RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 VGFO15240 615 aaPredicted RBP4.86□□□□□ -1.63
TRAV41-201ENST00000390468 SOX12O15370 315 aa4.86□□□□□ -1.63
TRAV41-201ENST00000390468 RNF166Q96A37 237 aaPredicted RBP4.86□□□□□ -1.63
TRAV41-201ENST00000390468 ARSIQ5FYB1 569 aa4.85□□□□□ -1.63
TRAV41-201ENST00000390468 KHSRPQ92945 711 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRAV41-201ENST00000390468 BCL11BQ9C0K0 894 aaPredicted RBP4.85□□□□□ -1.63
TRAV41-201ENST00000390468 STK24Q9Y6E0 443 aa4.85□□□□□ -1.63
TRAV41-201ENST00000390468 ANKRD13DQ6ZTN6 518 aa4.84□□□□□ -1.63
TRAV41-201ENST00000390468 MYT1LQ9UL68 1186 aa4.84□□□□□ -1.63
TRAV41-201ENST00000390468 STK25O00506 426 aa4.82□□□□□ -1.64
TRAV41-201ENST00000390468 NLRP6P59044 892 aa4.82□□□□□ -1.64
TRAV41-201ENST00000390468 GPR153Q6NV75 609 aa4.82□□□□□ -1.64
TRAV41-201ENST00000390468 ZNF687Q8N1G0 1237 aa4.81□□□□□ -1.64
TRAV41-201ENST00000390468 ZSWIM6Q9HCJ5 1215 aa4.81□□□□□ -1.64
TRAV41-201ENST00000390468 ECM2O94769 699 aaPredicted RBP4.8□□□□□ -1.64
TRAV41-201ENST00000390468 ZNF316A6NFI3 1004 aaPredicted RBP4.79□□□□□ -1.64
TRAV41-201ENST00000390468 NUDT7P0C024 238 aa4.79□□□□□ -1.64
TRAV41-201ENST00000390468 TAOK2Q9UL54 1235 aa4.79□□□□□ -1.64
TRAV41-201ENST00000390468 C2orf72A6NCS6 295 aa4.78□□□□□ -1.64
TRAV41-201ENST00000390468 FBXO22Q8NEZ5 403 aa4.78□□□□□ -1.64
TRAV41-201ENST00000390468 MFRPQ9BY79 579 aa4.78□□□□□ -1.64
TRAV41-201ENST00000390468 AXIN2Q9Y2T1 843 aa4.78□□□□□ -1.64
TRAV41-201ENST00000390468 LSM11P83369 360 aaKnown RBP eCLIP4.76□□□□□ -1.65
TRAV41-201ENST00000390468 TMC2Q8TDI7 906 aa4.76□□□□□ -1.65
TRAV41-201ENST00000390468 LHX6Q9UPM6 363 aa4.75□□□□□ -1.65
TRAV41-201ENST00000390468 RGL2O15211 777 aa4.74□□□□□ -1.65
TRAV41-201ENST00000390468 PCDHGA4Q9Y5G9 962 aa4.74□□□□□ -1.65
TRAV41-201ENST00000390468 PTGER2P43116 358 aa4.73□□□□□ -1.65
TRAV41-201ENST00000390468 KIF3CO14782 793 aa4.71□□□□□ -1.66
TRAV41-201ENST00000390468 PPP1R37O75864 691 aa4.71□□□□□ -1.66
TRAV41-201ENST00000390468 PBX2P40425 430 aa4.7□□□□□ -1.66
TRAV41-201ENST00000390468 PKD2Q13563 968 aa4.7□□□□□ -1.66
TRAV41-201ENST00000390468 POTEEQ6S8J3 1075 aa4.7□□□□□ -1.66
TRAV41-201ENST00000390468 MYT1Q01538 1121 aa4.69□□□□□ -1.66
TRAV41-201ENST00000390468 PSEN2P49810 448 aa4.68□□□□□ -1.66
TRAV41-201ENST00000390468 ADGRD1Q6QNK2 874 aa4.68□□□□□ -1.66
TRAV41-201ENST00000390468 PLA2G2EQ9NZK7 142 aa4.68□□□□□ -1.66
TRAV41-201ENST00000390468 ARHGAP33O14559 1287 aa4.67□□□□□ -1.66
TRAV41-201ENST00000390468 SLC34A2O95436 690 aa4.67□□□□□ -1.66
TRAV41-201ENST00000390468 STAC3Q96MF2 364 aa4.67□□□□□ -1.66
TRAV41-201ENST00000390468 DMRTA1Q5VZB9 504 aa4.66□□□□□ -1.66
TRAV41-201ENST00000390468 PLPP6Q8IY26 295 aa4.66□□□□□ -1.66
TRAV41-201ENST00000390468 KCTD12Q96CX2 325 aaKnown RBP4.66□□□□□ -1.66
TRAV41-201ENST00000390468 KCNK17Q96T54 332 aa4.66□□□□□ -1.66
TRAV41-201ENST00000390468 HCSTQ9UBK5 93 aa4.66□□□□□ -1.66
TRAV41-201ENST00000390468 PPP4R3BQ5MIZ7 849 aa4.65□□□□□ -1.67
TRAV41-201ENST00000390468 UPF1Q92900 1129 aaKnown RBP eCLIP4.65□□□□□ -1.67
TRAV41-201ENST00000390468 PSDA5PKW4 1024 aaPredicted RBP4.64□□□□□ -1.67
TRAV41-201ENST00000390468 DSG2Q14126 1118 aa4.64□□□□□ -1.67
TRAV41-201ENST00000390468 KCNH8Q96L42 1107 aa4.64□□□□□ -1.67
TRAV41-201ENST00000390468 TBC1D12O60347 775 aa4.63□□□□□ -1.67
TRAV41-201ENST00000390468 CHGAP10645 457 aaKnown RBP4.63□□□□□ -1.67
TRAV41-201ENST00000390468 PTPN5P54829 565 aa4.63□□□□□ -1.67
TRAV41-201ENST00000390468 ZCCHC6Q5VYS8 1495 aaKnown RBP4.62□□□□□ -1.67
TRAV41-201ENST00000390468 FOXK1P85037 733 aa4.62□□□□□ -1.67
TRAV41-201ENST00000390468 PTCD2Q8WV60 388 aaKnown RBP4.62□□□□□ -1.67
TRAV41-201ENST00000390468 ZNF454Q8N9F8 522 aa4.61□□□□□ -1.67
TRAV41-201ENST00000390468 GPHNQ9NQX3 736 aaPredicted RBP4.61□□□□□ -1.67
TRAV41-201ENST00000390468 TK2O00142 265 aa4.6□□□□□ -1.67
TRAV41-201ENST00000390468 HRO43593 1189 aa4.6□□□□□ -1.67
TRAV41-201ENST00000390468 HS6ST3Q8IZP7 471 aa4.6□□□□□ -1.67
TRAV41-201ENST00000390468 KDM4FA0A1W2PPD8 638 aa4.59□□□□□ -1.67
TRAV41-201ENST00000390468 GOLGA8CPA6NN73 597 aa4.58□□□□□ -1.68
TRAV41-201ENST00000390468 VPS9D1Q9Y2B5 631 aa4.57□□□□□ -1.68
TRAV41-201ENST00000390468 DCAF8L2P0C7V8 631 aa4.56□□□□□ -1.68
TRAV41-201ENST00000390468 NKX1-1Q15270 411 aaPredicted RBP4.56□□□□□ -1.68
TRAV41-201ENST00000390468 PPP1R15BQ5SWA1 713 aa4.56□□□□□ -1.68
TRAV41-201ENST00000390468 DCAF1Q9Y4B6 1507 aa4.56□□□□□ -1.68
TRAV41-201ENST00000390468 PTPREP23469 700 aa4.55□□□□□ -1.68
TRAV41-201ENST00000390468 AMER1Q5JTC6 1135 aaPredicted RBP4.55□□□□□ -1.68
TRAV41-201ENST00000390468 OXER1Q8TDS5 423 aa4.55□□□□□ -1.68
TRAV41-201ENST00000390468 ABCC9O60706 1549 aa4.55□□□□□ -1.68
TRAV41-201ENST00000390468 UNC13AQ9UPW8 1703 aa4.55□□□□□ -1.68
TRAV41-201ENST00000390468 MRPL50Q8N5N7 158 aaKnown RBP4.54□□□□□ -1.68
TRAV41-201ENST00000390468 WNT2BQ93097 391 aa4.54□□□□□ -1.68
TRAV41-201ENST00000390468 EVI5O60447 810 aa4.53□□□□□ -1.68
TRAV41-201ENST00000390468 THSD4Q6ZMP0 1018 aa4.53□□□□□ -1.68
TRAV41-201ENST00000390468 LARP6Q9BRS8 491 aaKnown RBP4.53□□□□□ -1.68
TRAV41-201ENST00000390468 BCL2L12Q9HB09 334 aa4.53□□□□□ -1.68
TRAV41-201ENST00000390468 TTBK1Q5TCY1 1321 aaPredicted RBP4.52□□□□□ -1.69
TRAV41-201ENST00000390468 NCKAP5LQ9HCH0 1330 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 SLC24A1O60721 1099 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 PDE4AP27815 886 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 FOSBP53539 338 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 MAP3K9P80192 1104 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 ADAM33Q9BZ11 813 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 CRISPLD2Q9H0B8 497 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 RTN4Q9NQC3 1192 aaKnown RBP4.52□□□□□ -1.69
TRAV41-201ENST00000390468 RYDENQ9NUL5 291 aaKnown RBP4.52□□□□□ -1.69
TRAV41-201ENST00000390468 NACADO15069 1562 aa4.52□□□□□ -1.69
TRAV41-201ENST00000390468 ZDHHC16Q969W1 377 aa4.51□□□□□ -1.69
TRAV41-201ENST00000390468 JPH4Q96JJ6 628 aa4.51□□□□□ -1.69
TRAV41-201ENST00000390468 ZBED2Q9BTP6 218 aa4.51□□□□□ -1.69
TRAV41-201ENST00000390468 NBPF3Q9H094 633 aa4.51□□□□□ -1.69
TRAV41-201ENST00000390468 RB1CC1Q8TDY2 1594 aa4.5□□□□□ -1.69
TRAV41-201ENST00000390468 PROX2Q3B8N5 592 aa4.5□□□□□ -1.69
TRAV41-201ENST00000390468 DDX27Q96GQ7 796 aaKnown RBP4.5□□□□□ -1.69
TRAV41-201ENST00000390468 IRX2Q9BZI1 471 aaPredicted RBP4.5□□□□□ -1.69
TRAV41-201ENST00000390468 MYO15BQ96JP2 1530 aa4.5□□□□□ -1.69
TRAV41-201ENST00000390468 BHMG1C9JSJ3 638 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms