RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TRAK2O60296 914 aa5.2□□□□□ -1.58
XRN1-202ENST00000392981 DDRGK1Q96HY6 314 aa5.2□□□□□ -1.58
XRN1-202ENST00000392981 LARP6Q9BRS8 491 aaKnown RBP5.2□□□□□ -1.58
XRN1-202ENST00000392981 ZMYND10O75800 440 aa5.19□□□□□ -1.58
XRN1-202ENST00000392981 WWC1Q8IX03 1113 aa5.19□□□□□ -1.58
XRN1-202ENST00000392981 BARGINQ6ZT62 677 aa5.19□□□□□ -1.58
XRN1-202ENST00000392981 DHX37Q8IY37 1157 aaKnown RBP5.19□□□□□ -1.58
XRN1-202ENST00000392981 SPINK5Q9NQ38 1064 aaPredicted RBP5.19□□□□□ -1.58
XRN1-202ENST00000392981 OSCARQ8IYS5 282 aa5.19□□□□□ -1.58
XRN1-202ENST00000392981 CLEC11AQ9Y240 323 aa5.18□□□□□ -1.58
XRN1-202ENST00000392981 ZNF330Q9Y3S2 320 aaPredicted RBP5.18□□□□□ -1.58
XRN1-202ENST00000392981 PROSER2Q86WR7 435 aaPredicted RBP5.17□□□□□ -1.58
XRN1-202ENST00000392981 PUS7Q96PZ0 661 aaKnown RBP5.17□□□□□ -1.58
XRN1-202ENST00000392981 CCDC27Q2M243 656 aa5.17□□□□□ -1.58
XRN1-202ENST00000392981 CCER1Q8TC90 406 aaPredicted RBP5.17□□□□□ -1.58
XRN1-202ENST00000392981 CALR3Q96L12 384 aaKnown RBP5.17□□□□□ -1.58
XRN1-202ENST00000392981 TRIM66O15016 1216 aa5.16□□□□□ -1.58
XRN1-202ENST00000392981 TESPA1A2RU30 521 aaPredicted RBP5.16□□□□□ -1.58
XRN1-202ENST00000392981 CSB-PGBD3P0DP91 1061 aa5.16□□□□□ -1.58
XRN1-202ENST00000392981 RSPH4AQ5TD94 716 aa5.16□□□□□ -1.58
XRN1-202ENST00000392981 TRAIPQ9BWF2 469 aa5.15□□□□□ -1.59
XRN1-202ENST00000392981 RGS22Q8NE09 1264 aa5.14□□□□□ -1.59
XRN1-202ENST00000392981 PDE4CQ08493 712 aa5.14□□□□□ -1.59
XRN1-202ENST00000392981 FAM177A1Q8N128 213 aaPredicted RBP5.14□□□□□ -1.59
XRN1-202ENST00000392981 BRD2P25440 801 aaKnown RBP5.13□□□□□ -1.59
XRN1-202ENST00000392981 GRXCR2A6NFK2 248 aa5.13□□□□□ -1.59
XRN1-202ENST00000392981 ABL2P42684 1182 aa5.12□□□□□ -1.59
XRN1-202ENST00000392981 POLR3EQ9NVU0 708 aa5.12□□□□□ -1.59
XRN1-202ENST00000392981 SPDYE2BA6NHP3 402 aa5.11□□□□□ -1.59
XRN1-202ENST00000392981 SPDYE6P0CI01 402 aa5.11□□□□□ -1.59
XRN1-202ENST00000392981 SPDYE2Q495Y8 402 aa5.11□□□□□ -1.59
XRN1-202ENST00000392981 TSPYL2Q9H2G4 693 aaPredicted RBP5.11□□□□□ -1.59
XRN1-202ENST00000392981 PATL2C9JE40 543 aaKnown RBP5.1□□□□□ -1.59
XRN1-202ENST00000392981 GOLGA2Q08379 1002 aa5.1□□□□□ -1.59
XRN1-202ENST00000392981 MLLT3P42568 568 aaPredicted RBP5.1□□□□□ -1.59
XRN1-202ENST00000392981 POM121Q96HA1 1249 aa5.1□□□□□ -1.59
XRN1-202ENST00000392981 CWC22Q9HCG8 908 aaKnown RBP5.09□□□□□ -1.59
XRN1-202ENST00000392981 DDX27Q96GQ7 796 aaKnown RBP5.09□□□□□ -1.59
XRN1-202ENST00000392981 IVNS1ABPQ9Y6Y0 642 aa5.09□□□□□ -1.59
XRN1-202ENST00000392981 CDCA8Q53HL2 280 aa5.09□□□□□ -1.6
XRN1-202ENST00000392981 PDE4AP27815 886 aa5.08□□□□□ -1.6
XRN1-202ENST00000392981 PRM3Q9NNZ6 103 aa5.08□□□□□ -1.6
XRN1-202ENST00000392981 IRF5Q13568 498 aa5.08□□□□□ -1.6
XRN1-202ENST00000392981 PSMD1Q99460 953 aa5.08□□□□□ -1.6
XRN1-202ENST00000392981 A6NJR5 290 aa5.08□□□□□ -1.6
XRN1-202ENST00000392981 CARNS1A5YM72 827 aa5.07□□□□□ -1.6
XRN1-202ENST00000392981 SMARCA5O60264 1052 aaPredicted RBP5.07□□□□□ -1.6
XRN1-202ENST00000392981 CCDC102AQ96A19 550 aa5.07□□□□□ -1.6
XRN1-202ENST00000392981 NOL8Q76FK4 1167 aaKnown RBP5.07□□□□□ -1.6
XRN1-202ENST00000392981 BCL11AQ9H165 835 aa5.06□□□□□ -1.6
XRN1-202ENST00000392981 NCLP19338 710 aaKnown RBP5.05□□□□□ -1.6
XRN1-202ENST00000392981 MCM6Q14566 821 aa5.05□□□□□ -1.6
XRN1-202ENST00000392981 CABP2Q9NPB3 220 aa5.05□□□□□ -1.6
XRN1-202ENST00000392981 PCDHB8Q9UN66 801 aa5.05□□□□□ -1.6
XRN1-202ENST00000392981 PCDHB13Q9Y5F0 798 aa5.05□□□□□ -1.6
XRN1-202ENST00000392981 CSPP1Q1MSJ5 1256 aa5.05□□□□□ -1.6
XRN1-202ENST00000392981 BIN2Q9UBW5 565 aaPredicted RBP5.05□□□□□ -1.6
XRN1-202ENST00000392981 PRR29P0C7W0 189 aa5.04□□□□□ -1.6
XRN1-202ENST00000392981 PDAP1Q13442 181 aaKnown RBP5.04□□□□□ -1.6
XRN1-202ENST00000392981 A0A0U1RQG5 324 aaPredicted RBP5.04□□□□□ -1.6
XRN1-202ENST00000392981 NUBP1P53384 320 aa5.04□□□□□ -1.6
XRN1-202ENST00000392981 DPYSL4O14531 572 aa5.04□□□□□ -1.6
XRN1-202ENST00000392981 ZNF467Q7Z7K2 595 aaPredicted RBP5.04□□□□□ -1.6
XRN1-202ENST00000392981 PARP9Q8IXQ6 854 aa5.04□□□□□ -1.6
XRN1-202ENST00000392981 NLRP6P59044 892 aa5.03□□□□□ -1.6
XRN1-202ENST00000392981 GDPD2Q9HCC8 539 aa5.03□□□□□ -1.6
XRN1-202ENST00000392981 NISCHQ9Y2I1 1504 aa5.03□□□□□ -1.6
XRN1-202ENST00000392981 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.03□□□□□ -1.6
XRN1-202ENST00000392981 PLEKHG3A1L390 1219 aa5.03□□□□□ -1.6
XRN1-202ENST00000392981 PPP1R37O75864 691 aa5.03□□□□□ -1.6
XRN1-202ENST00000392981 TSC1Q92574 1164 aa5.02□□□□□ -1.61
XRN1-202ENST00000392981 FOSBP53539 338 aa5.02□□□□□ -1.61
XRN1-202ENST00000392981 SOX12O15370 315 aa5.02□□□□□ -1.61
XRN1-202ENST00000392981 ANKRD62A6NC57 917 aa5.01□□□□□ -1.61
XRN1-202ENST00000392981 PSEN1P49768 467 aa5.01□□□□□ -1.61
XRN1-202ENST00000392981 RASEFQ8IZ41 740 aa5.01□□□□□ -1.61
XRN1-202ENST00000392981 KDM4AO75164 1064 aa5.01□□□□□ -1.61
XRN1-202ENST00000392981 PPP1R15AO75807 674 aaPredicted RBP5.01□□□□□ -1.61
XRN1-202ENST00000392981 GIGYF2Q6Y7W6 1299 aaKnown RBP5.01□□□□□ -1.61
XRN1-202ENST00000392981 PHF8Q9UPP1 1060 aa5.01□□□□□ -1.61
XRN1-202ENST00000392981 ZNF592Q92610 1267 aa5.01□□□□□ -1.61
XRN1-202ENST00000392981 MINK1Q8N4C8 1332 aaPredicted RBP5□□□□□ -1.61
XRN1-202ENST00000392981 MDM2Q00987 491 aaPredicted RBP5□□□□□ -1.61
XRN1-202ENST00000392981 KCNA1Q09470 495 aa4.99□□□□□ -1.61
XRN1-202ENST00000392981 GLMNQ92990 594 aa4.99□□□□□ -1.61
XRN1-202ENST00000392981 MRRFQ96E11 262 aaKnown RBP4.99□□□□□ -1.61
XRN1-202ENST00000392981 EFCAB3Q8N7B9 438 aa4.99□□□□□ -1.61
XRN1-202ENST00000392981 BCL2L13Q9BXK5 485 aa4.99□□□□□ -1.61
XRN1-202ENST00000392981 LMOD1P29536 600 aaPredicted RBP4.98□□□□□ -1.61
XRN1-202ENST00000392981 ANKRD13AQ8IZ07 590 aa4.98□□□□□ -1.61
XRN1-202ENST00000392981 MFRPQ9BY79 579 aa4.98□□□□□ -1.61
XRN1-202ENST00000392981 BRD1O95696 1058 aa4.98□□□□□ -1.61
XRN1-202ENST00000392981 NEFLP07196 543 aa4.98□□□□□ -1.61
XRN1-202ENST00000392981 PROCA1Q8NCQ7 364 aaPredicted RBP4.98□□□□□ -1.61
XRN1-202ENST00000392981 UBE2Q2Q8WVN8 375 aa4.98□□□□□ -1.61
XRN1-202ENST00000392981 MAP2K5Q13163 448 aa4.97□□□□□ -1.61
XRN1-202ENST00000392981 PLSCR2Q9NRY7 297 aa4.97□□□□□ -1.61
XRN1-202ENST00000392981 UPF1Q92900 1129 aaKnown RBP eCLIP4.97□□□□□ -1.61
XRN1-202ENST00000392981 COG6Q9Y2V7 657 aa4.97□□□□□ -1.61
XRN1-202ENST00000392981 BEGAINQ9BUH8 593 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms