RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
GAPVD1-204ENST00000394083 TEX14Q8IWB6 1497 aa12.79□□□□□ -0.36
GAPVD1-204ENST00000394083 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
GAPVD1-204ENST00000394083 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
GAPVD1-204ENST00000394083 UACAQ9BZF9 1416 aa12.77□□□□□ -0.36
GAPVD1-204ENST00000394083 MIER1Q8N108 512 aa12.77□□□□□ -0.36
GAPVD1-204ENST00000394083 MIA2Q96PC5 1412 aa12.77□□□□□ -0.37
GAPVD1-204ENST00000394083 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.37
GAPVD1-204ENST00000394083 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
GAPVD1-204ENST00000394083 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
GAPVD1-204ENST00000394083 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
GAPVD1-204ENST00000394083 FOXD1Q16676 465 aa12.74□□□□□ -0.37
GAPVD1-204ENST00000394083 MYO5CQ9NQX4 1742 aa12.73□□□□□ -0.37
GAPVD1-204ENST00000394083 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
GAPVD1-204ENST00000394083 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
GAPVD1-204ENST00000394083 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-204ENST00000394083 SIGLEC1Q9BZZ2 1709 aa12.72□□□□□ -0.37
GAPVD1-204ENST00000394083 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
GAPVD1-204ENST00000394083 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-204ENST00000394083 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.38
GAPVD1-204ENST00000394083 MROH1Q8NDA8 1641 aa12.69□□□□□ -0.38
GAPVD1-204ENST00000394083 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
GAPVD1-204ENST00000394083 SYCP2Q9BX26 1530 aa12.69□□□□□ -0.38
GAPVD1-204ENST00000394083 PLA2R1Q13018 1463 aa12.69□□□□□ -0.38
GAPVD1-204ENST00000394083 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
GAPVD1-204ENST00000394083 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
GAPVD1-204ENST00000394083 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
GAPVD1-204ENST00000394083 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
GAPVD1-204ENST00000394083 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-204ENST00000394083 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
GAPVD1-204ENST00000394083 APLP2Q06481 763 aa12.67□□□□□ -0.38
GAPVD1-204ENST00000394083 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
GAPVD1-204ENST00000394083 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
GAPVD1-204ENST00000394083 PTPRGP23470 1445 aa12.66□□□□□ -0.38
GAPVD1-204ENST00000394083 SPATA31E1Q6ZUB1 1445 aa12.66□□□□□ -0.38
GAPVD1-204ENST00000394083 UNC13BO14795 1591 aa12.66□□□□□ -0.38
GAPVD1-204ENST00000394083 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
GAPVD1-204ENST00000394083 FBLN2P98095 1184 aa12.65□□□□□ -0.38
GAPVD1-204ENST00000394083 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
GAPVD1-204ENST00000394083 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
GAPVD1-204ENST00000394083 MAGI2Q86UL8 1455 aa12.63□□□□□ -0.39
GAPVD1-204ENST00000394083 RPRD2Q5VT52 1461 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-204ENST00000394083 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-204ENST00000394083 NBPF8Q3BBV2 869 aa12.62□□□□□ -0.39
GAPVD1-204ENST00000394083 E9PCH4 1651 aa12.62□□□□□ -0.39
GAPVD1-204ENST00000394083 ABCC1P33527 1531 aa12.62□□□□□ -0.39
GAPVD1-204ENST00000394083 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
GAPVD1-204ENST00000394083 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
GAPVD1-204ENST00000394083 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
GAPVD1-204ENST00000394083 UHRF1BP1LA0JNW5 1464 aa12.6□□□□□ -0.39
GAPVD1-204ENST00000394083 KDM5CP41229 1560 aa12.6□□□□□ -0.39
GAPVD1-204ENST00000394083 INO80Q9ULG1 1556 aaPredicted RBP12.59□□□□□ -0.39
GAPVD1-204ENST00000394083 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
GAPVD1-204ENST00000394083 IQGAP3Q86VI3 1631 aa12.58□□□□□ -0.39
GAPVD1-204ENST00000394083 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
GAPVD1-204ENST00000394083 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
GAPVD1-204ENST00000394083 TRPM1Q7Z4N2 1603 aa12.56□□□□□ -0.4
GAPVD1-204ENST00000394083 TRAPPC8Q9Y2L5 1435 aa12.56□□□□□ -0.4
GAPVD1-204ENST00000394083 VWDEQ8N2E2 1590 aa12.55□□□□□ -0.4
GAPVD1-204ENST00000394083 MROH2AA6NES4 1674 aa12.55□□□□□ -0.4
GAPVD1-204ENST00000394083 IFT172Q9UG01 1749 aa12.55□□□□□ -0.4
GAPVD1-204ENST00000394083 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
GAPVD1-204ENST00000394083 MPHOSPH9Q99550 1183 aa12.54□□□□□ -0.4
GAPVD1-204ENST00000394083 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
GAPVD1-204ENST00000394083 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
GAPVD1-204ENST00000394083 HNRNPMP52272 730 aaKnown RBP eCLIP12.51□□□□□ -0.416e-13■■■■■ 43.1
GAPVD1-204ENST00000394083 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
GAPVD1-204ENST00000394083 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
GAPVD1-204ENST00000394083 RNF17Q9BXT8 1623 aaKnown RBP12.49□□□□□ -0.41
GAPVD1-204ENST00000394083 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
GAPVD1-204ENST00000394083 RICTORQ6R327 1708 aa12.49□□□□□ -0.41
GAPVD1-204ENST00000394083 CEP152O94986 1710 aa12.48□□□□□ -0.41
GAPVD1-204ENST00000394083 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
GAPVD1-204ENST00000394083 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
GAPVD1-204ENST00000394083 CLTCL1P53675 1640 aa12.47□□□□□ -0.41
GAPVD1-204ENST00000394083 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
GAPVD1-204ENST00000394083 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
GAPVD1-204ENST00000394083 CCDC141Q6ZP82 1450 aa12.47□□□□□ -0.41
GAPVD1-204ENST00000394083 CFAP65Q6ZU64 1925 aaKnown RBP12.46□□□□□ -0.41
GAPVD1-204ENST00000394083 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
GAPVD1-204ENST00000394083 PLCH2O75038 1416 aa12.46□□□□□ -0.41
GAPVD1-204ENST00000394083 ABCA6Q8N139 1617 aa12.46□□□□□ -0.42
GAPVD1-204ENST00000394083 MYOM1P52179 1685 aa12.46□□□□□ -0.42
GAPVD1-204ENST00000394083 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
GAPVD1-204ENST00000394083 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-204ENST00000394083 MAP3K4Q9Y6R4 1608 aa12.45□□□□□ -0.42
GAPVD1-204ENST00000394083 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
GAPVD1-204ENST00000394083 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
GAPVD1-204ENST00000394083 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
GAPVD1-204ENST00000394083 CFDP1Q9UEE9 299 aaPredicted RBP12.42□□□□□ -0.42
GAPVD1-204ENST00000394083 A2MP01023 1474 aa12.42□□□□□ -0.42
GAPVD1-204ENST00000394083 IQGAP1P46940 1657 aa12.42□□□□□ -0.42
GAPVD1-204ENST00000394083 MADDQ8WXG6 1647 aa12.42□□□□□ -0.42
GAPVD1-204ENST00000394083 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
GAPVD1-204ENST00000394083 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
GAPVD1-204ENST00000394083 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
GAPVD1-204ENST00000394083 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
GAPVD1-204ENST00000394083 KIF15Q9NS87 1388 aa12.41□□□□□ -0.42
GAPVD1-204ENST00000394083 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
GAPVD1-204ENST00000394083 ATP10AO60312 1499 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms