RNA–Protein interactions for RNA: ENST00000390431.3

TRAV9-1-201, Transcript of T cell receptor alpha variable 9-1, humanhuman

APPRIS P1 BASIC

Gene TRAV9-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1-201ENST00000390431 DNAJC5Q9H3Z4 198 aa10.29□□□□□ -0.76
TRAV9-1-201ENST00000390431 KIF21AQ7Z4S6 1674 aa10.26□□□□□ -0.77
TRAV9-1-201ENST00000390431 ILDR1Q86SU0 546 aaPredicted RBP10.26□□□□□ -0.77
TRAV9-1-201ENST00000390431 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
TRAV9-1-201ENST00000390431 TOP2AP11388 1531 aaKnown RBP10.26□□□□□ -0.77
TRAV9-1-201ENST00000390431 RIOK3O14730 519 aaKnown RBP10.25□□□□□ -0.77
TRAV9-1-201ENST00000390431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.23□□□□□ -0.77
TRAV9-1-201ENST00000390431 ZFP91Q96JP5 570 aaPredicted RBP10.23□□□□□ -0.77
TRAV9-1-201ENST00000390431 CFTRP13569 1480 aa10.23□□□□□ -0.77
TRAV9-1-201ENST00000390431 G3V3G9 751 aa10.22□□□□□ -0.77
TRAV9-1-201ENST00000390431 PCDH10Q9P2E7 1040 aa10.22□□□□□ -0.77
TRAV9-1-201ENST00000390431 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
TRAV9-1-201ENST00000390431 MRC2Q9UBG0 1479 aa10.21□□□□□ -0.78
TRAV9-1-201ENST00000390431 SNPHO15079 494 aa10.2□□□□□ -0.78
TRAV9-1-201ENST00000390431 WDR62O43379 1518 aa10.19□□□□□ -0.78
TRAV9-1-201ENST00000390431 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
TRAV9-1-201ENST00000390431 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
TRAV9-1-201ENST00000390431 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
TRAV9-1-201ENST00000390431 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
TRAV9-1-201ENST00000390431 MARVELD3Q96A59 401 aa10.17□□□□□ -0.78
TRAV9-1-201ENST00000390431 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
TRAV9-1-201ENST00000390431 CCDC88BA6NC98 1476 aa10.13□□□□□ -0.79
TRAV9-1-201ENST00000390431 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
TRAV9-1-201ENST00000390431 PHF8Q9UPP1 1060 aa10.13□□□□□ -0.79
TRAV9-1-201ENST00000390431 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
TRAV9-1-201ENST00000390431 MS4A4AQ96JQ5 239 aa10.11□□□□□ -0.79
TRAV9-1-201ENST00000390431 SOX12O15370 315 aa10.1□□□□□ -0.79
TRAV9-1-201ENST00000390431 MICALL2Q8IY33 904 aa10.1□□□□□ -0.79
TRAV9-1-201ENST00000390431 STK24Q9Y6E0 443 aa10.1□□□□□ -0.79
TRAV9-1-201ENST00000390431 PRDM2Q13029 1718 aa10.1□□□□□ -0.79
TRAV9-1-201ENST00000390431 URB2Q14146 1524 aaKnown RBP10.09□□□□□ -0.79
TRAV9-1-201ENST00000390431 EMP3P54852 163 aa10.08□□□□□ -0.8
TRAV9-1-201ENST00000390431 PKD2Q13563 968 aa10.08□□□□□ -0.8
TRAV9-1-201ENST00000390431 STK25O00506 426 aa10.06□□□□□ -0.8
TRAV9-1-201ENST00000390431 RGL2O15211 777 aa10.06□□□□□ -0.8
TRAV9-1-201ENST00000390431 TAOK2Q9UL54 1235 aa10.06□□□□□ -0.8
TRAV9-1-201ENST00000390431 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
TRAV9-1-201ENST00000390431 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
TRAV9-1-201ENST00000390431 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
TRAV9-1-201ENST00000390431 NLRP6P59044 892 aa10.02□□□□□ -0.81
TRAV9-1-201ENST00000390431 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
TRAV9-1-201ENST00000390431 FBXO22Q8NEZ5 403 aa10.01□□□□□ -0.81
TRAV9-1-201ENST00000390431 ABCC8Q09428 1581 aa10.01□□□□□ -0.81
TRAV9-1-201ENST00000390431 POTEB3A0JP26 581 aa10□□□□□ -0.81
TRAV9-1-201ENST00000390431 POTEBQ6S5H4 581 aa10□□□□□ -0.81
TRAV9-1-201ENST00000390431 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
TRAV9-1-201ENST00000390431 MFRPQ9BY79 579 aa10□□□□□ -0.81
TRAV9-1-201ENST00000390431 TOPBP1Q92547 1522 aa10□□□□□ -0.81
TRAV9-1-201ENST00000390431 IFT140Q96RY7 1462 aa9.99□□□□□ -0.81
TRAV9-1-201ENST00000390431 DOK7Q18PE1 504 aa9.99□□□□□ -0.81
TRAV9-1-201ENST00000390431 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
TRAV9-1-201ENST00000390431 ZNF608Q9ULD9 1512 aaPredicted RBP9.94□□□□□ -0.82
TRAV9-1-201ENST00000390431 HOXB1P14653 301 aaPredicted RBP9.94□□□□□ -0.82
TRAV9-1-201ENST00000390431 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
TRAV9-1-201ENST00000390431 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
TRAV9-1-201ENST00000390431 ERBB3P21860 1342 aa9.91□□□□□ -0.82
TRAV9-1-201ENST00000390431 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
TRAV9-1-201ENST00000390431 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
TRAV9-1-201ENST00000390431 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
TRAV9-1-201ENST00000390431 POLA1P09884 1462 aaPredicted RBP9.9□□□□□ -0.83
TRAV9-1-201ENST00000390431 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
TRAV9-1-201ENST00000390431 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
TRAV9-1-201ENST00000390431 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
TRAV9-1-201ENST00000390431 SOGA1O94964 1423 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 C2orf72A6NCS6 295 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 PPP1R37O75864 691 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 CUX1P39880 1505 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAV9-1-201ENST00000390431 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
TRAV9-1-201ENST00000390431 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.83
TRAV9-1-201ENST00000390431 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
TRAV9-1-201ENST00000390431 FGD5Q6ZNL6 1462 aa9.84□□□□□ -0.83
TRAV9-1-201ENST00000390431 RAD54L2Q9Y4B4 1467 aa9.84□□□□□ -0.83
TRAV9-1-201ENST00000390431 KIF3CO14782 793 aa9.82□□□□□ -0.84
TRAV9-1-201ENST00000390431 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
TRAV9-1-201ENST00000390431 CHGAP10645 457 aaKnown RBP9.8□□□□□ -0.84
TRAV9-1-201ENST00000390431 HS6ST3Q8IZP7 471 aa9.8□□□□□ -0.84
TRAV9-1-201ENST00000390431 TMC2Q8TDI7 906 aa9.79□□□□□ -0.84
TRAV9-1-201ENST00000390431 CHD1O14646 1710 aa9.78□□□□□ -0.84
TRAV9-1-201ENST00000390431 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
TRAV9-1-201ENST00000390431 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
TRAV9-1-201ENST00000390431 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
TRAV9-1-201ENST00000390431 GRIN2BQ13224 1484 aa9.77□□□□□ -0.85
TRAV9-1-201ENST00000390431 MAGI1Q96QZ7 1491 aaPredicted RBP9.77□□□□□ -0.85
TRAV9-1-201ENST00000390431 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
TRAV9-1-201ENST00000390431 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
TRAV9-1-201ENST00000390431 SNAPC4Q5SXM2 1469 aa9.76□□□□□ -0.85
TRAV9-1-201ENST00000390431 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
TRAV9-1-201ENST00000390431 NUDT7P0C024 238 aa9.74□□□□□ -0.85
TRAV9-1-201ENST00000390431 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
TRAV9-1-201ENST00000390431 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
TRAV9-1-201ENST00000390431 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
TRAV9-1-201ENST00000390431 TOP2BQ02880 1626 aa9.73□□□□□ -0.85
TRAV9-1-201ENST00000390431 ABCA5Q8WWZ7 1642 aa9.73□□□□□ -0.85
TRAV9-1-201ENST00000390431 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
TRAV9-1-201ENST00000390431 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
TRAV9-1-201ENST00000390431 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms