RNA–Protein interactions for RNA: ENST00000379803.5

SIN3B-202, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIN3B, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-202ENST00000379803 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
SIN3B-202ENST00000379803 BICRAQ9NZM4 1560 aa20.15■□□□□ 0.82
SIN3B-202ENST00000379803 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
SIN3B-202ENST00000379803 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
SIN3B-202ENST00000379803 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
SIN3B-202ENST00000379803 PTPRGP23470 1445 aa20.13■□□□□ 0.81
SIN3B-202ENST00000379803 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
SIN3B-202ENST00000379803 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
SIN3B-202ENST00000379803 OS9Q13438 667 aaPredicted RBP20.12■□□□□ 0.81
SIN3B-202ENST00000379803 NUP155O75694 1391 aa20.11■□□□□ 0.81
SIN3B-202ENST00000379803 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
SIN3B-202ENST00000379803 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
SIN3B-202ENST00000379803 SUPT16HQ9Y5B9 1047 aaKnown RBP20.07■□□□□ 0.8
SIN3B-202ENST00000379803 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
SIN3B-202ENST00000379803 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
SIN3B-202ENST00000379803 CC2D1BQ5T0F9 858 aaKnown RBP20.06■□□□□ 0.8
SIN3B-202ENST00000379803 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
SIN3B-202ENST00000379803 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.82e-7■■■■■ 64.8
SIN3B-202ENST00000379803 TERF2IPQ9NYB0 399 aa20.04■□□□□ 0.8
SIN3B-202ENST00000379803 CALD1Q05682 793 aaKnown RBP20.03■□□□□ 0.8
SIN3B-202ENST00000379803 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
SIN3B-202ENST00000379803 CFTRP13569 1480 aa20.01■□□□□ 0.79
SIN3B-202ENST00000379803 BECN1Q14457 450 aa20.01■□□□□ 0.79
SIN3B-202ENST00000379803 SETD5Q9C0A6 1442 aa20.01■□□□□ 0.79
SIN3B-202ENST00000379803 FAM69CQ0P6D2 419 aa19.99■□□□□ 0.79
SIN3B-202ENST00000379803 ZRSR1Q15695 479 aaKnown RBP19.99■□□□□ 0.79
SIN3B-202ENST00000379803 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
SIN3B-202ENST00000379803 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
SIN3B-202ENST00000379803 TSHZ2Q9NRE2 1034 aa19.97■□□□□ 0.79
SIN3B-202ENST00000379803 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
SIN3B-202ENST00000379803 FGD1P98174 961 aa19.95■□□□□ 0.78
SIN3B-202ENST00000379803 GOLGA6L22H0YM25 854 aa19.94■□□□□ 0.78
SIN3B-202ENST00000379803 FRAT1Q92837 279 aaPredicted RBP19.94■□□□□ 0.78
SIN3B-202ENST00000379803 KIF21BO75037 1637 aa19.94■□□□□ 0.78
SIN3B-202ENST00000379803 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
SIN3B-202ENST00000379803 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
SIN3B-202ENST00000379803 HDAC5Q9UQL6 1122 aa19.93■□□□□ 0.78
SIN3B-202ENST00000379803 ROCK2O75116 1388 aaKnown RBP19.92■□□□□ 0.78
SIN3B-202ENST00000379803 KCNJ4P48050 445 aa19.92■□□□□ 0.78
SIN3B-202ENST00000379803 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
SIN3B-202ENST00000379803 UACAQ9BZF9 1416 aa19.91■□□□□ 0.78
SIN3B-202ENST00000379803 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
SIN3B-202ENST00000379803 ZNF330Q9Y3S2 320 aaPredicted RBP19.9■□□□□ 0.78
SIN3B-202ENST00000379803 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
SIN3B-202ENST00000379803 TOP2BQ02880 1626 aa19.89■□□□□ 0.78
SIN3B-202ENST00000379803 AMPHP49418 695 aa19.89■□□□□ 0.77
SIN3B-202ENST00000379803 DDRGK1Q96HY6 314 aa19.88■□□□□ 0.77
SIN3B-202ENST00000379803 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
SIN3B-202ENST00000379803 IGF1RP08069 1367 aa19.87■□□□□ 0.77
SIN3B-202ENST00000379803 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
SIN3B-202ENST00000379803 IPO8O15397 1037 aaKnown RBP19.87■□□□□ 0.77
SIN3B-202ENST00000379803 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
SIN3B-202ENST00000379803 U2AF1L5P0DN76 240 aaPredicted RBP19.85■□□□□ 0.77
SIN3B-202ENST00000379803 U2AF1Q01081 240 aaKnown RBP eCLIP19.85■□□□□ 0.77
SIN3B-202ENST00000379803 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
SIN3B-202ENST00000379803 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
SIN3B-202ENST00000379803 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
SIN3B-202ENST00000379803 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
SIN3B-202ENST00000379803 EVA1CP58658 441 aa19.83■□□□□ 0.76
SIN3B-202ENST00000379803 STK31Q9BXU1 1019 aa19.83■□□□□ 0.76
SIN3B-202ENST00000379803 G3V3G9 751 aa19.82■□□□□ 0.76
SIN3B-202ENST00000379803 DCAF8Q5TAQ9 597 aa19.82■□□□□ 0.76
SIN3B-202ENST00000379803 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
SIN3B-202ENST00000379803 LMOD3Q0VAK6 560 aa19.81■□□□□ 0.76
SIN3B-202ENST00000379803 IRX6P78412 446 aaPredicted RBP19.8■□□□□ 0.76
SIN3B-202ENST00000379803 GTF2E1P29083 439 aaPredicted RBP19.8■□□□□ 0.76
SIN3B-202ENST00000379803 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
SIN3B-202ENST00000379803 FOXD1Q16676 465 aa19.79■□□□□ 0.76
SIN3B-202ENST00000379803 TULP1O00294 542 aaPredicted RBP19.78■□□□□ 0.76
SIN3B-202ENST00000379803 TAF7LQ5H9L4 462 aa19.76■□□□□ 0.75
SIN3B-202ENST00000379803 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
SIN3B-202ENST00000379803 RALBP1Q15311 655 aa19.76■□□□□ 0.75
SIN3B-202ENST00000379803 NAP1L2Q9ULW6 460 aaPredicted RBP19.76■□□□□ 0.75
SIN3B-202ENST00000379803 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
SIN3B-202ENST00000379803 CUX1P39880 1505 aa19.75■□□□□ 0.75
SIN3B-202ENST00000379803 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
SIN3B-202ENST00000379803 MCCP23508 829 aa19.75■□□□□ 0.75
SIN3B-202ENST00000379803 NUTM2FA1L443 756 aa19.74■□□□□ 0.75
SIN3B-202ENST00000379803 ATF3P18847 181 aa19.73■□□□□ 0.75
SIN3B-202ENST00000379803 TRAK1Q9UPV9 953 aa19.73■□□□□ 0.75
SIN3B-202ENST00000379803 GORABQ5T7V8 394 aa19.73■□□□□ 0.75
SIN3B-202ENST00000379803 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
SIN3B-202ENST00000379803 PRKCSHP14314 528 aaPredicted RBP19.72■□□□□ 0.75
SIN3B-202ENST00000379803 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
SIN3B-202ENST00000379803 PRXQ9BXM0 1461 aa19.71■□□□□ 0.75
SIN3B-202ENST00000379803 RBM19Q9Y4C8 960 aaKnown RBP19.7■□□□□ 0.74
SIN3B-202ENST00000379803 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
SIN3B-202ENST00000379803 COG3Q96JB2 828 aa19.69■□□□□ 0.74
SIN3B-202ENST00000379803 DCAF8L1A6NGE4 600 aa19.69■□□□□ 0.74
SIN3B-202ENST00000379803 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
SIN3B-202ENST00000379803 C1orf141Q5JVX7 400 aa19.68■□□□□ 0.74
SIN3B-202ENST00000379803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.67■□□□□ 0.74
SIN3B-202ENST00000379803 PSME1Q06323 249 aa19.67■□□□□ 0.74
SIN3B-202ENST00000379803 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
SIN3B-202ENST00000379803 TAOK2Q9UL54 1235 aa19.66■□□□□ 0.74
SIN3B-202ENST00000379803 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
SIN3B-202ENST00000379803 MSH5O43196 834 aa19.66■□□□□ 0.74
SIN3B-202ENST00000379803 STAC3Q96MF2 364 aa19.65■□□□□ 0.74
SIN3B-202ENST00000379803 CHMP3Q9Y3E7 222 aa19.65■□□□□ 0.74
SIN3B-202ENST00000379803 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms