RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 BCL11BQ9C0K0 894 aaPredicted RBP6.71□□□□□ -1.34
SNORA40.19-201ENST00000390846 PPP1R37O75864 691 aa6.68□□□□□ -1.34
SNORA40.19-201ENST00000390846 KHSRPQ92945 711 aaKnown RBP eCLIP6.68□□□□□ -1.34
SNORA40.19-201ENST00000390846 KDM4FA0A1W2PPD8 638 aa6.65□□□□□ -1.34
SNORA40.19-201ENST00000390846 POTEEQ6S8J3 1075 aa6.65□□□□□ -1.34
SNORA40.19-201ENST00000390846 NLRP6P59044 892 aa6.64□□□□□ -1.35
SNORA40.19-201ENST00000390846 DOK7Q18PE1 504 aa6.64□□□□□ -1.35
SNORA40.19-201ENST00000390846 C2orf72A6NCS6 295 aa6.63□□□□□ -1.35
SNORA40.19-201ENST00000390846 ARSIQ5FYB1 569 aa6.63□□□□□ -1.35
SNORA40.19-201ENST00000390846 STK24Q9Y6E0 443 aa6.63□□□□□ -1.35
SNORA40.19-201ENST00000390846 ECM2O94769 699 aaPredicted RBP6.62□□□□□ -1.35
SNORA40.19-201ENST00000390846 ZSWIM6Q9HCJ5 1215 aa6.62□□□□□ -1.35
SNORA40.19-201ENST00000390846 VARS2Q5ST30 1063 aaKnown RBP6.61□□□□□ -1.35
SNORA40.19-201ENST00000390846 STK25O00506 426 aa6.6□□□□□ -1.35
SNORA40.19-201ENST00000390846 ZNF687Q8N1G0 1237 aa6.6□□□□□ -1.35
SNORA40.19-201ENST00000390846 NKX1-1Q15270 411 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.19-201ENST00000390846 ERBB3P21860 1342 aa6.58□□□□□ -1.36
SNORA40.19-201ENST00000390846 ZNF710Q8N1W2 664 aa6.58□□□□□ -1.36
SNORA40.19-201ENST00000390846 G3V3G9 751 aa6.57□□□□□ -1.36
SNORA40.19-201ENST00000390846 SLC34A2O95436 690 aa6.57□□□□□ -1.36
SNORA40.19-201ENST00000390846 ZNF316A6NFI3 1004 aaPredicted RBP6.55□□□□□ -1.36
SNORA40.19-201ENST00000390846 DNAJC5Q9H3Z4 198 aa6.55□□□□□ -1.36
SNORA40.19-201ENST00000390846 HS6ST3Q8IZP7 471 aa6.53□□□□□ -1.36
SNORA40.19-201ENST00000390846 PCDHGA4Q9Y5G9 962 aa6.53□□□□□ -1.36
SNORA40.19-201ENST00000390846 NUDT7P0C024 238 aa6.52□□□□□ -1.37
SNORA40.19-201ENST00000390846 LHX6Q9UPM6 363 aa6.52□□□□□ -1.37
SNORA40.19-201ENST00000390846 RIMBP2O15034 1052 aa6.5□□□□□ -1.37
SNORA40.19-201ENST00000390846 PTCD2Q8WV60 388 aaKnown RBP6.49□□□□□ -1.37
SNORA40.19-201ENST00000390846 FOXK1P85037 733 aa6.48□□□□□ -1.37
SNORA40.19-201ENST00000390846 DSG2Q14126 1118 aa6.48□□□□□ -1.37
SNORA40.19-201ENST00000390846 TAOK2Q9UL54 1235 aa6.48□□□□□ -1.37
SNORA40.19-201ENST00000390846 AXIN2Q9Y2T1 843 aa6.48□□□□□ -1.37
SNORA40.19-201ENST00000390846 LSM11P83369 360 aaKnown RBP eCLIP6.47□□□□□ -1.37
SNORA40.19-201ENST00000390846 GPHNQ9NQX3 736 aaPredicted RBP6.47□□□□□ -1.37
SNORA40.19-201ENST00000390846 RNF166Q96A37 237 aaPredicted RBP6.45□□□□□ -1.38
SNORA40.19-201ENST00000390846 CRISPLD2Q9H0B8 497 aa6.45□□□□□ -1.38
SNORA40.19-201ENST00000390846 MYT1LQ9UL68 1186 aa6.45□□□□□ -1.38
SNORA40.19-201ENST00000390846 NCKAP5LQ9HCH0 1330 aa6.45□□□□□ -1.38
SNORA40.19-201ENST00000390846 PLPP6Q8IY26 295 aa6.44□□□□□ -1.38
SNORA40.19-201ENST00000390846 HRO43593 1189 aa6.43□□□□□ -1.38
SNORA40.19-201ENST00000390846 DMRTA1Q5VZB9 504 aa6.43□□□□□ -1.38
SNORA40.19-201ENST00000390846 GTPBP6O43824 516 aaPredicted RBP6.42□□□□□ -1.38
SNORA40.19-201ENST00000390846 TMC2Q8TDI7 906 aa6.42□□□□□ -1.38
SNORA40.19-201ENST00000390846 OXER1Q8TDS5 423 aa6.42□□□□□ -1.38
SNORA40.19-201ENST00000390846 CHGAP10645 457 aaKnown RBP6.41□□□□□ -1.38
SNORA40.19-201ENST00000390846 ANKRD13DQ6ZTN6 518 aa6.41□□□□□ -1.38
SNORA40.19-201ENST00000390846 PSEN2P49810 448 aa6.4□□□□□ -1.38
SNORA40.19-201ENST00000390846 PBX2P40425 430 aa6.39□□□□□ -1.39
SNORA40.19-201ENST00000390846 CADPS2Q86UW7 1296 aa6.37□□□□□ -1.39
SNORA40.19-201ENST00000390846 ANO8Q9HCE9 1232 aaPredicted RBP6.37□□□□□ -1.39
SNORA40.19-201ENST00000390846 ARHGAP33O14559 1287 aa6.36□□□□□ -1.39
SNORA40.19-201ENST00000390846 ADGRD1Q6QNK2 874 aa6.36□□□□□ -1.39
SNORA40.19-201ENST00000390846 PTGER2P43116 358 aa6.35□□□□□ -1.39
SNORA40.19-201ENST00000390846 MFSD10Q14728 455 aa6.34□□□□□ -1.39
SNORA40.19-201ENST00000390846 BHMG1C9JSJ3 638 aaPredicted RBP6.33□□□□□ -1.4
SNORA40.19-201ENST00000390846 TK2O00142 265 aa6.33□□□□□ -1.4
SNORA40.19-201ENST00000390846 EMILIN3Q9NT22 766 aa6.33□□□□□ -1.4
SNORA40.19-201ENST00000390846 FOSBP53539 338 aa6.31□□□□□ -1.4
SNORA40.19-201ENST00000390846 PPP1R15BQ5SWA1 713 aa6.31□□□□□ -1.4
SNORA40.19-201ENST00000390846 VPS9D1Q9Y2B5 631 aa6.3□□□□□ -1.4
SNORA40.19-201ENST00000390846 PSDA5PKW4 1024 aaPredicted RBP6.29□□□□□ -1.4
SNORA40.19-201ENST00000390846 UPF1Q92900 1129 aaKnown RBP eCLIP6.29□□□□□ -1.4
SNORA40.19-201ENST00000390846 BCL2L12Q9HB09 334 aa6.28□□□□□ -1.4
SNORA40.19-201ENST00000390846 ZBED2Q9BTP6 218 aa6.27□□□□□ -1.41
SNORA40.19-201ENST00000390846 SLC4A5Q9BY07 1137 aa6.27□□□□□ -1.41
SNORA40.19-201ENST00000390846 ADAM33Q9BZ11 813 aa6.27□□□□□ -1.41
SNORA40.19-201ENST00000390846 KCNK17Q96T54 332 aa6.26□□□□□ -1.41
SNORA40.19-201ENST00000390846 EVI5O60447 810 aa6.25□□□□□ -1.41
SNORA40.19-201ENST00000390846 CAMK2BQ13554 666 aa6.25□□□□□ -1.41
SNORA40.19-201ENST00000390846 PPP4R3BQ5MIZ7 849 aa6.25□□□□□ -1.41
SNORA40.19-201ENST00000390846 LARP6Q9BRS8 491 aaKnown RBP6.25□□□□□ -1.41
SNORA40.19-201ENST00000390846 PDE4AP27815 886 aa6.24□□□□□ -1.41
SNORA40.19-201ENST00000390846 ZNF454Q8N9F8 522 aa6.24□□□□□ -1.41
SNORA40.19-201ENST00000390846 PCDHGA10Q9Y5H3 936 aa6.24□□□□□ -1.41
SNORA40.19-201ENST00000390846 TBC1D12O60347 775 aa6.23□□□□□ -1.41
SNORA40.19-201ENST00000390846 COL9A1P20849 921 aa6.23□□□□□ -1.41
SNORA40.19-201ENST00000390846 JPH4Q96JJ6 628 aa6.23□□□□□ -1.41
SNORA40.19-201ENST00000390846 HCSTQ9UBK5 93 aa6.23□□□□□ -1.41
SNORA40.19-201ENST00000390846 DDX27Q96GQ7 796 aaKnown RBP6.22□□□□□ -1.41
SNORA40.19-201ENST00000390846 PLA2G2EQ9NZK7 142 aa6.22□□□□□ -1.41
SNORA40.19-201ENST00000390846 KCTD12Q96CX2 325 aaKnown RBP6.2□□□□□ -1.42
SNORA40.19-201ENST00000390846 PRIM1P49642 420 aaKnown RBP6.19□□□□□ -1.42
SNORA40.19-201ENST00000390846 ZDHHC16Q969W1 377 aa6.19□□□□□ -1.42
SNORA40.19-201ENST00000390846 RYDENQ9NUL5 291 aaKnown RBP6.19□□□□□ -1.42
SNORA40.19-201ENST00000390846 PROX2Q3B8N5 592 aa6.18□□□□□ -1.42
SNORA40.19-201ENST00000390846 THSD4Q6ZMP0 1018 aa6.17□□□□□ -1.42
SNORA40.19-201ENST00000390846 IFFO2Q5TF58 517 aa6.16□□□□□ -1.42
SNORA40.19-201ENST00000390846 C3orf80F5H4A9 247 aa6.15□□□□□ -1.42
SNORA40.19-201ENST00000390846 PTPREP23469 700 aa6.15□□□□□ -1.42
SNORA40.19-201ENST00000390846 PPP1R3GB7ZBB8 358 aa6.13□□□□□ -1.43
SNORA40.19-201ENST00000390846 DPYSL4O14531 572 aa6.13□□□□□ -1.43
SNORA40.19-201ENST00000390846 PHF14O94880 888 aa6.13□□□□□ -1.43
SNORA40.19-201ENST00000390846 MAP3K9P80192 1104 aa6.13□□□□□ -1.43
SNORA40.19-201ENST00000390846 PTPN5P54829 565 aa6.12□□□□□ -1.43
SNORA40.19-201ENST00000390846 FAM198AQ9UFP1 575 aa6.12□□□□□ -1.43
SNORA40.19-201ENST00000390846 C6orf132Q5T0Z8 1188 aa6.11□□□□□ -1.43
SNORA40.19-201ENST00000390846 RABGEF1Q9UJ41 708 aa6.11□□□□□ -1.43
SNORA40.19-201ENST00000390846 TYW1BQ6NUM6 668 aa6.1□□□□□ -1.43
SNORA40.19-201ENST00000390846 BBXQ8WY36 941 aaPredicted RBP6.1□□□□□ -1.43
SNORA40.19-201ENST00000390846 WNT2BQ93097 391 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms