RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 POTEBQ6S5H4 581 aa8.58□□□□□ -1.04
RNU6-1040P-201ENST00000383974 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
RNU6-1040P-201ENST00000383974 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
RNU6-1040P-201ENST00000383974 RIMBP2O15034 1052 aa8.55□□□□□ -1.04
RNU6-1040P-201ENST00000383974 HS6ST3Q8IZP7 471 aa8.52□□□□□ -1.05
RNU6-1040P-201ENST00000383974 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
RNU6-1040P-201ENST00000383974 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
RNU6-1040P-201ENST00000383974 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
RNU6-1040P-201ENST00000383974 ERBB3P21860 1342 aa8.5□□□□□ -1.05
RNU6-1040P-201ENST00000383974 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
RNU6-1040P-201ENST00000383974 KIF3CO14782 793 aa8.49□□□□□ -1.05
RNU6-1040P-201ENST00000383974 PPP1R37O75864 691 aa8.49□□□□□ -1.05
RNU6-1040P-201ENST00000383974 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
RNU6-1040P-201ENST00000383974 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
RNU6-1040P-201ENST00000383974 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
RNU6-1040P-201ENST00000383974 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
RNU6-1040P-201ENST00000383974 MMRN1Q13201 1228 aa8.46□□□□□ -1.06
RNU6-1040P-201ENST00000383974 ARSIQ5FYB1 569 aa8.45□□□□□ -1.06
RNU6-1040P-201ENST00000383974 TMC2Q8TDI7 906 aa8.44□□□□□ -1.06
RNU6-1040P-201ENST00000383974 KHSRPQ92945 711 aaKnown RBP eCLIP8.44□□□□□ -1.06
RNU6-1040P-201ENST00000383974 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
RNU6-1040P-201ENST00000383974 DNAJC5Q9H3Z4 198 aa8.39□□□□□ -1.07
RNU6-1040P-201ENST00000383974 ZNF687Q8N1G0 1237 aa8.38□□□□□ -1.07
RNU6-1040P-201ENST00000383974 ZNF316A6NFI3 1004 aaPredicted RBP8.37□□□□□ -1.07
RNU6-1040P-201ENST00000383974 SLC34A2O95436 690 aa8.37□□□□□ -1.07
RNU6-1040P-201ENST00000383974 NUDT7P0C024 238 aa8.37□□□□□ -1.07
RNU6-1040P-201ENST00000383974 PCDHGA4Q9Y5G9 962 aa8.37□□□□□ -1.07
RNU6-1040P-201ENST00000383974 FOXK1P85037 733 aa8.34□□□□□ -1.07
RNU6-1040P-201ENST00000383974 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
RNU6-1040P-201ENST00000383974 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
RNU6-1040P-201ENST00000383974 DSG2Q14126 1118 aa8.32□□□□□ -1.08
RNU6-1040P-201ENST00000383974 DCAF8L2P0C7V8 631 aa8.31□□□□□ -1.08
RNU6-1040P-201ENST00000383974 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
RNU6-1040P-201ENST00000383974 LHX6Q9UPM6 363 aa8.31□□□□□ -1.08
RNU6-1040P-201ENST00000383974 PTCD2Q8WV60 388 aaKnown RBP8.3□□□□□ -1.08
RNU6-1040P-201ENST00000383974 KDM4FA0A1W2PPD8 638 aa8.27□□□□□ -1.09
RNU6-1040P-201ENST00000383974 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1040P-201ENST00000383974 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
RNU6-1040P-201ENST00000383974 POTEEQ6S8J3 1075 aa8.26□□□□□ -1.09
RNU6-1040P-201ENST00000383974 ANKRD13DQ6ZTN6 518 aa8.26□□□□□ -1.09
RNU6-1040P-201ENST00000383974 RNF166Q96A37 237 aaPredicted RBP8.26□□□□□ -1.09
RNU6-1040P-201ENST00000383974 CRISPLD2Q9H0B8 497 aa8.26□□□□□ -1.09
RNU6-1040P-201ENST00000383974 MYT1LQ9UL68 1186 aa8.25□□□□□ -1.09
RNU6-1040P-201ENST00000383974 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
RNU6-1040P-201ENST00000383974 NCKAP5LQ9HCH0 1330 aa8.25□□□□□ -1.09
RNU6-1040P-201ENST00000383974 PBX2P40425 430 aa8.24□□□□□ -1.09
RNU6-1040P-201ENST00000383974 PSDA5PKW4 1024 aaPredicted RBP8.22□□□□□ -1.09
RNU6-1040P-201ENST00000383974 PTGER2P43116 358 aa8.22□□□□□ -1.09
RNU6-1040P-201ENST00000383974 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
RNU6-1040P-201ENST00000383974 TBC1D12O60347 775 aa8.21□□□□□ -1.1
RNU6-1040P-201ENST00000383974 UPF1Q92900 1129 aaKnown RBP eCLIP8.21□□□□□ -1.1
RNU6-1040P-201ENST00000383974 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
RNU6-1040P-201ENST00000383974 PDE4AP27815 886 aa8.18□□□□□ -1.1
RNU6-1040P-201ENST00000383974 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
RNU6-1040P-201ENST00000383974 ARHGAP33O14559 1287 aa8.17□□□□□ -1.1
RNU6-1040P-201ENST00000383974 LARP6Q9BRS8 491 aaKnown RBP8.17□□□□□ -1.1
RNU6-1040P-201ENST00000383974 DDX27Q96GQ7 796 aaKnown RBP8.16□□□□□ -1.1
RNU6-1040P-201ENST00000383974 PSEN2P49810 448 aa8.15□□□□□ -1.1
RNU6-1040P-201ENST00000383974 DMRTA1Q5VZB9 504 aa8.15□□□□□ -1.1
RNU6-1040P-201ENST00000383974 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
RNU6-1040P-201ENST00000383974 MFSD10Q14728 455 aa8.14□□□□□ -1.11
RNU6-1040P-201ENST00000383974 CADPS2Q86UW7 1296 aa8.14□□□□□ -1.11
RNU6-1040P-201ENST00000383974 ZNF454Q8N9F8 522 aa8.12□□□□□ -1.11
RNU6-1040P-201ENST00000383974 KCNK17Q96T54 332 aa8.12□□□□□ -1.11
RNU6-1040P-201ENST00000383974 TK2O00142 265 aa8.1□□□□□ -1.11
RNU6-1040P-201ENST00000383974 EVI5O60447 810 aa8.1□□□□□ -1.11
RNU6-1040P-201ENST00000383974 KCNH8Q96L42 1107 aa8.09□□□□□ -1.11
RNU6-1040P-201ENST00000383974 EMILIN3Q9NT22 766 aa8.09□□□□□ -1.11
RNU6-1040P-201ENST00000383974 HRO43593 1189 aa8.08□□□□□ -1.12
RNU6-1040P-201ENST00000383974 FOSBP53539 338 aa8.08□□□□□ -1.12
RNU6-1040P-201ENST00000383974 BBXQ8WY36 941 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1040P-201ENST00000383974 AMER1Q5JTC6 1135 aaPredicted RBP8.07□□□□□ -1.12
RNU6-1040P-201ENST00000383974 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
RNU6-1040P-201ENST00000383974 BCL2L12Q9HB09 334 aa8.07□□□□□ -1.12
RNU6-1040P-201ENST00000383974 ANO8Q9HCE9 1232 aaPredicted RBP8.07□□□□□ -1.12
RNU6-1040P-201ENST00000383974 MAP3K9P80192 1104 aa8.06□□□□□ -1.12
RNU6-1040P-201ENST00000383974 RTN4Q9NQC3 1192 aaKnown RBP8.06□□□□□ -1.12
RNU6-1040P-201ENST00000383974 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
RNU6-1040P-201ENST00000383974 PTPREP23469 700 aa8.03□□□□□ -1.12
RNU6-1040P-201ENST00000383974 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
RNU6-1040P-201ENST00000383974 ADAM33Q9BZ11 813 aa8.03□□□□□ -1.12
RNU6-1040P-201ENST00000383974 CAMK2BQ13554 666 aa8.01□□□□□ -1.13
RNU6-1040P-201ENST00000383974 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
RNU6-1040P-201ENST00000383974 KCTD12Q96CX2 325 aaKnown RBP8□□□□□ -1.13
RNU6-1040P-201ENST00000383974 STAC3Q96MF2 364 aa8□□□□□ -1.13
RNU6-1040P-201ENST00000383974 SLC4A5Q9BY07 1137 aa8□□□□□ -1.13
RNU6-1040P-201ENST00000383974 PCDHGA10Q9Y5H3 936 aa8□□□□□ -1.13
RNU6-1040P-201ENST00000383974 DPYSL4O14531 572 aa7.99□□□□□ -1.13
RNU6-1040P-201ENST00000383974 SPRYD3Q8NCJ5 442 aa7.99□□□□□ -1.13
RNU6-1040P-201ENST00000383974 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
RNU6-1040P-201ENST00000383974 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
RNU6-1040P-201ENST00000383974 BHMG1C9JSJ3 638 aaPredicted RBP7.96□□□□□ -1.14
RNU6-1040P-201ENST00000383974 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
RNU6-1040P-201ENST00000383974 PHF14O94880 888 aa7.95□□□□□ -1.14
RNU6-1040P-201ENST00000383974 TYW1BQ6NUM6 668 aa7.95□□□□□ -1.14
RNU6-1040P-201ENST00000383974 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
RNU6-1040P-201ENST00000383974 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
RNU6-1040P-201ENST00000383974 COL9A1P20849 921 aa7.93□□□□□ -1.14
RNU6-1040P-201ENST00000383974 PAXIP1Q6ZW49 1069 aaPredicted RBP7.93□□□□□ -1.14
RNU6-1040P-201ENST00000383974 CFAP44Q96MT7 982 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms