RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
GAPVD1-207ENST00000394105 MAGI1Q96QZ7 1491 aaPredicted RBP11.47□□□□□ -0.57
GAPVD1-207ENST00000394105 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
GAPVD1-207ENST00000394105 DAPK1P53355 1430 aa11.46□□□□□ -0.58
GAPVD1-207ENST00000394105 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
GAPVD1-207ENST00000394105 TTC37Q6PGP7 1564 aa11.44□□□□□ -0.58
GAPVD1-207ENST00000394105 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
GAPVD1-207ENST00000394105 ATP10BO94823 1461 aa11.43□□□□□ -0.58
GAPVD1-207ENST00000394105 HIRIP3Q9BW71 556 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-207ENST00000394105 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
GAPVD1-207ENST00000394105 ADGRL2O95490 1459 aa11.42□□□□□ -0.58
GAPVD1-207ENST00000394105 CAMSAP2Q08AD1 1489 aa11.41□□□□□ -0.58
GAPVD1-207ENST00000394105 E9PCH4 1651 aa11.41□□□□□ -0.58
GAPVD1-207ENST00000394105 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
GAPVD1-207ENST00000394105 PREX2Q70Z35 1606 aa11.4□□□□□ -0.58
GAPVD1-207ENST00000394105 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.59
GAPVD1-207ENST00000394105 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
GAPVD1-207ENST00000394105 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
GAPVD1-207ENST00000394105 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-207ENST00000394105 CLASP1Q7Z460 1538 aa11.38□□□□□ -0.59
GAPVD1-207ENST00000394105 NBPF8Q3BBV2 869 aa11.37□□□□□ -0.59
GAPVD1-207ENST00000394105 KDM5CP41229 1560 aa11.37□□□□□ -0.59
GAPVD1-207ENST00000394105 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
GAPVD1-207ENST00000394105 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
GAPVD1-207ENST00000394105 FOXD1Q16676 465 aa11.37□□□□□ -0.59
GAPVD1-207ENST00000394105 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
GAPVD1-207ENST00000394105 PTPRGP23470 1445 aa11.36□□□□□ -0.59
GAPVD1-207ENST00000394105 PLA2R1Q13018 1463 aa11.36□□□□□ -0.59
GAPVD1-207ENST00000394105 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
GAPVD1-207ENST00000394105 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-207ENST00000394105 MYO5CQ9NQX4 1742 aa11.35□□□□□ -0.59
GAPVD1-207ENST00000394105 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-207ENST00000394105 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
GAPVD1-207ENST00000394105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.59
GAPVD1-207ENST00000394105 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-207ENST00000394105 APLP2Q06481 763 aa11.33□□□□□ -0.6
GAPVD1-207ENST00000394105 ABCC2Q92887 1545 aa11.32□□□□□ -0.6
GAPVD1-207ENST00000394105 ARID3CA6NKF2 412 aa11.31□□□□□ -0.6
GAPVD1-207ENST00000394105 ARHGEF5Q12774 1597 aa11.31□□□□□ -0.6
GAPVD1-207ENST00000394105 UNC13BO14795 1591 aa11.3□□□□□ -0.6
GAPVD1-207ENST00000394105 RRP7BPQ9NSQ0 103 aa11.3□□□□□ -0.6
GAPVD1-207ENST00000394105 MAGI2Q86UL8 1455 aa11.29□□□□□ -0.6
GAPVD1-207ENST00000394105 ZCCHC11Q5TAX3 1644 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-207ENST00000394105 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
GAPVD1-207ENST00000394105 MSH5O43196 834 aa11.28□□□□□ -0.6
GAPVD1-207ENST00000394105 MROH1Q8NDA8 1641 aa11.28□□□□□ -0.6
GAPVD1-207ENST00000394105 MAST1Q9Y2H9 1570 aa11.27□□□□□ -0.61
GAPVD1-207ENST00000394105 CHIC2Q9UKJ5 165 aa11.27□□□□□ -0.61
GAPVD1-207ENST00000394105 DHX29Q7Z478 1369 aaKnown RBP11.27□□□□□ -0.61
GAPVD1-207ENST00000394105 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
GAPVD1-207ENST00000394105 DEPDC5O75140 1603 aa11.24□□□□□ -0.61
GAPVD1-207ENST00000394105 MPHOSPH9Q99550 1183 aa11.24□□□□□ -0.61
GAPVD1-207ENST00000394105 PLXNC1O60486 1568 aa11.23□□□□□ -0.61
GAPVD1-207ENST00000394105 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
GAPVD1-207ENST00000394105 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
GAPVD1-207ENST00000394105 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-207ENST00000394105 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-207ENST00000394105 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
GAPVD1-207ENST00000394105 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
GAPVD1-207ENST00000394105 SYCP2Q9BX26 1530 aa11.22□□□□□ -0.61
GAPVD1-207ENST00000394105 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-207ENST00000394105 ERCC6Q03468 1493 aa11.21□□□□□ -0.62
GAPVD1-207ENST00000394105 UHRF1BP1Q6BDS2 1440 aa11.2□□□□□ -0.62
GAPVD1-207ENST00000394105 MYOM1P52179 1685 aa11.2□□□□□ -0.62
GAPVD1-207ENST00000394105 IFT172Q9UG01 1749 aa11.2□□□□□ -0.62
GAPVD1-207ENST00000394105 VWDEQ8N2E2 1590 aa11.19□□□□□ -0.62
GAPVD1-207ENST00000394105 ABCA9Q8IUA7 1624 aa11.18□□□□□ -0.62
GAPVD1-207ENST00000394105 FAM135AQ9P2D6 1515 aa11.18□□□□□ -0.62
GAPVD1-207ENST00000394105 ABCC1P33527 1531 aa11.16□□□□□ -0.62
GAPVD1-207ENST00000394105 SIGLEC1Q9BZZ2 1709 aa11.16□□□□□ -0.62
GAPVD1-207ENST00000394105 HSPA5P11021 654 aaKnown RBP11.15□□□□□ -0.62
GAPVD1-207ENST00000394105 C9orf84Q5VXU9 1444 aa11.15□□□□□ -0.62
GAPVD1-207ENST00000394105 INO80Q9ULG1 1556 aaPredicted RBP11.15□□□□□ -0.62
GAPVD1-207ENST00000394105 KIAA1107Q9UPP5 1409 aa11.15□□□□□ -0.62
GAPVD1-207ENST00000394105 MROH2AA6NES4 1674 aa11.15□□□□□ -0.63
GAPVD1-207ENST00000394105 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
GAPVD1-207ENST00000394105 LAMC1P11047 1609 aa11.14□□□□□ -0.63
GAPVD1-207ENST00000394105 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
GAPVD1-207ENST00000394105 ZFYVE16Q7Z3T8 1539 aa11.13□□□□□ -0.63
GAPVD1-207ENST00000394105 A2MP01023 1474 aa11.13□□□□□ -0.63
GAPVD1-207ENST00000394105 CEP152O94986 1710 aa11.13□□□□□ -0.63
GAPVD1-207ENST00000394105 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
GAPVD1-207ENST00000394105 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 SPHKAPQ2M3C7 1700 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 ANKRD50Q9ULJ7 1429 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 FRMPD1Q5SYB0 1578 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 CNTLNQ9NXG0 1405 aa11.12□□□□□ -0.63
GAPVD1-207ENST00000394105 PRDM15P57071 1507 aaPredicted RBP11.11□□□□□ -0.63
GAPVD1-207ENST00000394105 ATP10AO60312 1499 aa11.11□□□□□ -0.63
GAPVD1-207ENST00000394105 CLTCL1P53675 1640 aa11.1□□□□□ -0.63
GAPVD1-207ENST00000394105 UHRF1BP1LA0JNW5 1464 aa11.1□□□□□ -0.63
GAPVD1-207ENST00000394105 TRAPPC8Q9Y2L5 1435 aa11.09□□□□□ -0.63
GAPVD1-207ENST00000394105 BCANQ96GW7 911 aa11.09□□□□□ -0.63
GAPVD1-207ENST00000394105 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
GAPVD1-207ENST00000394105 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
GAPVD1-207ENST00000394105 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
GAPVD1-207ENST00000394105 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
GAPVD1-207ENST00000394105 UGGT1Q9NYU2 1555 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms