RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
LCMT1-201ENST00000380962 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
LCMT1-201ENST00000380962 ATP10BO94823 1461 aa19.1■□□□□ 0.65
LCMT1-201ENST00000380962 ARID3CA6NKF2 412 aa19.1■□□□□ 0.65
LCMT1-201ENST00000380962 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
LCMT1-201ENST00000380962 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
LCMT1-201ENST00000380962 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
LCMT1-201ENST00000380962 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
LCMT1-201ENST00000380962 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
LCMT1-201ENST00000380962 KDM6BO15054 1643 aa19.08■□□□□ 0.64
LCMT1-201ENST00000380962 CROCC2H7BZ55 1655 aa19.07■□□□□ 0.64
LCMT1-201ENST00000380962 PLEKHD1A6NEE1 506 aa19.07■□□□□ 0.64
LCMT1-201ENST00000380962 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
LCMT1-201ENST00000380962 PTPRGP23470 1445 aa19.07■□□□□ 0.64
LCMT1-201ENST00000380962 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
LCMT1-201ENST00000380962 CHD1O14646 1710 aa19.06■□□□□ 0.64
LCMT1-201ENST00000380962 KDM5BQ9UGL1 1544 aa19.05■□□□□ 0.64
LCMT1-201ENST00000380962 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
LCMT1-201ENST00000380962 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
LCMT1-201ENST00000380962 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.64
LCMT1-201ENST00000380962 TRIM52Q96A61 297 aa19.01■□□□□ 0.63
LCMT1-201ENST00000380962 ZNF644Q9H582 1327 aaPredicted RBP19.01■□□□□ 0.63
LCMT1-201ENST00000380962 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
LCMT1-201ENST00000380962 ARHGEF5Q12774 1597 aa18.98■□□□□ 0.63
LCMT1-201ENST00000380962 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
LCMT1-201ENST00000380962 RPRD2Q5VT52 1461 aaKnown RBP18.96■□□□□ 0.63
LCMT1-201ENST00000380962 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
LCMT1-201ENST00000380962 PZPP20742 1482 aa18.93■□□□□ 0.62
LCMT1-201ENST00000380962 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
LCMT1-201ENST00000380962 CLASP1Q7Z460 1538 aa18.92■□□□□ 0.62
LCMT1-201ENST00000380962 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
LCMT1-201ENST00000380962 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
LCMT1-201ENST00000380962 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
LCMT1-201ENST00000380962 KDM5DQ9BY66 1539 aa18.91■□□□□ 0.62
LCMT1-201ENST00000380962 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
LCMT1-201ENST00000380962 UHRF1BP1LA0JNW5 1464 aa18.89■□□□□ 0.61
LCMT1-201ENST00000380962 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
LCMT1-201ENST00000380962 TEX14Q8IWB6 1497 aa18.88■□□□□ 0.61
LCMT1-201ENST00000380962 KIAA1107Q9UPP5 1409 aa18.88■□□□□ 0.61
LCMT1-201ENST00000380962 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
LCMT1-201ENST00000380962 MBD5Q9P267 1494 aa18.88■□□□□ 0.61
LCMT1-201ENST00000380962 CCDC141Q6ZP82 1450 aa18.87■□□□□ 0.61
LCMT1-201ENST00000380962 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
LCMT1-201ENST00000380962 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
LCMT1-201ENST00000380962 MAST1Q9Y2H9 1570 aa18.85■□□□□ 0.61
LCMT1-201ENST00000380962 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
LCMT1-201ENST00000380962 TSPY10P0CW01 314 aa18.84■□□□□ 0.61
LCMT1-201ENST00000380962 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
LCMT1-201ENST00000380962 CDC42BPBQ9Y5S2 1711 aa18.84■□□□□ 0.61
LCMT1-201ENST00000380962 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
LCMT1-201ENST00000380962 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
LCMT1-201ENST00000380962 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
LCMT1-201ENST00000380962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.8■□□□□ 0.6
LCMT1-201ENST00000380962 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
LCMT1-201ENST00000380962 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
LCMT1-201ENST00000380962 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
LCMT1-201ENST00000380962 ERCC6L2Q5T890 1561 aa18.8■□□□□ 0.6
LCMT1-201ENST00000380962 EIF4G2P78344 907 aaKnown RBP eCLIP18.79■□□□□ 0.6
LCMT1-201ENST00000380962 KIF15Q9NS87 1388 aa18.79■□□□□ 0.6
LCMT1-201ENST00000380962 TTC37Q6PGP7 1564 aa18.78■□□□□ 0.6
LCMT1-201ENST00000380962 MYO5CQ9NQX4 1742 aa18.78■□□□□ 0.6
LCMT1-201ENST00000380962 ANP32CO43423 234 aa18.77■□□□□ 0.6
LCMT1-201ENST00000380962 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
LCMT1-201ENST00000380962 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
LCMT1-201ENST00000380962 FOXD1Q16676 465 aa18.75■□□□□ 0.59
LCMT1-201ENST00000380962 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
LCMT1-201ENST00000380962 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
LCMT1-201ENST00000380962 ARAP3Q8WWN8 1544 aa18.74■□□□□ 0.59
LCMT1-201ENST00000380962 ARHGEF12Q9NZN5 1544 aa18.74■□□□□ 0.59
LCMT1-201ENST00000380962 NUP155O75694 1391 aa18.73■□□□□ 0.59
LCMT1-201ENST00000380962 PKD2Q13563 968 aa18.73■□□□□ 0.59
LCMT1-201ENST00000380962 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
LCMT1-201ENST00000380962 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.59
LCMT1-201ENST00000380962 PLCH2O75038 1416 aa18.72■□□□□ 0.59
LCMT1-201ENST00000380962 UHRF1BP1Q6BDS2 1440 aa18.71■□□□□ 0.59
LCMT1-201ENST00000380962 SPATA31E1Q6ZUB1 1445 aa18.71■□□□□ 0.59
LCMT1-201ENST00000380962 UNC13BO14795 1591 aa18.71■□□□□ 0.59
LCMT1-201ENST00000380962 HIRIP3Q9BW71 556 aaPredicted RBP18.7■□□□□ 0.58
LCMT1-201ENST00000380962 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
LCMT1-201ENST00000380962 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
LCMT1-201ENST00000380962 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
LCMT1-201ENST00000380962 DUOX2Q9NRD8 1548 aa18.66■□□□□ 0.58
LCMT1-201ENST00000380962 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
LCMT1-201ENST00000380962 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
LCMT1-201ENST00000380962 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
LCMT1-201ENST00000380962 ERBINQ96RT1 1412 aa18.65■□□□□ 0.58
LCMT1-201ENST00000380962 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
LCMT1-201ENST00000380962 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.58
LCMT1-201ENST00000380962 ABCC1P33527 1531 aa18.64■□□□□ 0.57
LCMT1-201ENST00000380962 MAGI2Q86UL8 1455 aa18.63■□□□□ 0.57
LCMT1-201ENST00000380962 RALGAPBQ86X10 1494 aa18.63■□□□□ 0.57
LCMT1-201ENST00000380962 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
LCMT1-201ENST00000380962 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
LCMT1-201ENST00000380962 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
LCMT1-201ENST00000380962 RTEL1-TNFRSF6BF6WH68 1400 aa18.6■□□□□ 0.57
LCMT1-201ENST00000380962 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
LCMT1-201ENST00000380962 ATP10AO60312 1499 aa18.59■□□□□ 0.57
LCMT1-201ENST00000380962 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
LCMT1-201ENST00000380962 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.57
LCMT1-201ENST00000380962 KDM5CP41229 1560 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms