RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 DENND4BO75064 1496 aaPredicted RBP20.75■□□□□ 0.91
RNF41-202ENST00000394013 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
RNF41-202ENST00000394013 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
RNF41-202ENST00000394013 DNMT1P26358 1616 aaKnown RBP20.74■□□□□ 0.91
RNF41-202ENST00000394013 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
RNF41-202ENST00000394013 ADCY10Q96PN6 1610 aa20.73■□□□□ 0.91
RNF41-202ENST00000394013 ABCC10Q5T3U5 1492 aa20.7■□□□□ 0.9
RNF41-202ENST00000394013 CDC42BPAQ5VT25 1732 aa20.7■□□□□ 0.9
RNF41-202ENST00000394013 ITSN2Q9NZM3 1697 aa20.67■□□□□ 0.9
RNF41-202ENST00000394013 MPHOSPH9Q99550 1183 aa20.66■□□□□ 0.9
RNF41-202ENST00000394013 CLASP1Q7Z460 1538 aa20.66■□□□□ 0.9
RNF41-202ENST00000394013 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
RNF41-202ENST00000394013 PPP1R15AO75807 674 aaPredicted RBP20.65■□□□□ 0.9
RNF41-202ENST00000394013 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
RNF41-202ENST00000394013 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.9
RNF41-202ENST00000394013 KCNH8Q96L42 1107 aa20.64■□□□□ 0.9
RNF41-202ENST00000394013 TONSLQ96HA7 1378 aa20.63■□□□□ 0.89
RNF41-202ENST00000394013 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
RNF41-202ENST00000394013 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
RNF41-202ENST00000394013 ABCC2Q92887 1545 aa20.58■□□□□ 0.88
RNF41-202ENST00000394013 TTC37Q6PGP7 1564 aa20.57■□□□□ 0.88
RNF41-202ENST00000394013 CROCC2H7BZ55 1655 aa20.56■□□□□ 0.88
RNF41-202ENST00000394013 KDM5BQ9UGL1 1544 aa20.56■□□□□ 0.88
RNF41-202ENST00000394013 CDC42BPBQ9Y5S2 1711 aa20.56■□□□□ 0.88
RNF41-202ENST00000394013 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
RNF41-202ENST00000394013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.88
RNF41-202ENST00000394013 SAMD9LQ8IVG5 1584 aa20.53■□□□□ 0.88
RNF41-202ENST00000394013 TIMELESSQ9UNS1 1208 aa20.52■□□□□ 0.88
RNF41-202ENST00000394013 ADGBQ8N7X0 1667 aa20.52■□□□□ 0.88
RNF41-202ENST00000394013 C9orf84Q5VXU9 1444 aa20.52■□□□□ 0.87
RNF41-202ENST00000394013 ZCCHC11Q5TAX3 1644 aaKnown RBP20.5■□□□□ 0.87
RNF41-202ENST00000394013 PZPP20742 1482 aa20.5■□□□□ 0.87
RNF41-202ENST00000394013 MBD5Q9P267 1494 aa20.5■□□□□ 0.87
RNF41-202ENST00000394013 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
RNF41-202ENST00000394013 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
RNF41-202ENST00000394013 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
RNF41-202ENST00000394013 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
RNF41-202ENST00000394013 DDX10Q13206 875 aaKnown RBP20.48■□□□□ 0.87
RNF41-202ENST00000394013 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
RNF41-202ENST00000394013 ANKRD30BQ9BXX2 1392 aa20.47■□□□□ 0.87
RNF41-202ENST00000394013 ARHGAP5Q13017 1502 aa20.47■□□□□ 0.87
RNF41-202ENST00000394013 ANKRD50Q9ULJ7 1429 aa20.47■□□□□ 0.87
RNF41-202ENST00000394013 TSPY4P0CV99 314 aa20.46■□□□□ 0.87
RNF41-202ENST00000394013 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
RNF41-202ENST00000394013 SYCP2Q9BX26 1530 aa20.46■□□□□ 0.87
RNF41-202ENST00000394013 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
RNF41-202ENST00000394013 KIF15Q9NS87 1388 aa20.43■□□□□ 0.86
RNF41-202ENST00000394013 PKD2Q13563 968 aa20.43■□□□□ 0.86
RNF41-202ENST00000394013 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
RNF41-202ENST00000394013 SHANK2Q9UPX8 1470 aa20.39■□□□□ 0.86
RNF41-202ENST00000394013 NUP155O75694 1391 aa20.39■□□□□ 0.86
RNF41-202ENST00000394013 CCDC141Q6ZP82 1450 aa20.39■□□□□ 0.85
RNF41-202ENST00000394013 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
RNF41-202ENST00000394013 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
RNF41-202ENST00000394013 UHRF1BP1LA0JNW5 1464 aa20.38■□□□□ 0.85
RNF41-202ENST00000394013 ARHGEF5Q12774 1597 aa20.38■□□□□ 0.85
RNF41-202ENST00000394013 RPRD2Q5VT52 1461 aaKnown RBP20.36■□□□□ 0.85
RNF41-202ENST00000394013 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
RNF41-202ENST00000394013 TEX14Q8IWB6 1497 aa20.34■□□□□ 0.85
RNF41-202ENST00000394013 KIAA1107Q9UPP5 1409 aa20.33■□□□□ 0.84
RNF41-202ENST00000394013 CENPBP07199 599 aaPredicted RBP20.32■□□□□ 0.84
RNF41-202ENST00000394013 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
RNF41-202ENST00000394013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.32■□□□□ 0.84
RNF41-202ENST00000394013 PLCH2O75038 1416 aa20.32■□□□□ 0.84
RNF41-202ENST00000394013 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
RNF41-202ENST00000394013 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
RNF41-202ENST00000394013 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
RNF41-202ENST00000394013 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
RNF41-202ENST00000394013 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
RNF41-202ENST00000394013 WDR7Q9Y4E6 1490 aa20.26■□□□□ 0.83
RNF41-202ENST00000394013 C11orf95C9JLR9 678 aaPredicted RBP20.25■□□□□ 0.83
RNF41-202ENST00000394013 GTF3C3Q9Y5Q9 886 aa20.24■□□□□ 0.83
RNF41-202ENST00000394013 RSPH4AQ5TD94 716 aa20.24■□□□□ 0.83
RNF41-202ENST00000394013 ASXL2Q76L83 1435 aa20.23■□□□□ 0.83
RNF41-202ENST00000394013 ABCC1P33527 1531 aa20.23■□□□□ 0.83
RNF41-202ENST00000394013 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
RNF41-202ENST00000394013 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
RNF41-202ENST00000394013 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
RNF41-202ENST00000394013 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
RNF41-202ENST00000394013 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
RNF41-202ENST00000394013 KDM2AQ9Y2K7 1162 aa20.19■□□□□ 0.82
RNF41-202ENST00000394013 FANCAO15360 1455 aa20.16■□□□□ 0.82
RNF41-202ENST00000394013 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
RNF41-202ENST00000394013 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
RNF41-202ENST00000394013 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
RNF41-202ENST00000394013 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
RNF41-202ENST00000394013 PLA2R1Q13018 1463 aa20.12■□□□□ 0.81
RNF41-202ENST00000394013 ABCA9Q8IUA7 1624 aa20.12■□□□□ 0.81
RNF41-202ENST00000394013 UNC13BO14795 1591 aa20.12■□□□□ 0.81
RNF41-202ENST00000394013 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
RNF41-202ENST00000394013 DUOX2Q9NRD8 1548 aa20.11■□□□□ 0.81
RNF41-202ENST00000394013 NPM1P06748 294 aaKnown RBP eCLIP20.1■□□□□ 0.81
RNF41-202ENST00000394013 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
RNF41-202ENST00000394013 ZFYVE16Q7Z3T8 1539 aa20.09■□□□□ 0.81
RNF41-202ENST00000394013 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
RNF41-202ENST00000394013 SPATA31E1Q6ZUB1 1445 aa20.08■□□□□ 0.81
RNF41-202ENST00000394013 ANP32CO43423 234 aa20.08■□□□□ 0.81
RNF41-202ENST00000394013 ERBINQ96RT1 1412 aa20.05■□□□□ 0.8
RNF41-202ENST00000394013 CYB5RLQ6IPT4 315 aa20.05■□□□□ 0.8
RNF41-202ENST00000394013 POLR3GLQ9BT43 218 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms