RNA–Protein interactions for RNA: ENST00000384540.1

RNU6-601P-201, Transcript of RNA, U6 small nuclear 601, pseudogene, humanhuman

BASIC

Gene RNU6-601P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-601P-201ENST00000384540 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
RNU6-601P-201ENST00000384540 RIMBP2O15034 1052 aa8.35□□□□□ -1.07
RNU6-601P-201ENST00000384540 ZNF710Q8N1W2 664 aa8.35□□□□□ -1.07
RNU6-601P-201ENST00000384540 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
RNU6-601P-201ENST00000384540 EMP3P54852 163 aa8.34□□□□□ -1.07
RNU6-601P-201ENST00000384540 CDAN1Q8IWY9 1227 aa8.34□□□□□ -1.07
RNU6-601P-201ENST00000384540 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
RNU6-601P-201ENST00000384540 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
RNU6-601P-201ENST00000384540 AMER1Q5JTC6 1135 aaPredicted RBP8.33□□□□□ -1.08
RNU6-601P-201ENST00000384540 DCAF8L2P0C7V8 631 aa8.32□□□□□ -1.08
RNU6-601P-201ENST00000384540 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
RNU6-601P-201ENST00000384540 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
RNU6-601P-201ENST00000384540 FAM205CA6NFA0 338 aa8.28□□□□□ -1.08
RNU6-601P-201ENST00000384540 GPR153Q6NV75 609 aa8.28□□□□□ -1.08
RNU6-601P-201ENST00000384540 PLSCR2Q9NRY7 297 aa8.28□□□□□ -1.08
RNU6-601P-201ENST00000384540 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
RNU6-601P-201ENST00000384540 POTEB3A0JP26 581 aa8.26□□□□□ -1.09
RNU6-601P-201ENST00000384540 SLC34A2O95436 690 aa8.26□□□□□ -1.09
RNU6-601P-201ENST00000384540 POTEBQ6S5H4 581 aa8.26□□□□□ -1.09
RNU6-601P-201ENST00000384540 RTN4Q9NQC3 1192 aaKnown RBP8.25□□□□□ -1.09
RNU6-601P-201ENST00000384540 FOXK1P85037 733 aa8.24□□□□□ -1.09
RNU6-601P-201ENST00000384540 GPHNQ9NQX3 736 aaPredicted RBP8.24□□□□□ -1.09
RNU6-601P-201ENST00000384540 ERBB3P21860 1342 aa8.23□□□□□ -1.09
RNU6-601P-201ENST00000384540 ARSIQ5FYB1 569 aa8.22□□□□□ -1.09
RNU6-601P-201ENST00000384540 CRISPLD2Q9H0B8 497 aa8.22□□□□□ -1.09
RNU6-601P-201ENST00000384540 DSG2Q14126 1118 aa8.2□□□□□ -1.1
RNU6-601P-201ENST00000384540 PLPP6Q8IY26 295 aa8.2□□□□□ -1.1
RNU6-601P-201ENST00000384540 KHSRPQ92945 711 aaKnown RBP eCLIP8.2□□□□□ -1.1
RNU6-601P-201ENST00000384540 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
RNU6-601P-201ENST00000384540 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
RNU6-601P-201ENST00000384540 PCDHGA4Q9Y5G9 962 aa8.2□□□□□ -1.1
RNU6-601P-201ENST00000384540 VARS2Q5ST30 1063 aaKnown RBP8.19□□□□□ -1.1
RNU6-601P-201ENST00000384540 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
RNU6-601P-201ENST00000384540 BBXQ8WY36 941 aaPredicted RBP8.18□□□□□ -1.1
RNU6-601P-201ENST00000384540 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
RNU6-601P-201ENST00000384540 NCKAP5LQ9HCH0 1330 aa8.17□□□□□ -1.1
RNU6-601P-201ENST00000384540 NUDT7P0C024 238 aa8.16□□□□□ -1.1
RNU6-601P-201ENST00000384540 ZNF687Q8N1G0 1237 aa8.16□□□□□ -1.1
RNU6-601P-201ENST00000384540 PDE4AP27815 886 aa8.15□□□□□ -1.1
RNU6-601P-201ENST00000384540 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
RNU6-601P-201ENST00000384540 KDM4FA0A1W2PPD8 638 aa8.13□□□□□ -1.11
RNU6-601P-201ENST00000384540 SPNS2Q8IVW8 549 aa8.13□□□□□ -1.11
RNU6-601P-201ENST00000384540 MFSD10Q14728 455 aa8.12□□□□□ -1.11
RNU6-601P-201ENST00000384540 LHX6Q9UPM6 363 aa8.12□□□□□ -1.11
RNU6-601P-201ENST00000384540 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
RNU6-601P-201ENST00000384540 TBC1D12O60347 775 aa8.1□□□□□ -1.11
RNU6-601P-201ENST00000384540 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
RNU6-601P-201ENST00000384540 DDX27Q96GQ7 796 aaKnown RBP8.1□□□□□ -1.11
RNU6-601P-201ENST00000384540 PSDA5PKW4 1024 aaPredicted RBP8.09□□□□□ -1.11
RNU6-601P-201ENST00000384540 MMRN1Q13201 1228 aa8.09□□□□□ -1.11
RNU6-601P-201ENST00000384540 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
RNU6-601P-201ENST00000384540 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
RNU6-601P-201ENST00000384540 PBX2P40425 430 aa8.07□□□□□ -1.12
RNU6-601P-201ENST00000384540 SPRYD3Q8NCJ5 442 aa8.06□□□□□ -1.12
RNU6-601P-201ENST00000384540 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNU6-601P-201ENST00000384540 POTEEQ6S8J3 1075 aa8.04□□□□□ -1.12
RNU6-601P-201ENST00000384540 LSM11P83369 360 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNU6-601P-201ENST00000384540 PPP4R3BQ5MIZ7 849 aa8.01□□□□□ -1.13
RNU6-601P-201ENST00000384540 PAXIP1Q6ZW49 1069 aaPredicted RBP8.01□□□□□ -1.13
RNU6-601P-201ENST00000384540 EMILIN3Q9NT22 766 aa8.01□□□□□ -1.13
RNU6-601P-201ENST00000384540 PTGER2P43116 358 aa8□□□□□ -1.13
RNU6-601P-201ENST00000384540 CAMK2BQ13554 666 aa8□□□□□ -1.13
RNU6-601P-201ENST00000384540 ARHGAP33O14559 1287 aa7.99□□□□□ -1.13
RNU6-601P-201ENST00000384540 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
RNU6-601P-201ENST00000384540 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
RNU6-601P-201ENST00000384540 EVI5O60447 810 aa7.98□□□□□ -1.13
RNU6-601P-201ENST00000384540 AXIN2Q9Y2T1 843 aa7.98□□□□□ -1.13
RNU6-601P-201ENST00000384540 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
RNU6-601P-201ENST00000384540 ANKRD13DQ6ZTN6 518 aa7.97□□□□□ -1.13
RNU6-601P-201ENST00000384540 FOSBP53539 338 aa7.96□□□□□ -1.14
RNU6-601P-201ENST00000384540 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.14
RNU6-601P-201ENST00000384540 JPH4Q96JJ6 628 aa7.96□□□□□ -1.14
RNU6-601P-201ENST00000384540 RNF166Q96A37 237 aaPredicted RBP7.95□□□□□ -1.14
RNU6-601P-201ENST00000384540 MYT1LQ9UL68 1186 aa7.95□□□□□ -1.14
RNU6-601P-201ENST00000384540 BCL2L12Q9HB09 334 aa7.94□□□□□ -1.14
RNU6-601P-201ENST00000384540 TK2O00142 265 aa7.93□□□□□ -1.14
RNU6-601P-201ENST00000384540 PSEN2P49810 448 aa7.93□□□□□ -1.14
RNU6-601P-201ENST00000384540 DMRTA1Q5VZB9 504 aa7.93□□□□□ -1.14
RNU6-601P-201ENST00000384540 ADGRD1Q6QNK2 874 aa7.92□□□□□ -1.14
RNU6-601P-201ENST00000384540 KCNH8Q96L42 1107 aa7.92□□□□□ -1.14
RNU6-601P-201ENST00000384540 DPYSL4O14531 572 aa7.91□□□□□ -1.14
RNU6-601P-201ENST00000384540 KCNK17Q96T54 332 aa7.91□□□□□ -1.14
RNU6-601P-201ENST00000384540 ZDHHC16Q969W1 377 aa7.9□□□□□ -1.14
RNU6-601P-201ENST00000384540 HRO43593 1189 aa7.89□□□□□ -1.15
RNU6-601P-201ENST00000384540 PHF14O94880 888 aa7.88□□□□□ -1.15
RNU6-601P-201ENST00000384540 PTPREP23469 700 aa7.88□□□□□ -1.15
RNU6-601P-201ENST00000384540 SLC4A5Q9BY07 1137 aa7.88□□□□□ -1.15
RNU6-601P-201ENST00000384540 ADAM33Q9BZ11 813 aa7.88□□□□□ -1.15
RNU6-601P-201ENST00000384540 PCDHGA10Q9Y5H3 936 aa7.88□□□□□ -1.15
RNU6-601P-201ENST00000384540 PDIA6Q15084 440 aa7.87□□□□□ -1.15
RNU6-601P-201ENST00000384540 E2F4Q16254 413 aa7.87□□□□□ -1.15
RNU6-601P-201ENST00000384540 ARIH1Q9Y4X5 557 aaPredicted RBP7.87□□□□□ -1.15
RNU6-601P-201ENST00000384540 TYW1BQ6NUM6 668 aa7.86□□□□□ -1.15
RNU6-601P-201ENST00000384540 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
RNU6-601P-201ENST00000384540 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
RNU6-601P-201ENST00000384540 EPAS1Q99814 870 aa7.85□□□□□ -1.15
RNU6-601P-201ENST00000384540 VPS9D1Q9Y2B5 631 aa7.85□□□□□ -1.15
RNU6-601P-201ENST00000384540 SPDYE16A6NNV3 312 aaPredicted RBP7.84□□□□□ -1.15
RNU6-601P-201ENST00000384540 ZBED2Q9BTP6 218 aa7.84□□□□□ -1.15
RNU6-601P-201ENST00000384540 PPP1R3GB7ZBB8 358 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms