RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
TNFSF13-203ENST00000380535 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
TNFSF13-203ENST00000380535 CFDP1Q9UEE9 299 aaPredicted RBP20.36■□□□□ 0.85
TNFSF13-203ENST00000380535 CAMSAP2Q08AD1 1489 aa20.36■□□□□ 0.85
TNFSF13-203ENST00000380535 ROCK1Q13464 1354 aa20.35■□□□□ 0.85
TNFSF13-203ENST00000380535 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
TNFSF13-203ENST00000380535 DAPK1P53355 1430 aa20.34■□□□□ 0.85
TNFSF13-203ENST00000380535 PTPRKQ15262 1439 aa20.33■□□□□ 0.85
TNFSF13-203ENST00000380535 CROCC2H7BZ55 1655 aa20.31■□□□□ 0.84
TNFSF13-203ENST00000380535 NAIPQ13075 1403 aa20.31■□□□□ 0.84
TNFSF13-203ENST00000380535 ADGBQ8N7X0 1667 aa20.31■□□□□ 0.84
TNFSF13-203ENST00000380535 MYO5CQ9NQX4 1742 aa20.3■□□□□ 0.84
TNFSF13-203ENST00000380535 ABCC5O15440 1437 aa20.28■□□□□ 0.84
TNFSF13-203ENST00000380535 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
TNFSF13-203ENST00000380535 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
TNFSF13-203ENST00000380535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.28■□□□□ 0.84
TNFSF13-203ENST00000380535 CDC42BPBQ9Y5S2 1711 aa20.27■□□□□ 0.84
TNFSF13-203ENST00000380535 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
TNFSF13-203ENST00000380535 ADGRL2O95490 1459 aa20.25■□□□□ 0.83
TNFSF13-203ENST00000380535 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
TNFSF13-203ENST00000380535 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
TNFSF13-203ENST00000380535 TTC37Q6PGP7 1564 aa20.24■□□□□ 0.83
TNFSF13-203ENST00000380535 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
TNFSF13-203ENST00000380535 ARHGAP5Q13017 1502 aa20.2■□□□□ 0.82
TNFSF13-203ENST00000380535 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
TNFSF13-203ENST00000380535 SAMD9LQ8IVG5 1584 aa20.19■□□□□ 0.82
TNFSF13-203ENST00000380535 PLCH2O75038 1416 aa20.18■□□□□ 0.82
TNFSF13-203ENST00000380535 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
TNFSF13-203ENST00000380535 MAPKBP1O60336 1514 aa20.18■□□□□ 0.82
TNFSF13-203ENST00000380535 ANKRD30AQ9BXX3 1397 aa20.18■□□□□ 0.82
TNFSF13-203ENST00000380535 NPM1P06748 294 aaKnown RBP eCLIP20.18■□□□□ 0.82
TNFSF13-203ENST00000380535 ZNF777Q9ULD5 760 aaPredicted RBP20.18■□□□□ 0.82
TNFSF13-203ENST00000380535 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
TNFSF13-203ENST00000380535 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
TNFSF13-203ENST00000380535 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
TNFSF13-203ENST00000380535 NCOA1Q15788 1441 aa20.15■□□□□ 0.82
TNFSF13-203ENST00000380535 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
TNFSF13-203ENST00000380535 TIMELESSQ9UNS1 1208 aa20.14■□□□□ 0.81
TNFSF13-203ENST00000380535 MBD5Q9P267 1494 aa20.14■□□□□ 0.81
TNFSF13-203ENST00000380535 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
TNFSF13-203ENST00000380535 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
TNFSF13-203ENST00000380535 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
TNFSF13-203ENST00000380535 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
TNFSF13-203ENST00000380535 C9orf84Q5VXU9 1444 aa20.13■□□□□ 0.81
TNFSF13-203ENST00000380535 ASXL2Q76L83 1435 aa20.11■□□□□ 0.81
TNFSF13-203ENST00000380535 EFCAB2Q5VUJ9 269 aa20.11■□□□□ 0.81
TNFSF13-203ENST00000380535 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
TNFSF13-203ENST00000380535 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.8
TNFSF13-203ENST00000380535 ABCC1P33527 1531 aa20.07■□□□□ 0.8
TNFSF13-203ENST00000380535 PLXNC1O60486 1568 aa20.06■□□□□ 0.8
TNFSF13-203ENST00000380535 KDM6BO15054 1643 aa20.06■□□□□ 0.8
TNFSF13-203ENST00000380535 CFAP74Q9C0B2 1584 aa20.05■□□□□ 0.8
TNFSF13-203ENST00000380535 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
TNFSF13-203ENST00000380535 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
TNFSF13-203ENST00000380535 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
TNFSF13-203ENST00000380535 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
TNFSF13-203ENST00000380535 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
TNFSF13-203ENST00000380535 ZNF316A6NFI3 1004 aaPredicted RBP20.02■□□□□ 0.8
TNFSF13-203ENST00000380535 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
TNFSF13-203ENST00000380535 KIF15Q9NS87 1388 aa19.99■□□□□ 0.79
TNFSF13-203ENST00000380535 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
TNFSF13-203ENST00000380535 FANCAO15360 1455 aa19.99■□□□□ 0.79
TNFSF13-203ENST00000380535 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
TNFSF13-203ENST00000380535 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
TNFSF13-203ENST00000380535 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
TNFSF13-203ENST00000380535 DUOX2Q9NRD8 1548 aa19.96■□□□□ 0.79
TNFSF13-203ENST00000380535 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
TNFSF13-203ENST00000380535 ERBINQ96RT1 1412 aa19.92■□□□□ 0.78
TNFSF13-203ENST00000380535 GLI2P10070 1586 aa19.92■□□□□ 0.78
TNFSF13-203ENST00000380535 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
TNFSF13-203ENST00000380535 CD109Q6YHK3 1445 aa19.9■□□□□ 0.78
TNFSF13-203ENST00000380535 ADGRL1O94910 1474 aa19.9■□□□□ 0.78
TNFSF13-203ENST00000380535 PZPP20742 1482 aa19.9■□□□□ 0.78
TNFSF13-203ENST00000380535 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
TNFSF13-203ENST00000380535 UNC13BO14795 1591 aa19.9■□□□□ 0.78
TNFSF13-203ENST00000380535 EIF5BO60841 1220 aaKnown RBP19.89■□□□□ 0.77
TNFSF13-203ENST00000380535 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
TNFSF13-203ENST00000380535 INO80Q9ULG1 1556 aaPredicted RBP19.88■□□□□ 0.77
TNFSF13-203ENST00000380535 NEO1Q92859 1461 aa19.88■□□□□ 0.77
TNFSF13-203ENST00000380535 TRAPPC8Q9Y2L5 1435 aa19.88■□□□□ 0.77
TNFSF13-203ENST00000380535 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
TNFSF13-203ENST00000380535 ZFYVE16Q7Z3T8 1539 aa19.87■□□□□ 0.77
TNFSF13-203ENST00000380535 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
TNFSF13-203ENST00000380535 SPAG9O60271 1321 aaKnown RBP19.86■□□□□ 0.77
TNFSF13-203ENST00000380535 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
TNFSF13-203ENST00000380535 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
TNFSF13-203ENST00000380535 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
TNFSF13-203ENST00000380535 MAP3K4Q9Y6R4 1608 aa19.85■□□□□ 0.77
TNFSF13-203ENST00000380535 ZNF518AQ6AHZ1 1483 aa19.85■□□□□ 0.77
TNFSF13-203ENST00000380535 SCAPERQ9BY12 1400 aa19.85■□□□□ 0.77
TNFSF13-203ENST00000380535 ATP7AQ04656 1500 aa19.84■□□□□ 0.77
TNFSF13-203ENST00000380535 NUP155O75694 1391 aa19.84■□□□□ 0.77
TNFSF13-203ENST00000380535 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
TNFSF13-203ENST00000380535 IQGAP3Q86VI3 1631 aa19.81■□□□□ 0.76
TNFSF13-203ENST00000380535 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
TNFSF13-203ENST00000380535 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
TNFSF13-203ENST00000380535 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
TNFSF13-203ENST00000380535 KDM5CP41229 1560 aa19.79■□□□□ 0.76
TNFSF13-203ENST00000380535 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
TNFSF13-203ENST00000380535 POGZQ7Z3K3 1410 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms