RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
POLR2J3-201ENST00000379340 TCOF1Q13428 1488 aaKnown RBP15.37■□□□□ 0.05
POLR2J3-201ENST00000379340 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
POLR2J3-201ENST00000379340 MIA2Q96PC5 1412 aa15.36■□□□□ 0.05
POLR2J3-201ENST00000379340 CDK13Q14004 1512 aaKnown RBP15.35■□□□□ 0.05
POLR2J3-201ENST00000379340 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.05
POLR2J3-201ENST00000379340 FBXO41Q8TF61 875 aa15.33■□□□□ 0.05
POLR2J3-201ENST00000379340 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-201ENST00000379340 HFM1A2PYH4 1435 aa15.33■□□□□ 0.04
POLR2J3-201ENST00000379340 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
POLR2J3-201ENST00000379340 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
POLR2J3-201ENST00000379340 AKNAQ7Z591 1439 aa15.3■□□□□ 0.04
POLR2J3-201ENST00000379340 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
POLR2J3-201ENST00000379340 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
POLR2J3-201ENST00000379340 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
POLR2J3-201ENST00000379340 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
POLR2J3-201ENST00000379340 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
POLR2J3-201ENST00000379340 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
POLR2J3-201ENST00000379340 NAIPQ13075 1403 aa15.25■□□□□ 0.03
POLR2J3-201ENST00000379340 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-201ENST00000379340 ABCA8O94911 1581 aa15.24■□□□□ 0.03
POLR2J3-201ENST00000379340 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
POLR2J3-201ENST00000379340 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.02
POLR2J3-201ENST00000379340 PTPRMP28827 1452 aa15.2■□□□□ 0.02
POLR2J3-201ENST00000379340 ROCK1Q13464 1354 aa15.18■□□□□ 0.02
POLR2J3-201ENST00000379340 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
POLR2J3-201ENST00000379340 DAPK1P53355 1430 aa15.16■□□□□ 0.02
POLR2J3-201ENST00000379340 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
POLR2J3-201ENST00000379340 ARAP3Q8WWN8 1544 aa15.15■□□□□ 0.02
POLR2J3-201ENST00000379340 KIF14Q15058 1648 aa15.15■□□□□ 0.02
POLR2J3-201ENST00000379340 ADGBQ8N7X0 1667 aa15.13■□□□□ 0.01
POLR2J3-201ENST00000379340 RAPGEF3O95398 923 aa15.12■□□□□ 0.01
POLR2J3-201ENST00000379340 LMTK3Q96Q04 1460 aa15.12■□□□□ 0.01
POLR2J3-201ENST00000379340 ATP10BO94823 1461 aa15.11■□□□□ 0.01
POLR2J3-201ENST00000379340 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
POLR2J3-201ENST00000379340 GPATCH8Q9UKJ3 1502 aaKnown RBP15.11■□□□□ 0.01
POLR2J3-201ENST00000379340 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
POLR2J3-201ENST00000379340 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
POLR2J3-201ENST00000379340 ABCC5O15440 1437 aa15.1■□□□□ 0.01
POLR2J3-201ENST00000379340 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
POLR2J3-201ENST00000379340 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0.01
POLR2J3-201ENST00000379340 CDC42BPAQ5VT25 1732 aa15.08■□□□□ 0.01
POLR2J3-201ENST00000379340 SIN3AQ96ST3 1273 aa15.08■□□□□ 0
POLR2J3-201ENST00000379340 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0
POLR2J3-201ENST00000379340 HSPA2P54652 639 aa15.07■□□□□ 0
POLR2J3-201ENST00000379340 RRP7BPQ9NSQ0 103 aa15.07■□□□□ 0
POLR2J3-201ENST00000379340 ADGRL2O95490 1459 aa15.07■□□□□ 0
POLR2J3-201ENST00000379340 CFDP1Q9UEE9 299 aaPredicted RBP15.07■□□□□ 0
POLR2J3-201ENST00000379340 TONSLQ96HA7 1378 aa15.06■□□□□ 0
POLR2J3-201ENST00000379340 CHIC2Q9UKJ5 165 aa15.06■□□□□ 0
POLR2J3-201ENST00000379340 NEUROD1Q13562 356 aa15.05■□□□□ -0
POLR2J3-201ENST00000379340 ABCA9Q8IUA7 1624 aa15.05■□□□□ -0
POLR2J3-201ENST00000379340 SHANK2Q9UPX8 1470 aa15.04■□□□□ -0
POLR2J3-201ENST00000379340 ARID4BQ4LE39 1312 aaPredicted RBP15.04■□□□□ -0
POLR2J3-201ENST00000379340 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
POLR2J3-201ENST00000379340 CENPBP07199 599 aaPredicted RBP15.03■□□□□ -0
POLR2J3-201ENST00000379340 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
POLR2J3-201ENST00000379340 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
POLR2J3-201ENST00000379340 ILDR2Q71H61 639 aa15.02■□□□□ -0
POLR2J3-201ENST00000379340 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
POLR2J3-201ENST00000379340 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
POLR2J3-201ENST00000379340 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
POLR2J3-201ENST00000379340 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
POLR2J3-201ENST00000379340 NEO1Q92859 1461 aa15□□□□□ -0.01
POLR2J3-201ENST00000379340 NCOA1Q15788 1441 aa14.99□□□□□ -0.01
POLR2J3-201ENST00000379340 TRIM52Q96A61 297 aa14.99□□□□□ -0.01
POLR2J3-201ENST00000379340 MIER1Q8N108 512 aa14.98□□□□□ -0.01
POLR2J3-201ENST00000379340 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
POLR2J3-201ENST00000379340 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
POLR2J3-201ENST00000379340 SIGLEC1Q9BZZ2 1709 aa14.98□□□□□ -0.01
POLR2J3-201ENST00000379340 MPHOSPH9Q99550 1183 aa14.97□□□□□ -0.01
POLR2J3-201ENST00000379340 ARHGEF40Q8TER5 1519 aa14.96□□□□□ -0.01
POLR2J3-201ENST00000379340 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
POLR2J3-201ENST00000379340 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-201ENST00000379340 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
POLR2J3-201ENST00000379340 MYO5CQ9NQX4 1742 aa14.93□□□□□ -0.02
POLR2J3-201ENST00000379340 C9orf84Q5VXU9 1444 aa14.93□□□□□ -0.02
POLR2J3-201ENST00000379340 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
POLR2J3-201ENST00000379340 DISP3Q9P2K9 1392 aa14.92□□□□□ -0.02
POLR2J3-201ENST00000379340 SAMD9LQ8IVG5 1584 aa14.92□□□□□ -0.02
POLR2J3-201ENST00000379340 YEATS2Q9ULM3 1422 aa14.92□□□□□ -0.02
POLR2J3-201ENST00000379340 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
POLR2J3-201ENST00000379340 PLEKHH2Q8IVE3 1493 aa14.91□□□□□ -0.02
POLR2J3-201ENST00000379340 MAST1Q9Y2H9 1570 aa14.91□□□□□ -0.02
POLR2J3-201ENST00000379340 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
POLR2J3-201ENST00000379340 PZPP20742 1482 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 RPRD2Q5VT52 1461 aaKnown RBP14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 KDM5DQ9BY66 1539 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 SOCS7O14512 581 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 MLECQ14165 292 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
POLR2J3-201ENST00000379340 TSPY4P0CV99 314 aa14.89□□□□□ -0.03
POLR2J3-201ENST00000379340 TSPY10P0CW01 314 aa14.89□□□□□ -0.03
POLR2J3-201ENST00000379340 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
POLR2J3-201ENST00000379340 ARHGAP5Q13017 1502 aa14.87□□□□□ -0.03
POLR2J3-201ENST00000379340 KIAA1107Q9UPP5 1409 aa14.86□□□□□ -0.03
POLR2J3-201ENST00000379340 FANCAO15360 1455 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms