RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 PTPRKQ15262 1439 aa10.37□□□□□ -0.75
SMAD1-202ENST00000394092 CHMP7Q8WUX9 453 aaPredicted RBP10.37□□□□□ -0.75
SMAD1-202ENST00000394092 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
SMAD1-202ENST00000394092 MIER1Q8N108 512 aa10.35□□□□□ -0.75
SMAD1-202ENST00000394092 NEUROD1Q13562 356 aa10.34□□□□□ -0.75
SMAD1-202ENST00000394092 TROQ12816 1431 aaPredicted RBP10.33□□□□□ -0.76
SMAD1-202ENST00000394092 ADGBQ8N7X0 1667 aa10.33□□□□□ -0.76
SMAD1-202ENST00000394092 TONSLQ96HA7 1378 aa10.33□□□□□ -0.76
SMAD1-202ENST00000394092 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
SMAD1-202ENST00000394092 DAPK1P53355 1430 aa10.31□□□□□ -0.76
SMAD1-202ENST00000394092 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
SMAD1-202ENST00000394092 ABCA8O94911 1581 aa10.3□□□□□ -0.76
SMAD1-202ENST00000394092 SIN3AQ96ST3 1273 aa10.3□□□□□ -0.76
SMAD1-202ENST00000394092 KIF14Q15058 1648 aa10.3□□□□□ -0.76
SMAD1-202ENST00000394092 PLB1Q6P1J6 1458 aa10.28□□□□□ -0.76
SMAD1-202ENST00000394092 FBLN2P98095 1184 aa10.28□□□□□ -0.76
SMAD1-202ENST00000394092 CHD1O14646 1710 aa10.28□□□□□ -0.76
SMAD1-202ENST00000394092 CAMSAP2Q08AD1 1489 aa10.28□□□□□ -0.76
SMAD1-202ENST00000394092 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
SMAD1-202ENST00000394092 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
SMAD1-202ENST00000394092 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
SMAD1-202ENST00000394092 KDM6BO15054 1643 aa10.26□□□□□ -0.77
SMAD1-202ENST00000394092 ABCC5O15440 1437 aa10.26□□□□□ -0.77
SMAD1-202ENST00000394092 CDC42BPAQ5VT25 1732 aa10.26□□□□□ -0.77
SMAD1-202ENST00000394092 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
SMAD1-202ENST00000394092 RRP7BPQ9NSQ0 103 aa10.25□□□□□ -0.77
SMAD1-202ENST00000394092 PRG4Q92954 1404 aaPredicted RBP10.25□□□□□ -0.77
SMAD1-202ENST00000394092 DSG3P32926 999 aa10.25□□□□□ -0.77
SMAD1-202ENST00000394092 CHIC2Q9UKJ5 165 aa10.25□□□□□ -0.77
SMAD1-202ENST00000394092 ADGRL2O95490 1459 aa10.24□□□□□ -0.77
SMAD1-202ENST00000394092 GPATCH8Q9UKJ3 1502 aaKnown RBP10.24□□□□□ -0.77
SMAD1-202ENST00000394092 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
SMAD1-202ENST00000394092 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
SMAD1-202ENST00000394092 TRIM52Q96A61 297 aa10.23□□□□□ -0.77
SMAD1-202ENST00000394092 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
SMAD1-202ENST00000394092 CAPN15O75808 1086 aa10.22□□□□□ -0.77
SMAD1-202ENST00000394092 CFDP1Q9UEE9 299 aaPredicted RBP10.22□□□□□ -0.77
SMAD1-202ENST00000394092 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.77
SMAD1-202ENST00000394092 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.77
SMAD1-202ENST00000394092 PLEKHD1A6NEE1 506 aa10.21□□□□□ -0.78
SMAD1-202ENST00000394092 NCBP3Q53F19 620 aaKnown RBP10.21□□□□□ -0.78
SMAD1-202ENST00000394092 ABCC10Q5T3U5 1492 aa10.21□□□□□ -0.78
SMAD1-202ENST00000394092 ATP10BO94823 1461 aa10.2□□□□□ -0.78
SMAD1-202ENST00000394092 MPHOSPH9Q99550 1183 aa10.19□□□□□ -0.78
SMAD1-202ENST00000394092 ANKRD30AQ9BXX3 1397 aa10.19□□□□□ -0.78
SMAD1-202ENST00000394092 ARHGEF5Q12774 1597 aa10.19□□□□□ -0.78
SMAD1-202ENST00000394092 PREX2Q70Z35 1606 aa10.19□□□□□ -0.78
SMAD1-202ENST00000394092 PTPRGP23470 1445 aa10.19□□□□□ -0.78
SMAD1-202ENST00000394092 NCOA1Q15788 1441 aa10.18□□□□□ -0.78
SMAD1-202ENST00000394092 RPRD2Q5VT52 1461 aaKnown RBP10.18□□□□□ -0.78
SMAD1-202ENST00000394092 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
SMAD1-202ENST00000394092 ZNF644Q9H582 1327 aaPredicted RBP10.17□□□□□ -0.78
SMAD1-202ENST00000394092 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
SMAD1-202ENST00000394092 ANKRD30BQ9BXX2 1392 aa10.16□□□□□ -0.78
SMAD1-202ENST00000394092 POLR1AO95602 1720 aaPredicted RBP10.16□□□□□ -0.78
SMAD1-202ENST00000394092 CDC42BPBQ9Y5S2 1711 aa10.15□□□□□ -0.78
SMAD1-202ENST00000394092 C9orf84Q5VXU9 1444 aa10.15□□□□□ -0.78
SMAD1-202ENST00000394092 DDX10Q13206 875 aaKnown RBP10.15□□□□□ -0.79
SMAD1-202ENST00000394092 U3KPZ7 1027 aaPredicted RBP10.15□□□□□ -0.79
SMAD1-202ENST00000394092 PZPP20742 1482 aa10.15□□□□□ -0.79
SMAD1-202ENST00000394092 ABCC2Q92887 1545 aa10.14□□□□□ -0.79
SMAD1-202ENST00000394092 KDM5DQ9BY66 1539 aa10.14□□□□□ -0.79
SMAD1-202ENST00000394092 MYO5CQ9NQX4 1742 aa10.14□□□□□ -0.79
SMAD1-202ENST00000394092 TEX14Q8IWB6 1497 aa10.14□□□□□ -0.79
SMAD1-202ENST00000394092 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
SMAD1-202ENST00000394092 ANKRD50Q9ULJ7 1429 aa10.13□□□□□ -0.79
SMAD1-202ENST00000394092 ANP32CO43423 234 aa10.13□□□□□ -0.79
SMAD1-202ENST00000394092 ZNF777Q9ULD5 760 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-202ENST00000394092 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
SMAD1-202ENST00000394092 CCDC141Q6ZP82 1450 aa10.13□□□□□ -0.79
SMAD1-202ENST00000394092 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
SMAD1-202ENST00000394092 CLASP1Q7Z460 1538 aa10.12□□□□□ -0.79
SMAD1-202ENST00000394092 SAMD9LQ8IVG5 1584 aa10.12□□□□□ -0.79
SMAD1-202ENST00000394092 MAST1Q9Y2H9 1570 aa10.12□□□□□ -0.79
SMAD1-202ENST00000394092 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
SMAD1-202ENST00000394092 PLEKHH2Q8IVE3 1493 aa10.11□□□□□ -0.79
SMAD1-202ENST00000394092 TSPY4P0CV99 314 aa10.1□□□□□ -0.79
SMAD1-202ENST00000394092 TSPY10P0CW01 314 aa10.1□□□□□ -0.79
SMAD1-202ENST00000394092 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMAD1-202ENST00000394092 TTC37Q6PGP7 1564 aa10.09□□□□□ -0.79
SMAD1-202ENST00000394092 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
SMAD1-202ENST00000394092 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
SMAD1-202ENST00000394092 L3MBTL2Q969R5 705 aa10.09□□□□□ -0.79
SMAD1-202ENST00000394092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMAD1-202ENST00000394092 UHRF1BP1LA0JNW5 1464 aa10.08□□□□□ -0.8
SMAD1-202ENST00000394092 MBD5Q9P267 1494 aa10.08□□□□□ -0.8
SMAD1-202ENST00000394092 ZCCHC11Q5TAX3 1644 aaKnown RBP10.08□□□□□ -0.8
SMAD1-202ENST00000394092 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
SMAD1-202ENST00000394092 KIF15Q9NS87 1388 aa10.07□□□□□ -0.8
SMAD1-202ENST00000394092 HIRIP3Q9BW71 556 aaPredicted RBP10.07□□□□□ -0.8
SMAD1-202ENST00000394092 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
SMAD1-202ENST00000394092 HSPA5P11021 654 aaKnown RBP10.06□□□□□ -0.8
SMAD1-202ENST00000394092 UNC13BO14795 1591 aa10.06□□□□□ -0.8
SMAD1-202ENST00000394092 CNTLNQ9NXG0 1405 aa10.05□□□□□ -0.8
SMAD1-202ENST00000394092 ERCC6L2Q5T890 1561 aa10.05□□□□□ -0.8
SMAD1-202ENST00000394092 NUP155O75694 1391 aa10.04□□□□□ -0.8
SMAD1-202ENST00000394092 PKD2Q13563 968 aa10.04□□□□□ -0.8
SMAD1-202ENST00000394092 ARAP3Q8WWN8 1544 aa10.03□□□□□ -0.8
SMAD1-202ENST00000394092 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
SMAD1-202ENST00000394092 IQGAP3Q86VI3 1631 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms