RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 KDM6BO15054 1643 aa17.93■□□□□ 0.46
PUDP-201ENST00000381077 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
PUDP-201ENST00000381077 GPATCH8Q9UKJ3 1502 aaKnown RBP17.91■□□□□ 0.46
PUDP-201ENST00000381077 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
PUDP-201ENST00000381077 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
PUDP-201ENST00000381077 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
PUDP-201ENST00000381077 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
PUDP-201ENST00000381077 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
PUDP-201ENST00000381077 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
PUDP-201ENST00000381077 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
PUDP-201ENST00000381077 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
PUDP-201ENST00000381077 TRIM52Q96A61 297 aa17.87■□□□□ 0.45
PUDP-201ENST00000381077 SHANK2Q9UPX8 1470 aa17.87■□□□□ 0.45
PUDP-201ENST00000381077 KIF14Q15058 1648 aa17.87■□□□□ 0.45
PUDP-201ENST00000381077 ANKRD30BQ9BXX2 1392 aa17.86■□□□□ 0.45
PUDP-201ENST00000381077 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
PUDP-201ENST00000381077 ANP32CO43423 234 aa17.84■□□□□ 0.45
PUDP-201ENST00000381077 CFDP1Q9UEE9 299 aaPredicted RBP17.84■□□□□ 0.45
PUDP-201ENST00000381077 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.44
PUDP-201ENST00000381077 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
PUDP-201ENST00000381077 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
PUDP-201ENST00000381077 PLEKHD1A6NEE1 506 aa17.8■□□□□ 0.44
PUDP-201ENST00000381077 ATP10BO94823 1461 aa17.8■□□□□ 0.44
PUDP-201ENST00000381077 TEX14Q8IWB6 1497 aa17.8■□□□□ 0.44
PUDP-201ENST00000381077 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
PUDP-201ENST00000381077 ARHGEF5Q12774 1597 aa17.78■□□□□ 0.44
PUDP-201ENST00000381077 PZPP20742 1482 aa17.78■□□□□ 0.44
PUDP-201ENST00000381077 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.44
PUDP-201ENST00000381077 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
PUDP-201ENST00000381077 FBLN2P98095 1184 aa17.77■□□□□ 0.43
PUDP-201ENST00000381077 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
PUDP-201ENST00000381077 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
PUDP-201ENST00000381077 KIAA1107Q9UPP5 1409 aa17.74■□□□□ 0.43
PUDP-201ENST00000381077 L3MBTL2Q969R5 705 aa17.74■□□□□ 0.43
PUDP-201ENST00000381077 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
PUDP-201ENST00000381077 POLR1AO95602 1720 aaPredicted RBP17.74■□□□□ 0.43
PUDP-201ENST00000381077 PTPRGP23470 1445 aa17.73■□□□□ 0.43
PUDP-201ENST00000381077 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
PUDP-201ENST00000381077 ANKRD50Q9ULJ7 1429 aa17.72■□□□□ 0.43
PUDP-201ENST00000381077 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
PUDP-201ENST00000381077 C9orf84Q5VXU9 1444 aa17.71■□□□□ 0.42
PUDP-201ENST00000381077 MBD5Q9P267 1494 aa17.7■□□□□ 0.42
PUDP-201ENST00000381077 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
PUDP-201ENST00000381077 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
PUDP-201ENST00000381077 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
PUDP-201ENST00000381077 HIRIP3Q9BW71 556 aaPredicted RBP17.68■□□□□ 0.42
PUDP-201ENST00000381077 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
PUDP-201ENST00000381077 CHD1O14646 1710 aa17.68■□□□□ 0.42
PUDP-201ENST00000381077 WASHC2AQ641Q2 1341 aa17.67■□□□□ 0.42
PUDP-201ENST00000381077 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
PUDP-201ENST00000381077 ARHGEF12Q9NZN5 1544 aa17.66■□□□□ 0.42
PUDP-201ENST00000381077 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
PUDP-201ENST00000381077 CCDC141Q6ZP82 1450 aa17.65■□□□□ 0.42
PUDP-201ENST00000381077 TSPY4P0CV99 314 aa17.65■□□□□ 0.42
PUDP-201ENST00000381077 TSPY10P0CW01 314 aa17.65■□□□□ 0.42
PUDP-201ENST00000381077 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
PUDP-201ENST00000381077 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
PUDP-201ENST00000381077 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
PUDP-201ENST00000381077 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
PUDP-201ENST00000381077 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
PUDP-201ENST00000381077 ARID4BQ4LE39 1312 aaPredicted RBP17.62■□□□□ 0.41
PUDP-201ENST00000381077 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
PUDP-201ENST00000381077 FOXD1Q16676 465 aa17.61■□□□□ 0.41
PUDP-201ENST00000381077 SAMD9LQ8IVG5 1584 aa17.61■□□□□ 0.41
PUDP-201ENST00000381077 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
PUDP-201ENST00000381077 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
PUDP-201ENST00000381077 PKD2Q13563 968 aa17.57■□□□□ 0.4
PUDP-201ENST00000381077 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
PUDP-201ENST00000381077 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
PUDP-201ENST00000381077 NUP155O75694 1391 aa17.56■□□□□ 0.4
PUDP-201ENST00000381077 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
PUDP-201ENST00000381077 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
PUDP-201ENST00000381077 UNC13BO14795 1591 aa17.54■□□□□ 0.4
PUDP-201ENST00000381077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.4
PUDP-201ENST00000381077 KDM5CP41229 1560 aa17.53■□□□□ 0.4
PUDP-201ENST00000381077 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
PUDP-201ENST00000381077 TTC37Q6PGP7 1564 aa17.51■□□□□ 0.39
PUDP-201ENST00000381077 ROCK2O75116 1388 aaKnown RBP17.51■□□□□ 0.39
PUDP-201ENST00000381077 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
PUDP-201ENST00000381077 ARHGAP5Q13017 1502 aa17.5■□□□□ 0.39
PUDP-201ENST00000381077 NEFLP07196 543 aa17.5■□□□□ 0.39
PUDP-201ENST00000381077 PRKRIP1Q9H875 184 aaPredicted RBP17.5■□□□□ 0.39
PUDP-201ENST00000381077 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
PUDP-201ENST00000381077 ARAP3Q8WWN8 1544 aa17.49■□□□□ 0.39
PUDP-201ENST00000381077 USP47Q96K76 1375 aa17.49■□□□□ 0.39
PUDP-201ENST00000381077 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
PUDP-201ENST00000381077 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
PUDP-201ENST00000381077 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
PUDP-201ENST00000381077 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
PUDP-201ENST00000381077 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
PUDP-201ENST00000381077 MAGI2Q86UL8 1455 aa17.46■□□□□ 0.39
PUDP-201ENST00000381077 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
PUDP-201ENST00000381077 PLCH2O75038 1416 aa17.45■□□□□ 0.38
PUDP-201ENST00000381077 ATP10AO60312 1499 aa17.45■□□□□ 0.38
PUDP-201ENST00000381077 ZCCHC11Q5TAX3 1644 aaKnown RBP17.44■□□□□ 0.38
PUDP-201ENST00000381077 LAMC1P11047 1609 aa17.43■□□□□ 0.38
PUDP-201ENST00000381077 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
PUDP-201ENST00000381077 ERICH6BQ5W0A0 696 aa17.42■□□□□ 0.38
PUDP-201ENST00000381077 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
PUDP-201ENST00000381077 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms