RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 TONSLQ96HA7 1378 aa30.81■■■□□ 2.52
CNTFR-202ENST00000378980 GPATCH8Q9UKJ3 1502 aaKnown RBP30.8■■■□□ 2.52
CNTFR-202ENST00000378980 DENND4BO75064 1496 aaPredicted RBP30.8■■■□□ 2.52
CNTFR-202ENST00000378980 ZNF644Q9H582 1327 aaPredicted RBP30.79■■■□□ 2.52
CNTFR-202ENST00000378980 CAMSAP2Q08AD1 1489 aa30.79■■■□□ 2.52
CNTFR-202ENST00000378980 YTHDC1Q96MU7 727 aaKnown RBP30.75■■■□□ 2.51
CNTFR-202ENST00000378980 ATP10BO94823 1461 aa30.75■■■□□ 2.51
CNTFR-202ENST00000378980 ADGBQ8N7X0 1667 aa30.72■■■□□ 2.51
CNTFR-202ENST00000378980 TRIM52Q96A61 297 aa30.72■■■□□ 2.51
CNTFR-202ENST00000378980 CFDP1Q9UEE9 299 aaPredicted RBP30.72■■■□□ 2.51
CNTFR-202ENST00000378980 CROCC2H7BZ55 1655 aa30.72■■■□□ 2.51
CNTFR-202ENST00000378980 CDC42BPAQ5VT25 1732 aa30.71■■■□□ 2.51
CNTFR-202ENST00000378980 SHROOM2Q13796 1616 aa30.7■■■□□ 2.51
CNTFR-202ENST00000378980 KDM5BQ9UGL1 1544 aa30.7■■■□□ 2.51
CNTFR-202ENST00000378980 ABCC10Q5T3U5 1492 aa30.68■■■□□ 2.5
CNTFR-202ENST00000378980 PTPRGP23470 1445 aa30.67■■■□□ 2.5
CNTFR-202ENST00000378980 PLEKHD1A6NEE1 506 aa30.67■■■□□ 2.5
CNTFR-202ENST00000378980 MPHOSPH9Q99550 1183 aa30.65■■■□□ 2.5
CNTFR-202ENST00000378980 ADGRL2O95490 1459 aa30.63■■■□□ 2.49
CNTFR-202ENST00000378980 NCOA1Q15788 1441 aa30.58■■■□□ 2.49
CNTFR-202ENST00000378980 ZNF777Q9ULD5 760 aaPredicted RBP30.56■■■□□ 2.48
CNTFR-202ENST00000378980 GTF3C3Q9Y5Q9 886 aa30.56■■■□□ 2.48
CNTFR-202ENST00000378980 SHANK2Q9UPX8 1470 aa30.51■■■□□ 2.48
CNTFR-202ENST00000378980 ANKRD30BQ9BXX2 1392 aa30.49■■■□□ 2.47
CNTFR-202ENST00000378980 ANKRD30AQ9BXX3 1397 aa30.48■■■□□ 2.47
CNTFR-202ENST00000378980 ERCC6L2Q5T890 1561 aa30.47■■■□□ 2.47
CNTFR-202ENST00000378980 DDX10Q13206 875 aaKnown RBP30.47■■■□□ 2.47
CNTFR-202ENST00000378980 PZPP20742 1482 aa30.47■■■□□ 2.47
CNTFR-202ENST00000378980 HIRIP3Q9BW71 556 aaPredicted RBP30.46■■■□□ 2.47
CNTFR-202ENST00000378980 FOXD1Q16676 465 aa30.46■■■□□ 2.47
CNTFR-202ENST00000378980 RPRD2Q5VT52 1461 aaKnown RBP30.46■■■□□ 2.47
CNTFR-202ENST00000378980 PREX2Q70Z35 1606 aa30.46■■■□□ 2.47
CNTFR-202ENST00000378980 ARHGEF5Q12774 1597 aa30.44■■■□□ 2.46
CNTFR-202ENST00000378980 CDC42BPBQ9Y5S2 1711 aa30.43■■■□□ 2.46
CNTFR-202ENST00000378980 SLC4A1APQ9BWU0 796 aaKnown RBP30.43■■■□□ 2.46
CNTFR-202ENST00000378980 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
CNTFR-202ENST00000378980 ABCC2Q92887 1545 aa30.42■■■□□ 2.46
CNTFR-202ENST00000378980 C9orf84Q5VXU9 1444 aa30.42■■■□□ 2.46
CNTFR-202ENST00000378980 ANKRD50Q9ULJ7 1429 aa30.38■■■□□ 2.45
CNTFR-202ENST00000378980 SAMD9LQ8IVG5 1584 aa30.38■■■□□ 2.45
CNTFR-202ENST00000378980 TEX14Q8IWB6 1497 aa30.37■■■□□ 2.45
CNTFR-202ENST00000378980 L3MBTL2Q969R5 705 aa30.36■■■□□ 2.45
CNTFR-202ENST00000378980 MBD5Q9P267 1494 aa30.35■■■□□ 2.45
CNTFR-202ENST00000378980 TTC37Q6PGP7 1564 aa30.34■■■□□ 2.45
CNTFR-202ENST00000378980 KIAA1107Q9UPP5 1409 aa30.31■■■□□ 2.44
CNTFR-202ENST00000378980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.3■■■□□ 2.44
CNTFR-202ENST00000378980 CCDC141Q6ZP82 1450 aa30.3■■■□□ 2.44
CNTFR-202ENST00000378980 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
CNTFR-202ENST00000378980 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
CNTFR-202ENST00000378980 HNRNPMP52272 730 aaKnown RBP eCLIP30.27■■■□□ 2.44
CNTFR-202ENST00000378980 KDM5DQ9BY66 1539 aa30.27■■■□□ 2.44
CNTFR-202ENST00000378980 MYO5CQ9NQX4 1742 aa30.27■■■□□ 2.44
CNTFR-202ENST00000378980 ZCCHC11Q5TAX3 1644 aaKnown RBP30.24■■■□□ 2.43
CNTFR-202ENST00000378980 UHRF1BP1LA0JNW5 1464 aa30.24■■■□□ 2.43
CNTFR-202ENST00000378980 KIF15Q9NS87 1388 aa30.24■■■□□ 2.43
CNTFR-202ENST00000378980 ARHGAP5Q13017 1502 aa30.23■■■□□ 2.43
CNTFR-202ENST00000378980 HSPA5P11021 654 aaKnown RBP30.23■■■□□ 2.43
CNTFR-202ENST00000378980 KCNH8Q96L42 1107 aa30.22■■■□□ 2.43
CNTFR-202ENST00000378980 SYCP2Q9BX26 1530 aa30.21■■■□□ 2.43
CNTFR-202ENST00000378980 RSPH4AQ5TD94 716 aa30.21■■■□□ 2.43
CNTFR-202ENST00000378980 EIF4G2P78344 907 aaKnown RBP eCLIP30.2■■■□□ 2.43
CNTFR-202ENST00000378980 MAST1Q9Y2H9 1570 aa30.2■■■□□ 2.42
CNTFR-202ENST00000378980 PKD2Q13563 968 aa30.19■■■□□ 2.42
CNTFR-202ENST00000378980 NUP155O75694 1391 aa30.18■■■□□ 2.42
CNTFR-202ENST00000378980 ANP32CO43423 234 aa30.17■■■□□ 2.42
CNTFR-202ENST00000378980 NBPF8Q3BBV2 869 aa30.17■■■□□ 2.42
CNTFR-202ENST00000378980 CCER2I3L3R5 266 aa30.14■■■□□ 2.42
CNTFR-202ENST00000378980 PLEKHH2Q8IVE3 1493 aa30.14■■■□□ 2.41
CNTFR-202ENST00000378980 WASHC2AQ641Q2 1341 aa30.12■■■□□ 2.41
CNTFR-202ENST00000378980 PLXNC1O60486 1568 aa30.09■■■□□ 2.41
CNTFR-202ENST00000378980 PLCH2O75038 1416 aa30.06■■■□□ 2.4
CNTFR-202ENST00000378980 POLR1AO95602 1720 aaPredicted RBP30.05■■■□□ 2.4
CNTFR-202ENST00000378980 SPATA31E1Q6ZUB1 1445 aa30.05■■■□□ 2.4
CNTFR-202ENST00000378980 UNC13BO14795 1591 aa30.04■■■□□ 2.4
CNTFR-202ENST00000378980 FAM135AQ9P2D6 1515 aa30.04■■■□□ 2.4
CNTFR-202ENST00000378980 ARHGEF12Q9NZN5 1544 aa30.02■■■□□ 2.4
CNTFR-202ENST00000378980 CCDC7Q96M83 1385 aa29.99■■■□□ 2.39
CNTFR-202ENST00000378980 ABCC1P33527 1531 aa29.99■■■□□ 2.39
CNTFR-202ENST00000378980 CNTLNQ9NXG0 1405 aa29.98■■■□□ 2.39
CNTFR-202ENST00000378980 UHRF1BP1Q6BDS2 1440 aa29.96■■■□□ 2.39
CNTFR-202ENST00000378980 DUOX2Q9NRD8 1548 aa29.95■■■□□ 2.38
CNTFR-202ENST00000378980 C11orf95C9JLR9 678 aaPredicted RBP29.94■■■□□ 2.38
CNTFR-202ENST00000378980 ARAP3Q8WWN8 1544 aa29.94■■■□□ 2.38
CNTFR-202ENST00000378980 EFCAB2Q5VUJ9 269 aa29.94■■■□□ 2.38
CNTFR-202ENST00000378980 IQGAP3Q86VI3 1631 aa29.92■■■□□ 2.38
CNTFR-202ENST00000378980 RALGAPBQ86X10 1494 aa29.89■■■□□ 2.38
CNTFR-202ENST00000378980 ERBINQ96RT1 1412 aa29.89■■■□□ 2.37
CNTFR-202ENST00000378980 KDM5CP41229 1560 aa29.88■■■□□ 2.37
CNTFR-202ENST00000378980 WDR7Q9Y4E6 1490 aa29.88■■■□□ 2.37
CNTFR-202ENST00000378980 MAGI2Q86UL8 1455 aa29.87■■■□□ 2.37
CNTFR-202ENST00000378980 USP47Q96K76 1375 aa29.86■■■□□ 2.37
CNTFR-202ENST00000378980 ZNF326Q5BKZ1 582 aaKnown RBP29.85■■■□□ 2.37
CNTFR-202ENST00000378980 TRAPPC8Q9Y2L5 1435 aa29.85■■■□□ 2.37
CNTFR-202ENST00000378980 KIF7Q2M1P5 1343 aa29.85■■■□□ 2.37
CNTFR-202ENST00000378980 BCORL1Q5H9F3 1711 aa29.82■■■□□ 2.36
CNTFR-202ENST00000378980 ABCA9Q8IUA7 1624 aa29.8■■■□□ 2.36
CNTFR-202ENST00000378980 CCDC144AA2RUR9 1427 aa29.8■■■□□ 2.36
CNTFR-202ENST00000378980 PLA2R1Q13018 1463 aa29.79■■■□□ 2.36
CNTFR-202ENST00000378980 ZFYVE16Q7Z3T8 1539 aa29.77■■■□□ 2.36
CNTFR-202ENST00000378980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms