P2K9 1392 aa24.9■■□□□ 1.58
SEC13-206ENST00000397102 PTPRTO14522 1441 aa24.89■■□□□ 1.58
SEC13-206ENST00000397102 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.58
SEC13-206ENST00000397102 AGLP35573 1532 aa24.89■■□□□ 1.57
SEC13-206ENST00000397102 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
SEC13-206ENST00000397102 ABCC1P33527 1531 aa24.86■■□□□ 1.57
SEC13-206ENST00000397102 ITSN2Q9NZM3 1697 aa24.85■■□□□ 1.57
SEC13-206ENST00000397102 ILDR2Q71H61 639 aa24.83■■□□□ 1.57
SEC13-206ENST00000397102 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
SEC13-206ENST00000397102 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
SEC13-206ENST00000397102 ESF1Q9H501 851 aaKnown RBP24.81■■□□□ 1.56
SEC13-206ENST00000397102 KIDINS220Q9ULH0 1771 aa24.8■■□□□ 1.56
SEC13-206ENST00000397102 LTBP4Q8N2S1 1624 aa24.8■■□□□ 1.56
SEC13-206ENST00000397102 CNTLNQ9NXG0 1405 aa24.79■■□□□ 1.56
SEC13-206ENST00000397102 SOCS7O14512 581 aa24.79■■□□□ 1.56
SEC13-206ENST00000397102 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
SEC13-206ENST00000397102 IQSEC2Q5JU85 1478 aa24.78■■□□□ 1.56
SEC13-206ENST00000397102 NCOA1Q15788 1441 aa24.77■■□□□ 1.56
SEC13-206ENST00000397102 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
SEC13-206ENST00000397102 CDC42BPAQ5VT25 1732 aa24.75■■□□□ 1.55
SEC13-206ENST00000397102 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
SEC13-206ENST00000397102 CASKIN1Q8WXD9 1431 aa24.71■■□□□ 1.55
SEC13-206ENST00000397102 NPATQ14207 1427 aa24.7■■□□□ 1.55
SEC13-206ENST00000397102 SAMD9LQ8IVG5 1584 aa24.7■■□□□ 1.54
SEC13-206ENST00000397102 CAMSAP1Q5T5Y3 1602 aa24.69■■□□□ 1.54
SEC13-206ENST00000397102 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.54
SEC13-206ENST00000397102 SYCP2Q9BX26 1530 aa24.64■■□□□ 1.53
SEC13-206ENST00000397102 ZMYM3Q14202 1370 aa24.63■■□□□ 1.53
SEC13-206ENST00000397102 ZNF142P52746 1687 aaPredicted RBP24.62■■□□□ 1.53
SEC13-206ENST00000397102 CLTCQ00610 1675 aaKnown RBP24.61■■□□□ 1.53
SEC13-206ENST00000397102 MYO3AQ8NEV4 1616 aa24.61■■□□□ 1.53
SEC13-206ENST00000397102 FYCO1Q9BQS8 1478 aa24.6■■□□□ 1.53
SEC13-206ENST00000397102 ATP7AQ04656 1500 aa24.59■■□□□ 1.53
SEC13-206ENST00000397102 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
SEC13-206ENST00000397102 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
SEC13-206ENST00000397102 GPATCH8Q9UKJ3 1502 aaKnown RBP24.58■■□□□ 1.53
SEC13-206ENST00000397102 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.53
SEC13-206ENST00000397102 INO80Q9ULG1 1556 aaPredicted RBP24.58■■□□□ 1.52
SEC13-206ENST00000397102 PLA2R1Q13018 1463 aa24.58■■□□□ 1.52
SEC13-206ENST00000397102 NCKAP5LQ9HCH0 1330 aa24.56■■□□□ 1.52
SEC13-206ENST00000397102 CEP170BQ9Y4F5 1589 aaPredicted RBP24.55■■□□□ 1.52
SEC13-206ENST00000397102 ZNF335Q9H4Z2 1342 aaPredicted RBP24.55■■□□□ 1.52
SEC13-206ENST00000397102 KIAA1107Q9UPP5 1409 aa24.54■■□□□ 1.52
SEC13-206ENST00000397102 A2MP01023 1474 aa24.54■■□□□ 1.52
SEC13-206ENST00000397102 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
SEC13-206ENST00000397102 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
SEC13-206ENST00000397102 HNRNPMP52272 730 aaKnown RBP eCLIP24.53■■□□□ 1.52
SEC13-206ENST00000397102 PKD2Q13563 968 aa24.53■■□□□ 1.52
SEC13-206ENST00000397102 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
SEC13-206ENST00000397102 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
SEC13-206ENST00000397102 UBAP1LF5GYI3 381 aa24.49■■□□□ 1.51
SEC13-206ENST00000397102 ADGBQ8N7X0 1667 aa24.49■■□□□ 1.51
SEC13-206ENST00000397102 CFDP1Q9UEE9 299 aaPredicted RBP24.47■■□□□ 1.51
SEC13-206ENST00000397102 CCNB3Q8WWL7 1395 aa24.45■■□□□ 1.5
SEC13-206ENST00000397102 GGT6Q6P531 493 aa24.45■■□□□ 1.5
SEC13-206ENST00000397102 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
SEC13-206ENST00000397102 A2ML1A8K2U0 1454 aa24.42■■□□□ 1.5
SEC13-206ENST00000397102 DNMT1P26358 1616 aaKnown RBP24.41■■□□□ 1.5
SEC13-206ENST00000397102 POLR1AO95602 1720 aaPredicted RBP24.39■■□□□ 1.5
SEC13-206ENST00000397102 MTUS2Q5JR59 1369 aa24.37■■□□□ 1.49
SEC13-206ENST00000397102 TIAM1Q13009 1591 aa24.36■■□□□ 1.49
SEC13-206ENST00000397102 MBD5Q9P267 1494 aa24.35■■□□□ 1.49
SEC13-206ENST00000397102 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
SEC13-206ENST00000397102 CPS1P31327 1500 aa24.34■■□□□ 1.49
SEC13-206ENST00000397102 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
SEC13-206ENST00000397102 DHX29Q7Z478 1369 aaKnown RBP24.31■■□□□ 1.48
SEC13-206ENST00000397102 FAM135AQ9P2D6 1515 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms