RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 NLRP6P59044 892 aa10.82□□□□□ -0.68
RNU6-1009P-201ENST00000390996 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
RNU6-1009P-201ENST00000390996 MFRPQ9BY79 579 aa10.81□□□□□ -0.68
RNU6-1009P-201ENST00000390996 RGL2O15211 777 aa10.8□□□□□ -0.68
RNU6-1009P-201ENST00000390996 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
RNU6-1009P-201ENST00000390996 ZNF710Q8N1W2 664 aa10.8□□□□□ -0.68
RNU6-1009P-201ENST00000390996 STK25O00506 426 aa10.78□□□□□ -0.68
RNU6-1009P-201ENST00000390996 ZSWIM6Q9HCJ5 1215 aa10.75□□□□□ -0.69
RNU6-1009P-201ENST00000390996 RIMBP2O15034 1052 aa10.74□□□□□ -0.69
RNU6-1009P-201ENST00000390996 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
RNU6-1009P-201ENST00000390996 ERBB3P21860 1342 aa10.72□□□□□ -0.69
RNU6-1009P-201ENST00000390996 KIF3CO14782 793 aa10.7□□□□□ -0.7
RNU6-1009P-201ENST00000390996 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
RNU6-1009P-201ENST00000390996 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
RNU6-1009P-201ENST00000390996 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
RNU6-1009P-201ENST00000390996 PPP1R37O75864 691 aa10.62□□□□□ -0.71
RNU6-1009P-201ENST00000390996 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
RNU6-1009P-201ENST00000390996 KHSRPQ92945 711 aaKnown RBP eCLIP10.61□□□□□ -0.71
RNU6-1009P-201ENST00000390996 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
RNU6-1009P-201ENST00000390996 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
RNU6-1009P-201ENST00000390996 SLC34A2O95436 690 aa10.56□□□□□ -0.72
RNU6-1009P-201ENST00000390996 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
RNU6-1009P-201ENST00000390996 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
RNU6-1009P-201ENST00000390996 NUDT7P0C024 238 aa10.51□□□□□ -0.73
RNU6-1009P-201ENST00000390996 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
RNU6-1009P-201ENST00000390996 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
RNU6-1009P-201ENST00000390996 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
RNU6-1009P-201ENST00000390996 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
RNU6-1009P-201ENST00000390996 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
RNU6-1009P-201ENST00000390996 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
RNU6-1009P-201ENST00000390996 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
RNU6-1009P-201ENST00000390996 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
RNU6-1009P-201ENST00000390996 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
RNU6-1009P-201ENST00000390996 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
RNU6-1009P-201ENST00000390996 FOXK1P85037 733 aa10.43□□□□□ -0.74
RNU6-1009P-201ENST00000390996 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
RNU6-1009P-201ENST00000390996 PTGER2P43116 358 aa10.42□□□□□ -0.74
RNU6-1009P-201ENST00000390996 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
RNU6-1009P-201ENST00000390996 PBX2P40425 430 aa10.41□□□□□ -0.74
RNU6-1009P-201ENST00000390996 DSG2Q14126 1118 aa10.4□□□□□ -0.74
RNU6-1009P-201ENST00000390996 PLPP6Q8IY26 295 aa10.4□□□□□ -0.74
RNU6-1009P-201ENST00000390996 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
RNU6-1009P-201ENST00000390996 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
RNU6-1009P-201ENST00000390996 CRISPLD2Q9H0B8 497 aa10.33□□□□□ -0.76
RNU6-1009P-201ENST00000390996 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
RNU6-1009P-201ENST00000390996 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
RNU6-1009P-201ENST00000390996 OXER1Q8TDS5 423 aa10.3□□□□□ -0.76
RNU6-1009P-201ENST00000390996 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
RNU6-1009P-201ENST00000390996 GTPBP6O43824 516 aaPredicted RBP10.28□□□□□ -0.76
RNU6-1009P-201ENST00000390996 TBC1D12O60347 775 aa10.28□□□□□ -0.76
RNU6-1009P-201ENST00000390996 ADGRD1Q6QNK2 874 aa10.27□□□□□ -0.77
RNU6-1009P-201ENST00000390996 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
RNU6-1009P-201ENST00000390996 PSEN2P49810 448 aa10.25□□□□□ -0.77
RNU6-1009P-201ENST00000390996 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
RNU6-1009P-201ENST00000390996 PPP1R15BQ5SWA1 713 aa10.25□□□□□ -0.77
RNU6-1009P-201ENST00000390996 TK2O00142 265 aa10.24□□□□□ -0.77
RNU6-1009P-201ENST00000390996 HRO43593 1189 aa10.23□□□□□ -0.77
RNU6-1009P-201ENST00000390996 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNU6-1009P-201ENST00000390996 PDE4AP27815 886 aa10.2□□□□□ -0.78
RNU6-1009P-201ENST00000390996 KCNK17Q96T54 332 aa10.18□□□□□ -0.78
RNU6-1009P-201ENST00000390996 MFSD10Q14728 455 aa10.17□□□□□ -0.78
RNU6-1009P-201ENST00000390996 FOSBP53539 338 aa10.16□□□□□ -0.78
RNU6-1009P-201ENST00000390996 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1009P-201ENST00000390996 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
RNU6-1009P-201ENST00000390996 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
RNU6-1009P-201ENST00000390996 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
RNU6-1009P-201ENST00000390996 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
RNU6-1009P-201ENST00000390996 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
RNU6-1009P-201ENST00000390996 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
RNU6-1009P-201ENST00000390996 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
RNU6-1009P-201ENST00000390996 EVI5O60447 810 aa10.11□□□□□ -0.79
RNU6-1009P-201ENST00000390996 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
RNU6-1009P-201ENST00000390996 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
RNU6-1009P-201ENST00000390996 SLC4A5Q9BY07 1137 aa10.11□□□□□ -0.79
RNU6-1009P-201ENST00000390996 KCNH8Q96L42 1107 aa10.1□□□□□ -0.79
RNU6-1009P-201ENST00000390996 EMILIN3Q9NT22 766 aa10.1□□□□□ -0.79
RNU6-1009P-201ENST00000390996 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
RNU6-1009P-201ENST00000390996 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
RNU6-1009P-201ENST00000390996 PLA2G2EQ9NZK7 142 aa10.07□□□□□ -0.8
RNU6-1009P-201ENST00000390996 PTPREP23469 700 aa10.06□□□□□ -0.8
RNU6-1009P-201ENST00000390996 ZBED2Q9BTP6 218 aa10.06□□□□□ -0.8
RNU6-1009P-201ENST00000390996 BHMG1C9JSJ3 638 aaPredicted RBP10.05□□□□□ -0.8
RNU6-1009P-201ENST00000390996 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
RNU6-1009P-201ENST00000390996 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
RNU6-1009P-201ENST00000390996 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
RNU6-1009P-201ENST00000390996 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
RNU6-1009P-201ENST00000390996 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
RNU6-1009P-201ENST00000390996 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.82
RNU6-1009P-201ENST00000390996 PHF14O94880 888 aa9.96□□□□□ -0.82
RNU6-1009P-201ENST00000390996 COL9A1P20849 921 aa9.96□□□□□ -0.82
RNU6-1009P-201ENST00000390996 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
RNU6-1009P-201ENST00000390996 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.82
RNU6-1009P-201ENST00000390996 TYW1BQ6NUM6 668 aa9.95□□□□□ -0.82
RNU6-1009P-201ENST00000390996 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
RNU6-1009P-201ENST00000390996 PTPN5P54829 565 aa9.94□□□□□ -0.82
RNU6-1009P-201ENST00000390996 MRPL50Q8N5N7 158 aaKnown RBP9.94□□□□□ -0.82
RNU6-1009P-201ENST00000390996 DPYSL4O14531 572 aa9.93□□□□□ -0.82
RNU6-1009P-201ENST00000390996 PROX2Q3B8N5 592 aa9.92□□□□□ -0.82
RNU6-1009P-201ENST00000390996 WNT2BQ93097 391 aa9.92□□□□□ -0.82
RNU6-1009P-201ENST00000390996 NBPF3Q9H094 633 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms