RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ABCC5O15440 1437 aa32.55■■■□□ 2.8
HMGA2-203ENST00000393578 ROCK1Q13464 1354 aa32.53■■■□□ 2.8
HMGA2-203ENST00000393578 OSCARQ8IYS5 282 aa32.5■■■□□ 2.79
HMGA2-203ENST00000393578 RRP7BPQ9NSQ0 103 aa32.5■■■□□ 2.79
HMGA2-203ENST00000393578 KDM5BQ9UGL1 1544 aa32.48■■■□□ 2.79
HMGA2-203ENST00000393578 ZNF777Q9ULD5 760 aaPredicted RBP32.45■■■□□ 2.78
HMGA2-203ENST00000393578 ZCCHC11Q5TAX3 1644 aaKnown RBP32.44■■■□□ 2.78
HMGA2-203ENST00000393578 PREX2Q70Z35 1606 aa32.39■■■□□ 2.78
HMGA2-203ENST00000393578 ACIN1Q9UKV3 1341 aaKnown RBP32.38■■■□□ 2.77
HMGA2-203ENST00000393578 CROCC2H7BZ55 1655 aa32.38■■■□□ 2.77
HMGA2-203ENST00000393578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.36■■■□□ 2.77
HMGA2-203ENST00000393578 KDM6BO15054 1643 aa32.35■■■□□ 2.77
HMGA2-203ENST00000393578 ADGBQ8N7X0 1667 aa32.34■■■□□ 2.77
HMGA2-203ENST00000393578 CDC42BPBQ9Y5S2 1711 aa32.34■■■□□ 2.77
HMGA2-203ENST00000393578 TTC37Q6PGP7 1564 aa32.34■■■□□ 2.77
HMGA2-203ENST00000393578 ADGRL2O95490 1459 aa32.34■■■□□ 2.77
HMGA2-203ENST00000393578 ZNF316A6NFI3 1004 aaPredicted RBP32.32■■■□□ 2.77
HMGA2-203ENST00000393578 NCOA1Q15788 1441 aa32.31■■■□□ 2.76
HMGA2-203ENST00000393578 SHANK2Q9UPX8 1470 aa32.3■■■□□ 2.76
HMGA2-203ENST00000393578 ARHGEF5Q12774 1597 aa32.28■■■□□ 2.76
HMGA2-203ENST00000393578 TIMELESSQ9UNS1 1208 aa32.28■■■□□ 2.76
HMGA2-203ENST00000393578 SAMD9LQ8IVG5 1584 aa32.27■■■□□ 2.76
HMGA2-203ENST00000393578 MYO5CQ9NQX4 1742 aa32.26■■■□□ 2.75
HMGA2-203ENST00000393578 SIN3AQ96ST3 1273 aa32.26■■■□□ 2.75
HMGA2-203ENST00000393578 ANKRD30AQ9BXX3 1397 aa32.25■■■□□ 2.75
HMGA2-203ENST00000393578 KCNH8Q96L42 1107 aa32.25■■■□□ 2.75
HMGA2-203ENST00000393578 MBD5Q9P267 1494 aa32.24■■■□□ 2.75
HMGA2-203ENST00000393578 TRIM52Q96A61 297 aa32.23■■■□□ 2.75
HMGA2-203ENST00000393578 ARHGAP5Q13017 1502 aa32.23■■■□□ 2.75
HMGA2-203ENST00000393578 C9orf84Q5VXU9 1444 aa32.21■■■□□ 2.75
HMGA2-203ENST00000393578 NEUROD1Q13562 356 aa32.21■■■□□ 2.75
HMGA2-203ENST00000393578 RSPH4AQ5TD94 716 aa32.21■■■□□ 2.75
HMGA2-203ENST00000393578 TSPY4P0CV99 314 aa32.19■■■□□ 2.74
HMGA2-203ENST00000393578 TSPY10P0CW01 314 aa32.19■■■□□ 2.74
HMGA2-203ENST00000393578 HNRNPMP52272 730 aaKnown RBP eCLIP32.19■■■□□ 2.742e-8■■□□□ 11.6
HMGA2-203ENST00000393578 PLCH2O75038 1416 aa32.17■■■□□ 2.74
HMGA2-203ENST00000393578 CCDC141Q6ZP82 1450 aa32.17■■■□□ 2.74
HMGA2-203ENST00000393578 DENND4BO75064 1496 aaPredicted RBP32.16■■■□□ 2.74
HMGA2-203ENST00000393578 WDR7Q9Y4E6 1490 aa32.16■■■□□ 2.74
HMGA2-203ENST00000393578 PLEKHH2Q8IVE3 1493 aa32.15■■■□□ 2.74
HMGA2-203ENST00000393578 MPHOSPH9Q99550 1183 aa32.15■■■□□ 2.74
HMGA2-203ENST00000393578 KIAA1107Q9UPP5 1409 aa32.13■■■□□ 2.73
HMGA2-203ENST00000393578 SYCP2Q9BX26 1530 aa32.11■■■□□ 2.73
HMGA2-203ENST00000393578 DIEXFQ68CQ4 756 aaKnown RBP32.1■■■□□ 2.73
HMGA2-203ENST00000393578 ANKRD50Q9ULJ7 1429 aa32.09■■■□□ 2.73
HMGA2-203ENST00000393578 ARAP3Q8WWN8 1544 aa32.08■■■□□ 2.73
HMGA2-203ENST00000393578 EFCAB2Q5VUJ9 269 aa32.07■■■□□ 2.72
HMGA2-203ENST00000393578 MAST1Q9Y2H9 1570 aa32.05■■■□□ 2.72
HMGA2-203ENST00000393578 ASXL2Q76L83 1435 aa32.03■■■□□ 2.72
HMGA2-203ENST00000393578 TONSLQ96HA7 1378 aa32.03■■■□□ 2.72
HMGA2-203ENST00000393578 KIF15Q9NS87 1388 aa32.03■■■□□ 2.72
HMGA2-203ENST00000393578 NPM1P06748 294 aaKnown RBP eCLIP32.01■■■□□ 2.71
HMGA2-203ENST00000393578 ABCA9Q8IUA7 1624 aa32■■■□□ 2.71
HMGA2-203ENST00000393578 PPP1R15AO75807 674 aaPredicted RBP31.99■■■□□ 2.71
HMGA2-203ENST00000393578 PZPP20742 1482 aa31.99■■■□□ 2.71
HMGA2-203ENST00000393578 SLC4A1APQ9BWU0 796 aaKnown RBP31.99■■■□□ 2.71
HMGA2-203ENST00000393578 ABCC1P33527 1531 aa31.98■■■□□ 2.71
HMGA2-203ENST00000393578 ARHGEF12Q9NZN5 1544 aa31.97■■■□□ 2.71
HMGA2-203ENST00000393578 ANKRD30BQ9BXX2 1392 aa31.94■■■□□ 2.7
HMGA2-203ENST00000393578 PLXNC1O60486 1568 aa31.92■■■□□ 2.7
HMGA2-203ENST00000393578 FOXD1Q16676 465 aa31.9■■■□□ 2.7
HMGA2-203ENST00000393578 KDM5DQ9BY66 1539 aa31.89■■■□□ 2.7
HMGA2-203ENST00000393578 FANCAO15360 1455 aa31.86■■■□□ 2.69
HMGA2-203ENST00000393578 NUP155O75694 1391 aa31.85■■■□□ 2.69
HMGA2-203ENST00000393578 RIMBP3CA6NJZ7 1639 aa31.85■■■□□ 2.69
HMGA2-203ENST00000393578 RIMBP3BA6NNM3 1639 aa31.85■■■□□ 2.69
HMGA2-203ENST00000393578 RIMBP3Q9UFD9 1639 aa31.85■■■□□ 2.69
HMGA2-203ENST00000393578 TRAPPC8Q9Y2L5 1435 aa31.84■■■□□ 2.69
HMGA2-203ENST00000393578 RPRD2Q5VT52 1461 aaKnown RBP31.83■■■□□ 2.69
HMGA2-203ENST00000393578 DUOX2Q9NRD8 1548 aa31.8■■■□□ 2.68
HMGA2-203ENST00000393578 PKD2Q13563 968 aa31.79■■■□□ 2.68
HMGA2-203ENST00000393578 RTEL1-TNFRSF6BF6WH68 1400 aa31.77■■■□□ 2.68
HMGA2-203ENST00000393578 ERBINQ96RT1 1412 aa31.74■■■□□ 2.67
HMGA2-203ENST00000393578 UNC13BO14795 1591 aa31.74■■■□□ 2.67
HMGA2-203ENST00000393578 SPAG9O60271 1321 aaKnown RBP31.74■■■□□ 2.67
HMGA2-203ENST00000393578 ADGRL1O94910 1474 aa31.73■■■□□ 2.67
HMGA2-203ENST00000393578 AFAP1Q8N556 730 aa31.71■■■□□ 2.67
HMGA2-203ENST00000393578 ZFYVE16Q7Z3T8 1539 aa31.7■■■□□ 2.67
HMGA2-203ENST00000393578 FAM135AQ9P2D6 1515 aa31.69■■■□□ 2.66
HMGA2-203ENST00000393578 L3MBTL2Q969R5 705 aa31.69■■■□□ 2.66
HMGA2-203ENST00000393578 SCAPERQ9BY12 1400 aa31.69■■■□□ 2.66
HMGA2-203ENST00000393578 CD109Q6YHK3 1445 aa31.68■■■□□ 2.66
HMGA2-203ENST00000393578 CYB5RLQ6IPT4 315 aa31.67■■■□□ 2.66
HMGA2-203ENST00000393578 TEX14Q8IWB6 1497 aa31.66■■■□□ 2.66
HMGA2-203ENST00000393578 CFAP74Q9C0B2 1584 aa31.65■■■□□ 2.66
HMGA2-203ENST00000393578 INO80Q9ULG1 1556 aaPredicted RBP31.64■■■□□ 2.66
HMGA2-203ENST00000393578 MAGI2Q86UL8 1455 aa31.63■■■□□ 2.65
HMGA2-203ENST00000393578 ATP7AQ04656 1500 aa31.62■■■□□ 2.65
HMGA2-203ENST00000393578 IQGAP3Q86VI3 1631 aa31.61■■■□□ 2.65
HMGA2-203ENST00000393578 ZNF518AQ6AHZ1 1483 aa31.56■■■□□ 2.64
HMGA2-203ENST00000393578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.55■■■□□ 2.644e-9■□□□□ 8.3
HMGA2-203ENST00000393578 MIER1Q8N108 512 aa31.52■■■□□ 2.64
HMGA2-203ENST00000393578 NEO1Q92859 1461 aa31.5■■■□□ 2.63
HMGA2-203ENST00000393578 MAP3K4Q9Y6R4 1608 aa31.49■■■□□ 2.63
HMGA2-203ENST00000393578 POGZQ7Z3K3 1410 aa31.48■■■□□ 2.63
HMGA2-203ENST00000393578 GLI2P10070 1586 aa31.47■■■□□ 2.63
HMGA2-203ENST00000393578 KDM5CP41229 1560 aa31.46■■■□□ 2.63
HMGA2-203ENST00000393578 DEPDC5O75140 1603 aa31.46■■■□□ 2.63
HMGA2-203ENST00000393578 KIDINS220Q9ULH0 1771 aa31.46■■■□□ 2.63
HMGA2-203ENST00000393578 MYT1LQ9UL68 1186 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms