RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KCTD12Q96CX2 325 aaKnown RBP0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 KIF12Q96FN5 646 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 ZSWIM6Q9HCJ5 1215 aa0.54□□□□□ -2.32
TRAJ28-201ENST00000390509 POTECB2RU33 542 aa0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 KCNMA1Q12791 1236 aa0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 NFX1Q12986 1120 aaKnown RBP0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 ADGRD1Q6QNK2 874 aa0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 L3MBTL3Q96JM7 780 aaPredicted RBP0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 STAC3Q96MF2 364 aa0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 PDZRN3Q9UPQ7 1066 aa0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 CCDC61Q9Y6R9 512 aa0.53□□□□□ -2.32
TRAJ28-201ENST00000390509 RNF225M0QZC1 329 aaPredicted RBP0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 TK2O00142 265 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 MAP3K13O43283 966 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 ADAM23O75077 832 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 GDF11O95390 407 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 ITGBL1O95965 494 aaPredicted RBP0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 PTPN5P54829 565 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 FOXK2Q01167 660 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 PKDCCQ504Y2 493 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 GPAT2Q6NUI2 795 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 TMEM106CQ9BVX2 250 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 TSPYL2Q9H2G4 693 aaPredicted RBP0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 STAG3Q9UJ98 1225 aa0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 DNMT3AQ9Y6K1 912 aaPredicted RBP0.52□□□□□ -2.33
TRAJ28-201ENST00000390509 ZNF316A6NFI3 1004 aaPredicted RBP0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 DGAT1O75907 488 aa0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 YBX3P16989 372 aaKnown RBP eCLIP0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 GSK3AP49840 483 aa0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 MYT1Q01538 1121 aa0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 RASSF7Q02833 373 aa0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 SGIP1Q9BQI5 828 aa0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 PRKD2Q9BZL6 878 aa0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 V9GY48 417 aaPredicted RBP0.51□□□□□ -2.33
TRAJ28-201ENST00000390509 G3V3G9 751 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 K7ELQ4 463 aaPredicted RBP0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 TERTO14746 1132 aaKnown RBP0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 HRO43593 1189 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 RGS19P49795 217 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 MNX1P50219 401 aaPredicted RBP0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 LCE2CQ5TA81 110 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 DCAF8Q5TAQ9 597 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 GPR153Q6NV75 609 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 THSD4Q6ZMP0 1018 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 PDCD7Q8N8D1 485 aaKnown RBP0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 SLC16A10Q8TF71 515 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 PCDHB13Q9Y5F0 798 aa0.5□□□□□ -2.33
TRAJ28-201ENST00000390509 GOLGA8CPA6NN73 597 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 C11orf95C9JLR9 678 aaPredicted RBP0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 ARHGAP33O14559 1287 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 MSTNO14793 375 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 SLURP2P0DP57 97 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 GMPRP36959 345 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 KCNC4Q03721 635 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 KRTAP1-1Q07627 177 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 DMRTA1Q5VZB9 504 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 DPY19L2Q6NUT2 758 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 POTEEQ6S8J3 1075 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 LSRQ86X29 649 aaPredicted RBP0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 IRF7Q92985 503 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 AXIN2Q9Y2T1 843 aa0.49□□□□□ -2.33
TRAJ28-201ENST00000390509 ARID1BQ8NFD5 2236 aaPredicted RBP0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 PSDA5PKW4 1024 aaPredicted RBP0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 FAM187AA6NFU0 413 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 ST8SIA5O15466 376 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 GOLGA2Q08379 1002 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 MKRN4PQ13434 485 aaPredicted RBP0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 FZD5Q13467 585 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 ARSIQ5FYB1 569 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 NYAP1Q6ZVC0 841 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 IFNL1Q8IU54 200 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 GALNT6Q8NCL4 622 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 WNT2BQ93097 391 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 EHMT2Q96KQ7 1210 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 KCNH8Q96L42 1107 aa0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 GMPR2Q9P2T1 348 aaKnown RBP0.48□□□□□ -2.33
TRAJ28-201ENST00000390509 TXKP42681 527 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 MKRN3Q13064 507 aaKnown RBP0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 KANK3Q6NY19 840 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 CRIPAKQ8N1N5 446 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 CCER1Q8TC90 406 aaPredicted RBP0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 SPOCK3Q9BQ16 436 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 AAASQ9NRG9 546 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 BOLA1Q9Y3E2 137 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 OBSCNQ5VST9 7968 aa0.47□□□□□ -2.33
TRAJ28-201ENST00000390509 PAX4O43316 350 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 IRS1P35568 1242 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 PRR20EP86478 221 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 PRR20CP86479 221 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 PRR20DP86480 221 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 PRR20BP86481 221 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 PRR20AP86496 221 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 LCE5AQ5TCM9 118 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 TRIM67Q6ZTA4 783 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 NPAS3Q8IXF0 933 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 SENP2Q9HC62 589 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 VPS9D1Q9Y2B5 631 aa0.46□□□□□ -2.34
TRAJ28-201ENST00000390509 SCO2A0A1W2PP80 73 aa0.45□□□□□ -2.34
TRAJ28-201ENST00000390509 H3BM21 787 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms