RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 KANK1Q14678 1352 aa14.17□□□□□ -0.14
RAD50-201ENST00000378823 RTF1Q92541 710 aaKnown RBP14.16□□□□□ -0.14
RAD50-201ENST00000378823 DCAF11Q8TEB1 546 aa14.16□□□□□ -0.14
RAD50-201ENST00000378823 SIN3AQ96ST3 1273 aa14.15□□□□□ -0.14
RAD50-201ENST00000378823 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.14
RAD50-201ENST00000378823 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
RAD50-201ENST00000378823 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
RAD50-201ENST00000378823 GZF1Q9H116 711 aaPredicted RBP14.15□□□□□ -0.15
RAD50-201ENST00000378823 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
RAD50-201ENST00000378823 CCER2I3L3R5 266 aa14.14□□□□□ -0.15
RAD50-201ENST00000378823 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
RAD50-201ENST00000378823 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
RAD50-201ENST00000378823 ISY1Q9ULR0 285 aaKnown RBP14.13□□□□□ -0.15
RAD50-201ENST00000378823 TPM4P67936 248 aa14.13□□□□□ -0.15
RAD50-201ENST00000378823 TNNT3P45378 269 aaPredicted RBP14.12□□□□□ -0.15
RAD50-201ENST00000378823 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
RAD50-201ENST00000378823 KTN1Q86UP2 1357 aaKnown RBP14.12□□□□□ -0.15
RAD50-201ENST00000378823 GOLGA6L1Q8N7Z2 621 aa14.12□□□□□ -0.15
RAD50-201ENST00000378823 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
RAD50-201ENST00000378823 CCDC34Q96HJ3 373 aa14.11□□□□□ -0.15
RAD50-201ENST00000378823 HDGFP51858 240 aaKnown RBP14.1□□□□□ -0.15
RAD50-201ENST00000378823 ARID3AQ99856 593 aa14.09□□□□□ -0.15
RAD50-201ENST00000378823 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
RAD50-201ENST00000378823 RCAN3Q9UKA8 241 aa14.09□□□□□ -0.15
RAD50-201ENST00000378823 APBB1O00213 710 aa14.08□□□□□ -0.15
RAD50-201ENST00000378823 PHF14O94880 888 aa14.08□□□□□ -0.15
RAD50-201ENST00000378823 SLKQ9H2G2 1235 aaPredicted RBP14.08□□□□□ -0.15
RAD50-201ENST00000378823 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
RAD50-201ENST00000378823 USP35Q9P2H5 1018 aa14.08□□□□□ -0.16
RAD50-201ENST00000378823 SOX12O15370 315 aa14.08□□□□□ -0.16
RAD50-201ENST00000378823 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
RAD50-201ENST00000378823 RWDD1Q9H446 243 aaPredicted RBP14.08□□□□□ -0.16
RAD50-201ENST00000378823 TCERG1O14776 1098 aaKnown RBP14.08□□□□□ -0.16
RAD50-201ENST00000378823 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
RAD50-201ENST00000378823 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
RAD50-201ENST00000378823 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
RAD50-201ENST00000378823 GOLGA6L3A6NEY3 463 aa14.06□□□□□ -0.16
RAD50-201ENST00000378823 A0A0U1RQG5 324 aaPredicted RBP14.06□□□□□ -0.16
RAD50-201ENST00000378823 PMFBP1Q8TBY8 1022 aa14.05□□□□□ -0.16
RAD50-201ENST00000378823 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
RAD50-201ENST00000378823 NACADO15069 1562 aa14.04□□□□□ -0.16
RAD50-201ENST00000378823 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
RAD50-201ENST00000378823 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
RAD50-201ENST00000378823 SETD5Q9C0A6 1442 aa14.03□□□□□ -0.16
RAD50-201ENST00000378823 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
RAD50-201ENST00000378823 TRIM6-TRIM34B2RNG4 842 aa14.02□□□□□ -0.17
RAD50-201ENST00000378823 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
RAD50-201ENST00000378823 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
RAD50-201ENST00000378823 RALBP1Q15311 655 aa14.01□□□□□ -0.17
RAD50-201ENST00000378823 SAFB2Q14151 953 aaKnown RBP eCLIP14□□□□□ -0.17
RAD50-201ENST00000378823 IPO9Q96P70 1041 aaKnown RBP14□□□□□ -0.17
RAD50-201ENST00000378823 HSP90B1P14625 803 aaKnown RBP13.99□□□□□ -0.17
RAD50-201ENST00000378823 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
RAD50-201ENST00000378823 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.17
RAD50-201ENST00000378823 GORABQ5T7V8 394 aa13.99□□□□□ -0.17
RAD50-201ENST00000378823 MFAP1P55081 439 aaKnown RBP13.98□□□□□ -0.17
RAD50-201ENST00000378823 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
RAD50-201ENST00000378823 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
RAD50-201ENST00000378823 HMMRO75330 724 aa13.98□□□□□ -0.17
RAD50-201ENST00000378823 ST18O60284 1047 aa13.97□□□□□ -0.17
RAD50-201ENST00000378823 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
RAD50-201ENST00000378823 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.17
RAD50-201ENST00000378823 STK31Q9BXU1 1019 aa13.96□□□□□ -0.17
RAD50-201ENST00000378823 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
RAD50-201ENST00000378823 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
RAD50-201ENST00000378823 PRM3Q9NNZ6 103 aa13.96□□□□□ -0.17
RAD50-201ENST00000378823 RASSF8Q8NHQ8 419 aa13.96□□□□□ -0.18
RAD50-201ENST00000378823 STK26Q9P289 416 aa13.95□□□□□ -0.18
RAD50-201ENST00000378823 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
RAD50-201ENST00000378823 KIF3AQ9Y496 699 aa13.95□□□□□ -0.18
RAD50-201ENST00000378823 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
RAD50-201ENST00000378823 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
RAD50-201ENST00000378823 TPM3P06753 285 aa13.95□□□□□ -0.18
RAD50-201ENST00000378823 HSP90AA2PQ14568 343 aaPredicted RBP13.95□□□□□ -0.18
RAD50-201ENST00000378823 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
RAD50-201ENST00000378823 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
RAD50-201ENST00000378823 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
RAD50-201ENST00000378823 CEP89Q96ST8 783 aa13.94□□□□□ -0.18
RAD50-201ENST00000378823 SETQ01105 290 aaPredicted RBP13.94□□□□□ -0.18
RAD50-201ENST00000378823 ZNF330Q9Y3S2 320 aaPredicted RBP13.93□□□□□ -0.18
RAD50-201ENST00000378823 TSR1Q2NL82 804 aaKnown RBP13.92□□□□□ -0.18
RAD50-201ENST00000378823 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
RAD50-201ENST00000378823 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
RAD50-201ENST00000378823 PKD2Q13563 968 aa13.9□□□□□ -0.18
RAD50-201ENST00000378823 GOLGA6L19H0YKK7 550 aa13.89□□□□□ -0.19
RAD50-201ENST00000378823 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
RAD50-201ENST00000378823 MLECQ14165 292 aa13.89□□□□□ -0.19
RAD50-201ENST00000378823 CENPJQ9HC77 1338 aaPredicted RBP13.88□□□□□ -0.19
RAD50-201ENST00000378823 PDE4CQ08493 712 aa13.88□□□□□ -0.19
RAD50-201ENST00000378823 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
RAD50-201ENST00000378823 ATP6V1DQ9Y5K8 247 aa13.88□□□□□ -0.19
RAD50-201ENST00000378823 TPD52L1Q16890 204 aaPredicted RBP13.88□□□□□ -0.19
RAD50-201ENST00000378823 FOXD1Q16676 465 aa13.88□□□□□ -0.19
RAD50-201ENST00000378823 H3BQV1 296 aa13.87□□□□□ -0.19
RAD50-201ENST00000378823 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
RAD50-201ENST00000378823 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
RAD50-201ENST00000378823 VPS8Q8N3P4 1428 aa13.87□□□□□ -0.19
RAD50-201ENST00000378823 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
RAD50-201ENST00000378823 CSB-PGBD3P0DP91 1061 aa13.87□□□□□ -0.19
RAD50-201ENST00000378823 CUX2O14529 1486 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms