RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 ERCC6Q03468 1493 aa19.77■□□□□ 0.75
SPOCK1-202ENST00000394945 NRDCO43847 1150 aa19.76■□□□□ 0.75
SPOCK1-202ENST00000394945 GOLGA6L6A8MZA4 724 aa19.75■□□□□ 0.75
SPOCK1-202ENST00000394945 MAPK8IP3Q9UPT6 1336 aa19.75■□□□□ 0.75
SPOCK1-202ENST00000394945 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
SPOCK1-202ENST00000394945 GOLGA6L4A6NEF3 574 aa19.71■□□□□ 0.75
SPOCK1-202ENST00000394945 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
SPOCK1-202ENST00000394945 DRC7Q8IY82 874 aa19.71■□□□□ 0.75
SPOCK1-202ENST00000394945 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
SPOCK1-202ENST00000394945 IL27Q8NEV9 243 aa19.71■□□□□ 0.74
SPOCK1-202ENST00000394945 CUX2O14529 1486 aa19.7■□□□□ 0.74
SPOCK1-202ENST00000394945 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
SPOCK1-202ENST00000394945 RALBP1Q15311 655 aa19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 TMF1P82094 1093 aa19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 KTN1Q86UP2 1357 aaKnown RBP19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 WIZO95785 1651 aa19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 DCAF11Q8TEB1 546 aa19.69■□□□□ 0.74
SPOCK1-202ENST00000394945 ESF1Q9H501 851 aaKnown RBP19.68■□□□□ 0.74
SPOCK1-202ENST00000394945 TNNT3P45378 269 aaPredicted RBP19.68■□□□□ 0.74
SPOCK1-202ENST00000394945 CALD1Q05682 793 aaKnown RBP19.68■□□□□ 0.74
SPOCK1-202ENST00000394945 FAM161AQ3B820 660 aa19.68■□□□□ 0.74
SPOCK1-202ENST00000394945 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
SPOCK1-202ENST00000394945 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
SPOCK1-202ENST00000394945 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
SPOCK1-202ENST00000394945 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SPOCK1-202ENST00000394945 PKNOX2Q96KN3 472 aa19.64■□□□□ 0.73
SPOCK1-202ENST00000394945 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
SPOCK1-202ENST00000394945 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
SPOCK1-202ENST00000394945 U2SURPO15042 1029 aaKnown RBP19.62■□□□□ 0.73
SPOCK1-202ENST00000394945 FOXD1Q16676 465 aa19.62■□□□□ 0.73
SPOCK1-202ENST00000394945 PMFBP1Q8TBY8 1022 aa19.62■□□□□ 0.73
SPOCK1-202ENST00000394945 NFKBIBQ15653 356 aa19.62■□□□□ 0.73
SPOCK1-202ENST00000394945 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
SPOCK1-202ENST00000394945 BRPF3Q9ULD4 1205 aa19.62■□□□□ 0.73
SPOCK1-202ENST00000394945 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
SPOCK1-202ENST00000394945 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
SPOCK1-202ENST00000394945 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
SPOCK1-202ENST00000394945 RRP1P56182 461 aaKnown RBP19.6■□□□□ 0.73
SPOCK1-202ENST00000394945 MCCP23508 829 aa19.6■□□□□ 0.73
SPOCK1-202ENST00000394945 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
SPOCK1-202ENST00000394945 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
SPOCK1-202ENST00000394945 NLRP13Q86W25 1043 aa19.58■□□□□ 0.73
SPOCK1-202ENST00000394945 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.72
SPOCK1-202ENST00000394945 KCNJ4P48050 445 aa19.58■□□□□ 0.72
SPOCK1-202ENST00000394945 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
SPOCK1-202ENST00000394945 FOXD4L1Q9NU39 408 aa19.58■□□□□ 0.72
SPOCK1-202ENST00000394945 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
SPOCK1-202ENST00000394945 L3MBTL2Q969R5 705 aa19.57■□□□□ 0.72
SPOCK1-202ENST00000394945 PLIN1O60240 522 aa19.57■□□□□ 0.72
SPOCK1-202ENST00000394945 FAM13BQ9NYF5 915 aa19.57■□□□□ 0.72
SPOCK1-202ENST00000394945 FGD1P98174 961 aa19.56■□□□□ 0.72
SPOCK1-202ENST00000394945 MPHOSPH9Q99550 1183 aa19.54■□□□□ 0.72
SPOCK1-202ENST00000394945 DDX49Q9Y6V7 483 aaKnown RBP19.54■□□□□ 0.72
SPOCK1-202ENST00000394945 IPO8O15397 1037 aaKnown RBP19.53■□□□□ 0.72
SPOCK1-202ENST00000394945 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
SPOCK1-202ENST00000394945 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
SPOCK1-202ENST00000394945 FAM43AQ8N2R8 423 aa19.53■□□□□ 0.72
SPOCK1-202ENST00000394945 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
SPOCK1-202ENST00000394945 CRBNQ96SW2 442 aa19.52■□□□□ 0.72
SPOCK1-202ENST00000394945 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
SPOCK1-202ENST00000394945 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
SPOCK1-202ENST00000394945 SKOR2Q2VWA4 1001 aaPredicted RBP19.51■□□□□ 0.71
SPOCK1-202ENST00000394945 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
SPOCK1-202ENST00000394945 MORC1Q86VD1 984 aa19.5■□□□□ 0.71
SPOCK1-202ENST00000394945 APBB1O00213 710 aa19.49■□□□□ 0.71
SPOCK1-202ENST00000394945 PKD2Q13563 968 aa19.49■□□□□ 0.71
SPOCK1-202ENST00000394945 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
SPOCK1-202ENST00000394945 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
SPOCK1-202ENST00000394945 CENPJQ9HC77 1338 aaPredicted RBP19.46■□□□□ 0.71
SPOCK1-202ENST00000394945 NAP1L2Q9ULW6 460 aaPredicted RBP19.45■□□□□ 0.7
SPOCK1-202ENST00000394945 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
SPOCK1-202ENST00000394945 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
SPOCK1-202ENST00000394945 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.44■□□□□ 0.7
SPOCK1-202ENST00000394945 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
SPOCK1-202ENST00000394945 MSH5O43196 834 aa19.43■□□□□ 0.7
SPOCK1-202ENST00000394945 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
SPOCK1-202ENST00000394945 FMN1Q68DA7 1419 aa19.43■□□□□ 0.7
SPOCK1-202ENST00000394945 A0A0U1RQG5 324 aaPredicted RBP19.42■□□□□ 0.7
SPOCK1-202ENST00000394945 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
SPOCK1-202ENST00000394945 ZNF771Q7L3S4 317 aaPredicted RBP19.41■□□□□ 0.7
SPOCK1-202ENST00000394945 PHF14O94880 888 aa19.41■□□□□ 0.7
SPOCK1-202ENST00000394945 CCDC146Q8IYE0 955 aa19.4■□□□□ 0.7
SPOCK1-202ENST00000394945 SMC4Q9NTJ3 1288 aa19.4■□□□□ 0.7
SPOCK1-202ENST00000394945 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.7
SPOCK1-202ENST00000394945 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.7
SPOCK1-202ENST00000394945 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.7
SPOCK1-202ENST00000394945 PHLDB1Q86UU1 1377 aa19.39■□□□□ 0.69
SPOCK1-202ENST00000394945 KIF15Q9NS87 1388 aa19.39■□□□□ 0.69
SPOCK1-202ENST00000394945 MRE11P49959 708 aa19.39■□□□□ 0.69
SPOCK1-202ENST00000394945 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.69
SPOCK1-202ENST00000394945 FOXD4L5Q5VV16 416 aaPredicted RBP19.38■□□□□ 0.69
SPOCK1-202ENST00000394945 FOXD4L4Q8WXT5 416 aaPredicted RBP19.38■□□□□ 0.69
SPOCK1-202ENST00000394945 CSPP1Q1MSJ5 1256 aa19.37■□□□□ 0.69
SPOCK1-202ENST00000394945 ST18O60284 1047 aa19.37■□□□□ 0.69
SPOCK1-202ENST00000394945 MAP7D2Q96T17 732 aa19.36■□□□□ 0.69
SPOCK1-202ENST00000394945 CGNL1Q0VF96 1302 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms